Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:04:40 (11757): wrapper (7.7.26015): starting
06:04:40 (11757): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 06:04:40] Arguments: --nthreads 8
[2025-11-21 06:04:40] Threads: 8
[2025-11-21 06:04:40] Checking for CVMFS
[2025-11-21 06:04:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 06:04:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 06:04:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 06:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 06:04:40] 2.11.2.0 2877 51755 82200 153121 0 81 18237879 20275200 1 130560 0 11527732 99.875 2459894 26819 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 06:04:40] CVMFS is ok
[2025-11-21 06:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 06:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 06:04:40] Further information can be found at the LHC@home message board.
[2025-11-21 06:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 06:04:40] Checking for apptainer binary...
[2025-11-21 06:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 06:04:40] Running /usr/bin/apptainer --version
[2025-11-21 06:04:40] apptainer version 1.3.2-1.el7
[2025-11-21 06:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 06:04:42] c-204-32.aglt2.org
[2025-11-21 06:04:42] apptainer works
[2025-11-21 06:04:42] Set ATHENA_PROC_NUMBER=8
[2025-11-21 06:04:42] Set ATHENA_CORE_NUMBER=8
[2025-11-21 06:04:42] Starting ATLAS job with PandaID=6893887098
[2025-11-21 06:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:24:28]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:24:28] 2025-11-21 23:23:53,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:24:28] 2025-11-21 23:23:54,378 | INFO     | time since job start (44334s) is within the limit (172800.0s)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,421 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 18:24:28] 2025-11-21 23:23:55,427 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1795.75
[2025-11-21 18:24:28] 2025-11-21 23:23:55,429 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893887098/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,430 | INFO     | extracted standard info from prmon json
[2025-11-21 18:24:28] 2025-11-21 23:23:55,430 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:24:28] 2025-11-21 23:23:55,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:24:28] 2025-11-21 23:23:55,445 | INFO     | fitting pss+swap vs Time
[2025-11-21 18:24:28] 2025-11-21 23:23:55,446 | INFO     | sum of square deviations: 118655399362.044
[2025-11-21 18:24:28] 2025-11-21 23:23:55,457 | INFO     | sum of deviations: 846941384302.1284
[2025-11-21 18:24:28] 2025-11-21 23:23:55,458 | INFO     | mean x: 1763745246.1046832
[2025-11-21 18:24:28] 2025-11-21 23:23:55,458 | INFO     | mean y: 3202656.9325068872
[2025-11-21 18:24:28] 2025-11-21 23:23:55,458 | INFO     | intersect: -12586100892.030458
[2025-11-21 18:24:28] 2025-11-21 23:23:55,459 | INFO     | chi2: 6.113851227600191
[2025-11-21 18:24:28] 2025-11-21 23:23:55,460 | INFO     | sum of square deviations: 116220817837.70341
[2025-11-21 18:24:28] 2025-11-21 23:23:55,471 | INFO     | sum of deviations: 1116496166036.649
[2025-11-21 18:24:28] 2025-11-21 23:23:55,471 | INFO     | mean x: 1763745093.6088765
[2025-11-21 18:24:28] 2025-11-21 23:23:55,471 | INFO     | mean y: 3219535.367545076
[2025-11-21 18:24:28] 2025-11-21 23:23:55,471 | INFO     | intersect: -16940514569.396467
[2025-11-21 18:24:28] 2025-11-21 23:23:55,472 | INFO     | chi2: 2.930845691266166
[2025-11-21 18:24:28] 2025-11-21 23:23:55,472 | INFO     | current chi2=2.930845691266166 (change=52.06220134969522 %)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,473 | INFO     | sum of square deviations: 113819771825.83664
[2025-11-21 18:24:28] 2025-11-21 23:23:55,484 | INFO     | sum of deviations: 1174566439428.5278
[2025-11-21 18:24:28] 2025-11-21 23:23:55,484 | INFO     | mean x: 1763744941.1131284
[2025-11-21 18:24:28] 2025-11-21 23:23:55,484 | INFO     | mean y: 3223212.3268156424
[2025-11-21 18:24:28] 2025-11-21 23:23:55,485 | INFO     | intersect: -18197793907.205597
[2025-11-21 18:24:28] 2025-11-21 23:23:55,485 | INFO     | chi2: 2.6271566512952624
[2025-11-21 18:24:28] 2025-11-21 23:23:55,486 | INFO     | current chi2=2.6271566512952624 (change=10.361822898963524 %)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,486 | INFO     | right removable region: 715
[2025-11-21 18:24:28] 2025-11-21 23:23:55,487 | INFO     | sum of square deviations: 116220550047.70322
[2025-11-21 18:24:28] 2025-11-21 23:23:55,510 | INFO     | sum of deviations: 619224681325.641
[2025-11-21 18:24:28] 2025-11-21 23:23:55,510 | INFO     | mean x: 1763745398.6088765
[2025-11-21 18:24:28] 2025-11-21 23:23:55,510 | INFO     | mean y: 3216895.0873786407
[2025-11-21 18:24:28] 2025-11-21 23:23:55,510 | INFO     | intersect: -9394042728.48924
[2025-11-21 18:24:28] 2025-11-21 23:23:55,511 | INFO     | chi2: 3.6990150013145855
[2025-11-21 18:24:28] 2025-11-21 23:23:55,511 | INFO     | current chi2=3.6990150013145855 (change=39.49779175823153 %)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,512 | INFO     | sum of square deviations: 113819280349.06139
[2025-11-21 18:24:28] 2025-11-21 23:23:55,525 | INFO     | sum of deviations: 567653142838.4308
[2025-11-21 18:24:28] 2025-11-21 23:23:55,525 | INFO     | mean x: 1763745551.1117318
[2025-11-21 18:24:28] 2025-11-21 23:23:55,525 | INFO     | mean y: 3220170.532122905
[2025-11-21 18:24:28] 2025-11-21 23:23:55,526 | INFO     | intersect: -8793142819.86286
[2025-11-21 18:24:28] 2025-11-21 23:23:55,527 | INFO     | chi2: 3.6429497096264583
[2025-11-21 18:24:28] 2025-11-21 23:23:55,527 | INFO     | current chi2=3.6429497096264583 (change=1.5156816522291017 %)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,527 | INFO     | left removable region: 20
[2025-11-21 18:24:28] 2025-11-21 23:23:55,528 | INFO     | sum of square deviations: 104095611759.71637
[2025-11-21 18:24:28] 2025-11-21 23:23:55,540 | INFO     | sum of deviations: 812237660178.3424
[2025-11-21 18:24:28] 2025-11-21 23:23:55,540 | INFO     | mean x: 1763745520.620144
[2025-11-21 18:24:28] 2025-11-21 23:23:55,540 | INFO     | mean y: 3246448.1755395685
[2025-11-21 18:24:28] 2025-11-21 23:23:55,541 | INFO     | intersect: -13758914228.927353
[2025-11-21 18:24:28] 2025-11-21 23:23:55,541 | INFO     | chi2: 0.0812283993815723
[2025-11-21 18:24:28] 2025-11-21 23:23:55,542 | INFO     | current memory leak: 7.80 B/s (using 695 data points, chi2=0.08)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,542 | INFO     | could have reported an average CPU frequency of 2154 MHz (28 samples)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,543 | INFO     | ..............................
[2025-11-21 18:24:28] 2025-11-21 23:23:55,543 | INFO     | . Timing measurements:
[2025-11-21 18:24:28] 2025-11-21 23:23:55,543 | INFO     | . get job = 0 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,543 | INFO     | . initial setup = 2 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,544 | INFO     | . payload setup = 9 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,544 | INFO     | . stage-in = 0 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,544 | INFO     | . payload execution = 44291 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,544 | INFO     | . stage-out = 3 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,544 | INFO     | . log creation = 0 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,545 | INFO     | ..............................
[2025-11-21 18:24:28] 2025-11-21 23:23:55,652 | INFO     | 
[2025-11-21 18:24:28] 2025-11-21 23:23:55,653 | INFO     | job summary report
[2025-11-21 18:24:28] 2025-11-21 23:23:55,653 | INFO     | --------------------------------------------------
[2025-11-21 18:24:28] 2025-11-21 23:23:55,653 | INFO     | PanDA job id: 6893887098
[2025-11-21 18:24:28] 2025-11-21 23:23:55,653 | INFO     | task id: 47523449
[2025-11-21 18:24:28] 2025-11-21 23:23:55,653 | INFO     | errors: (none)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:24:28] 2025-11-21 23:23:55,654 | INFO     | pilot state: finished 
[2025-11-21 18:24:28] 2025-11-21 23:23:55,654 | INFO     | transexitcode: 0
[2025-11-21 18:24:28] 2025-11-21 23:23:55,654 | INFO     | exeerrorcode: 0
[2025-11-21 18:24:28] 2025-11-21 23:23:55,655 | INFO     | exeerrordiag: 
[2025-11-21 18:24:28] 2025-11-21 23:23:55,655 | INFO     | exitcode: 0
[2025-11-21 18:24:28] 2025-11-21 23:23:55,655 | INFO     | exitmsg: OK
[2025-11-21 18:24:28] 2025-11-21 23:23:55,655 | INFO     | cpuconsumptiontime: 344231 s
[2025-11-21 18:24:28] 2025-11-21 23:23:55,656 | INFO     | nevents: 1000
[2025-11-21 18:24:28] 2025-11-21 23:23:55,656 | INFO     | neventsw: 0
[2025-11-21 18:24:28] 2025-11-21 23:23:55,656 | INFO     | pid: 24083
[2025-11-21 18:24:28] 2025-11-21 23:23:55,656 | INFO     | pgrp: 24083
[2025-11-21 18:24:28] 2025-11-21 23:23:55,657 | INFO     | corecount: 8
[2025-11-21 18:24:28] 2025-11-21 23:23:55,657 | INFO     | event service: False
[2025-11-21 18:24:28] 2025-11-21 23:23:55,657 | INFO     | sizes: {0: 2298807, 1: 2298835, 6: 2299097, 11: 2299125, 44304: 2344828, 44305: 2344827, 44309: 2354005, 44312: 2354061, 44318: 2354307}
[2025-11-21 18:24:28] 2025-11-21 23:23:55,657 | INFO     | --------------------------------------------------
[2025-11-21 18:24:28] 2025-11-21 23:23:55,657 | INFO     | 
[2025-11-21 18:24:28] 2025-11-21 23:23:55,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 18:24:28] 2025-11-21 23:23:55,688 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,689 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:24:28] 2025-11-21 23:23:55,694 | INFO     | job 6893887098 has completed (purged errors)
[2025-11-21 18:24:28] 2025-11-21 23:23:55,695 | INFO     | overall cleanup function is called
[2025-11-21 18:24:28] 2025-11-21 23:23:55,759 | INFO     | PID=16013 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 18:24:28] 2025-11-21 23:23:56,720 | INFO     | --- collectZombieJob: --- 10, [24083]
[2025-11-21 18:24:28] 2025-11-21 23:23:56,721 | INFO     | zombie collector waiting for pid 24083
[2025-11-21 18:24:28] 2025-11-21 23:23:56,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:24:28] 2025-11-21 23:23:56,721 | INFO     | collected zombie processes
[2025-11-21 18:24:28] 2025-11-21 23:23:56,721 | INFO     | will attempt to kill all subprocesses of pid=24083
[2025-11-21 18:24:28] 2025-11-21 23:23:56,811 | INFO     | process IDs to be killed: [24083] (in reverse order)
[2025-11-21 18:24:28] 2025-11-21 23:23:56,867 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:24:28] 2025-11-21 23:23:56,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:24:28] 2025-11-21 23:23:56,873 | INFO     | did not find any defunct processes belonging to 24083
[2025-11-21 18:24:28] 2025-11-21 23:23:56,876 | INFO     | did not find any defunct processes belonging to 24083
[2025-11-21 18:24:28] 2025-11-21 23:23:56,879 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:24:28] 2025-11-21 23:23:56,879 | INFO     | ready for new job
[2025-11-21 18:24:28] 2025-11-21 23:23:56,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:24:28] 2025-11-21 23:23:56,883 | INFO     | ***************************************
[2025-11-21 18:24:28] 2025-11-21 23:23:56,883 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:24:28] 2025-11-21 23:23:56,883 | INFO     | ***************************************
[2025-11-21 18:24:28] 2025-11-21 23:23:56,883 | INFO     | 
[2025-11-21 18:24:28] 2025-11-21 23:23:56,884 | INFO     | architecture information:
[2025-11-21 18:24:28] 2025-11-21 23:23:56,884 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:24:28] 2025-11-21 23:23:56,902 | INFO     | cat /etc/os-release:
[2025-11-21 18:24:28] NAME="CentOS Linux"
[2025-11-21 18:24:28] VERSION="7 (Core)"
[2025-11-21 18:24:28] ID="centos"
[2025-11-21 18:24:28] ID_LIKE="rhel fedora"
[2025-11-21 18:24:28] VERSION_ID="7"
[2025-11-21 18:24:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:24:28] ANSI_COLOR="0;31"
[2025-11-21 18:24:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:24:28] HOME_URL="https://www.centos.org/"
[2025-11-21 18:24:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:24:28] 
[2025-11-21 18:24:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:24:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:24:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:24:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:24:28] 
[2025-11-21 18:24:28] 2025-11-21 23:23:56,903 | INFO     | ***************************************
[2025-11-21 18:24:28] 2025-11-21 23:23:57,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 18:24:28] 2025-11-21 23:23:57,428 | INFO     | sufficient remaining disk space (17433624576 B)
[2025-11-21 18:24:28] 2025-11-21 23:23:57,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:24:28] 2025-11-21 23:23:57,429 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:24:28] 2025-11-21 23:23:57,430 | INFO     | update_server=False
[2025-11-21 18:24:28] 2025-11-21 23:23:57,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:24:28] 2025-11-21 23:23:57,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:24:28] 2025-11-21 23:23:57,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:24:28] 2025-11-21 23:23:57,431 | INFO     | aborting loop
[2025-11-21 18:24:28] 2025-11-21 23:23:57,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:24:28] 2025-11-21 23:23:57,927 | INFO     | all payload control threads have been joined
[2025-11-21 18:24:28] 2025-11-21 23:23:58,055 | INFO     | all data control threads have been joined
[2025-11-21 18:24:28] 2025-11-21 23:23:58,436 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:58,437 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:58,437 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:58,473 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:58,608 | INFO     | all job control threads have been joined
[2025-11-21 18:24:28] 2025-11-21 23:23:58,710 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:58,933 | INFO     | [payload] control thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,058 | INFO     | [data] control thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,161 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,405 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,569 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,580 | INFO     | [job] validate thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,602 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,609 | INFO     | [job] control thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,730 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:23:59,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:24:28] 2025-11-21 23:24:03,967 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:24:08,427 | INFO     | job.realtimelogging is not enabled
[2025-11-21 18:24:28] 2025-11-21 23:24:09,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:24:28] 2025-11-21 23:24:13,824 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:24:28] 2025-11-21 23:24:15,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663414376256)>', '<ExcThread(monitor, started 139662454675200)>']
[2025-11-21 18:24:28] 2025-11-21 23:24:20,224 | INFO     | all workflow threads have been joined
[2025-11-21 18:24:28] 2025-11-21 23:24:20,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:24:28] 2025-11-21 23:24:20,229 | INFO     | traces error code: 0
[2025-11-21 18:24:28] 2025-11-21 23:24:20,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:24:28] 2025-11-21 23:24:27,882 | INFO     | PID=16013 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 18:24:28] 2025-11-21 23:24:27,883 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:24:28] 2025-11-21 23:24:27,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:24:28] 2025-11-21 23:24:27,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:24:28] 2025-11-21 23:24:27,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:24:28] 2025-11-21 23:24:27,884 | INFO     | [monitor] control thread has ended
[2025-11-21 18:24:28] 2025-11-21 23:24:27,990 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:24:28] 2025-11-21 23:24:27,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:24:28] 2025-11-21 23:24:28,000 [wrapper] pilotpid: 16013
[2025-11-21 18:24:28] 2025-11-21 23:24:28,006 [wrapper] Pilot exit status: 0
[2025-11-21 18:24:28] 2025-11-21 23:24:28,024 [wrapper] pandaids: 6893887098
[2025-11-21 18:24:28] 2025-11-21 23:24:28,072 [wrapper] cleanup supervisor_pilot  9104 16014
[2025-11-21 18:24:28] 2025-11-21 23:24:28,077 [wrapper] Test setup, not cleaning
[2025-11-21 18:24:28] 2025-11-21 23:24:28,081 [wrapper] apfmon messages muted
[2025-11-21 18:24:28] 2025-11-21 23:24:28,086 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:24:28] 2025-11-21 23:24:28,092 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:24:28]  *** Error codes and diagnostics ***
[2025-11-21 18:24:28]     "exeErrorCode": 0,
[2025-11-21 18:24:28]     "exeErrorDiag": "",
[2025-11-21 18:24:28]     "pilotErrorCode": 0,
[2025-11-21 18:24:28]     "pilotErrorDiag": "",
[2025-11-21 18:24:28]  *** Listing of results directory ***
[2025-11-21 18:24:28] total 1313300
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 18:03 pilot3.tar.gz
[2025-11-21 18:24:28] -rwx------ 1 boincer umatlas     36292 Nov 20 18:07 runpilot2-wrapper.sh
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 18:07 queuedata.json
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas       100 Nov 21 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:24:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 06:04 run_atlas
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas       105 Nov 21 06:04 job.xml
[2025-11-21 18:24:28] -rw-r--r-- 2 boincer umatlas 408785129 Nov 21 06:04 EVNT.47493127._000964.pool.root.1
[2025-11-21 18:24:28] drwxrwx--x 2 boincer umatlas      4096 Nov 21 06:04 shared
[2025-11-21 18:24:28] -rw-r--r-- 2 boincer umatlas    590096 Nov 21 06:04 input.tar.gz
[2025-11-21 18:24:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 06:04 start_atlas.sh
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas         0 Nov 21 06:04 boinc_lockfile
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas      2786 Nov 21 06:04 pandaJob.out
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas        57 Nov 21 06:04 setup.sh.local
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas    989817 Nov 21 06:04 agis_schedconf.cvmfs.json
[2025-11-21 18:24:28] drwx------ 5 boincer umatlas      4096 Nov 21 06:05 pilot3
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas       532 Nov 21 18:13 boinc_task_state.xml
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 18:20 init_data.xml
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas 915913738 Nov 21 18:23 HITS.47523449._009632.pool.root.1
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas      1061 Nov 21 18:23 memory_monitor_summary.json
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas   1526164 Nov 21 18:23 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas   1980850 Nov 21 18:23 log.47523449._009632.job.log.tgz.1
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas      8674 Nov 21 18:23 heartbeat.json
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 18:24 boinc_mmap_file
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas        29 Nov 21 18:24 wrapper_checkpoint.txt
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas       745 Nov 21 18:24 pilotlog.txt
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas        95 Nov 21 18:24 pilot_heartbeat.json
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas   6118915 Nov 21 18:24 log.47523449._009632.job.log.1
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas       353 Nov 21 18:24 output.list
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas       620 Nov 21 18:24 runtime_log
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas   8120320 Nov 21 18:24 result.tar.gz
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 18:24 runtime_log.err
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas       668 Nov 21 18:24 dDnKDmJvSg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSeIKDm3TSCWm.diag
[2025-11-21 18:24:28] -rw-r--r-- 1 boincer umatlas     21408 Nov 21 18:24 stderr.txt
[2025-11-21 18:24:28] HITS file was successfully produced:
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas 915913738 Nov 21 18:23 shared/HITS.pool.root.1
[2025-11-21 18:24:28]  *** Contents of shared directory: ***
[2025-11-21 18:24:28] total 1302188
[2025-11-21 18:24:28] -rw-r--r-- 2 boincer umatlas 408785129 Nov 21 06:04 ATLAS.root_0
[2025-11-21 18:24:28] -rw-r--r-- 2 boincer umatlas    590096 Nov 21 06:04 input.tar.gz
[2025-11-21 18:24:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 06:04 start_atlas.sh
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas 915913738 Nov 21 18:23 HITS.pool.root.1
[2025-11-21 18:24:28] -rw------- 1 boincer umatlas   8120320 Nov 21 18:24 result.tar.gz
18:24:29 (11757): run_atlas exited; CPU time 341942.482118
18:24:29 (11757): called boinc_finish(0)

</stderr_txt>
]]>

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