Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:44:27 (2548030): wrapper (7.7.26015): starting
13:44:27 (2548030): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 13:44:27] Arguments: --nthreads 3
[2025-11-27 13:44:27] Threads: 3
[2025-11-27 13:44:27] Checking for CVMFS
[2025-11-27 13:44:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 13:44:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 13:44:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 13:44:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 13:44:27] 2.12.7.0 42853 13278 66676 153364 1 81 2943105 4096001 839 130560 31 7503491 99.914 890387 509 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-11-27 13:44:27] CVMFS is ok
[2025-11-27 13:44:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 13:44:27] Checking for apptainer binary...
[2025-11-27 13:44:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 13:44:27] Running /usr/bin/apptainer --version
[2025-11-27 13:44:27] apptainer version 1.4.2
[2025-11-27 13:44:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 13:44:27] TS-P320
[2025-11-27 13:44:27] apptainer works
[2025-11-27 13:44:27] Set ATHENA_PROC_NUMBER=3
[2025-11-27 13:44:27] Set ATHENA_CORE_NUMBER=3
[2025-11-27 13:44:28] Starting ATLAS job with PandaID=6893874121
[2025-11-27 13:44:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:23:58]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:23:58] 2025-11-28 02:23:07,690 | INFO     | PID=2551735 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 03:23:58] 2025-11-28 02:23:07,690 | INFO     | .. there are 2 such processes running
[2025-11-28 03:23:58] 2025-11-28 02:23:08,136 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 03:23:58] 2025-11-28 02:23:08,137 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3999.9146249999994
[2025-11-28 03:23:58] 2025-11-28 02:23:08,137 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6893874121/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,138 | INFO     | extracted standard info from prmon json
[2025-11-28 03:23:58] 2025-11-28 02:23:08,138 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 03:23:58] 2025-11-28 02:23:08,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 03:23:58] 2025-11-28 02:23:08,143 | INFO     | fitting pss+swap vs Time
[2025-11-28 03:23:58] 2025-11-28 02:23:08,143 | INFO     | sum of square deviations: 161757834946.9987
[2025-11-28 03:23:58] 2025-11-28 02:23:08,149 | INFO     | sum of deviations: 225278775001.63373
[2025-11-28 03:23:58] 2025-11-28 02:23:08,149 | INFO     | mean x: 1764272015.0012422
[2025-11-28 03:23:58] 2025-11-28 02:23:08,149 | INFO     | mean y: 2199227.366459627
[2025-11-28 03:23:58] 2025-11-28 02:23:08,149 | INFO     | intersect: -2454887555.7211885
[2025-11-28 03:23:58] 2025-11-28 02:23:08,150 | INFO     | chi2: 2.3838108248901873
[2025-11-28 03:23:58] 2025-11-28 02:23:08,150 | INFO     | sum of square deviations: 158762393041.99863
[2025-11-28 03:23:58] 2025-11-28 02:23:08,156 | INFO     | sum of deviations: 317310173201.02844
[2025-11-28 03:23:58] 2025-11-28 02:23:08,156 | INFO     | mean x: 1764271862.50125
[2025-11-28 03:23:58] 2025-11-28 02:23:08,156 | INFO     | mean y: 2203900.47125
[2025-11-28 03:23:58] 2025-11-28 02:23:08,156 | INFO     | intersect: -3523954905.3857446
[2025-11-28 03:23:58] 2025-11-28 02:23:08,156 | INFO     | chi2: 1.3653733851896417
[2025-11-28 03:23:58] 2025-11-28 02:23:08,157 | INFO     | current chi2=1.3653733851896417 (change=42.72308142352114 %)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,157 | INFO     | sum of square deviations: 155804161136.99826
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | sum of deviations: 313198275073.48315
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | mean x: 1764271710.001258
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | mean y: 2203688.516981132
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | intersect: -3544343799.694631
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | chi2: 1.365351731811501
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | current chi2=1.365351731811501 (change=0.0015858942598140494 %)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,163 | INFO     | right removable region: 794
[2025-11-28 03:23:58] 2025-11-28 02:23:08,164 | INFO     | sum of square deviations: 158762392431.99866
[2025-11-28 03:23:58] 2025-11-28 02:23:08,170 | INFO     | sum of deviations: 141369594946.8774
[2025-11-28 03:23:58] 2025-11-28 02:23:08,170 | INFO     | mean x: 1764272167.50125
[2025-11-28 03:23:58] 2025-11-28 02:23:08,170 | INFO     | mean y: 2203483.1225
[2025-11-28 03:23:58] 2025-11-28 02:23:08,170 | INFO     | intersect: -1568788474.576366
[2025-11-28 03:23:58] 2025-11-28 02:23:08,170 | INFO     | chi2: 1.1896980587285169
[2025-11-28 03:23:58] 2025-11-28 02:23:08,170 | INFO     | current chi2=1.1896980587285169 (change=50.09259768826993 %)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,171 | INFO     | sum of square deviations: 155804159916.99826
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | sum of deviations: 142162199951.9796
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | mean x: 1764272320.001258
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | mean y: 2203442.0201257863
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | intersect: -1607592050.3427072
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | chi2: 1.188462828654818
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | current chi2=1.188462828654818 (change=0.10382719082680537 %)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,177 | INFO     | left removable region: 20
[2025-11-28 03:23:58] 2025-11-28 02:23:08,178 | INFO     | sum of square deviations: 143780669425.49857
[2025-11-28 03:23:58] 2025-11-28 02:23:08,183 | INFO     | sum of deviations: 237269571265.09308
[2025-11-28 03:23:58] 2025-11-28 02:23:08,183 | INFO     | mean x: 1764272289.501292
[2025-11-28 03:23:58] 2025-11-28 02:23:08,183 | INFO     | mean y: 2207550.906976744
[2025-11-28 03:23:58] 2025-11-28 02:23:08,183 | INFO     | intersect: -2909227841.607744
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | chi2: 0.15427662161710815
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | current memory leak: 1.65 B/s (using 774 data points, chi2=0.15)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | could have reported an average CPU frequency of 4000 MHz (31 samples)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | ..............................
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . Timing measurements:
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . get job = 0 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . initial setup = 1 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . payload setup = 3 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . stage-in = 0 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . payload execution = 49088 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . stage-out = 1 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | . log creation = 0 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,184 | INFO     | ..............................
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | 
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | job summary report
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | --------------------------------------------------
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | PanDA job id: 6893874121
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | task id: 47523449
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | errors: (none)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | pilot state: finished 
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | transexitcode: 0
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | exeerrorcode: 0
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | exeerrordiag: 
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | exitcode: 0
[2025-11-28 03:23:58] 2025-11-28 02:23:08,595 | INFO     | exitmsg: OK
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | cpuconsumptiontime: 146733 s
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | nevents: 1000
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | neventsw: 0
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | pid: 2558153
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | pgrp: 2558153
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | corecount: 3
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | event service: False
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | sizes: {0: 2284263, 2: 2284525, 11: 2284553, 49094: 2333049, 49095: 2333048, 49096: 2342126, 49099: 2342310, 49101: 2342556}
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | --------------------------------------------------
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | 
[2025-11-28 03:23:58] 2025-11-28 02:23:08,596 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-28 03:23:58] 2025-11-28 02:23:08,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | job 6893874121 has completed (purged errors)
[2025-11-28 03:23:58] 2025-11-28 02:23:08,607 | INFO     | overall cleanup function is called
[2025-11-28 03:23:58] 2025-11-28 02:23:09,616 | INFO     | --- collectZombieJob: --- 10, [2558153]
[2025-11-28 03:23:58] 2025-11-28 02:23:09,616 | INFO     | zombie collector waiting for pid 2558153
[2025-11-28 03:23:58] 2025-11-28 02:23:09,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 03:23:58] 2025-11-28 02:23:09,617 | INFO     | collected zombie processes
[2025-11-28 03:23:58] 2025-11-28 02:23:09,617 | INFO     | will attempt to kill all subprocesses of pid=2558153
[2025-11-28 03:23:58] 2025-11-28 02:23:09,673 | INFO     | process IDs to be killed: [2558153] (in reverse order)
[2025-11-28 03:23:58] 2025-11-28 02:23:09,692 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 03:23:58] 2025-11-28 02:23:09,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 03:23:58] 2025-11-28 02:23:09,694 | INFO     | did not find any defunct processes belonging to 2558153
[2025-11-28 03:23:58] 2025-11-28 02:23:09,695 | INFO     | did not find any defunct processes belonging to 2558153
[2025-11-28 03:23:58] 2025-11-28 02:23:09,696 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 03:23:58] 2025-11-28 02:23:09,696 | INFO     | ready for new job
[2025-11-28 03:23:58] 2025-11-28 02:23:09,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 03:23:58] 2025-11-28 02:23:09,698 | INFO     | ***************************************
[2025-11-28 03:23:58] 2025-11-28 02:23:09,698 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 03:23:58] 2025-11-28 02:23:09,698 | INFO     | ***************************************
[2025-11-28 03:23:58] 2025-11-28 02:23:09,698 | INFO     | 
[2025-11-28 03:23:58] 2025-11-28 02:23:09,698 | INFO     | architecture information:
[2025-11-28 03:23:58] 2025-11-28 02:23:09,699 | INFO     | executing command: cat /etc/os-release
[2025-11-28 03:23:58] 2025-11-28 02:23:09,705 | INFO     | cat /etc/os-release:
[2025-11-28 03:23:58] NAME="CentOS Linux"
[2025-11-28 03:23:58] VERSION="7 (Core)"
[2025-11-28 03:23:58] ID="centos"
[2025-11-28 03:23:58] ID_LIKE="rhel fedora"
[2025-11-28 03:23:58] VERSION_ID="7"
[2025-11-28 03:23:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 03:23:58] ANSI_COLOR="0;31"
[2025-11-28 03:23:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 03:23:58] HOME_URL="https://www.centos.org/"
[2025-11-28 03:23:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 03:23:58] 
[2025-11-28 03:23:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 03:23:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 03:23:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 03:23:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 03:23:58] 
[2025-11-28 03:23:58] 2025-11-28 02:23:09,705 | INFO     | ***************************************
[2025-11-28 03:23:58] 2025-11-28 02:23:10,208 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-28 03:23:58] 2025-11-28 02:23:10,216 | INFO     | sufficient remaining disk space (191855853568 B)
[2025-11-28 03:23:58] 2025-11-28 02:23:10,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 03:23:58] 2025-11-28 02:23:10,216 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 03:23:58] 2025-11-28 02:23:10,216 | INFO     | update_server=False
[2025-11-28 03:23:58] 2025-11-28 02:23:10,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 03:23:58] 2025-11-28 02:23:10,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:23:58] 2025-11-28 02:23:10,333 | INFO     | all data control threads have been joined
[2025-11-28 03:23:58] 2025-11-28 02:23:10,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 03:23:58] 2025-11-28 02:23:10,736 | INFO     | all job control threads have been joined
[2025-11-28 03:23:58] 2025-11-28 02:23:10,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:23:58] 2025-11-28 02:23:10,882 | INFO     | aborting loop
[2025-11-28 03:23:58] 2025-11-28 02:23:11,221 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,221 | INFO     | [job] retrieve thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,338 | INFO     | [data] control thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,339 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,528 | INFO     | all payload control threads have been joined
[2025-11-28 03:23:58] 2025-11-28 02:23:11,572 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,741 | INFO     | [job] control thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,869 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,887 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:11,926 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:12,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 03:23:58] 2025-11-28 02:23:12,135 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:12,302 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:12,533 | INFO     | [payload] control thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:12,569 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:12,717 | INFO     | [job] validate thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:12,725 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:16,037 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:23:58] 2025-11-28 02:23:38,756 | INFO     | 49116s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 03:23:58] 2025-11-28 02:23:39,807 | INFO     | PID=2551735 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 03:23:58] 2025-11-28 02:23:39,807 | INFO     | .. there are 2 such processes running
[2025-11-28 03:23:58] 2025-11-28 02:23:39,807 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:23:58] 2025-11-28 02:23:39,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:23:58] 2025-11-28 02:23:39,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:23:58] 2025-11-28 02:23:52,883 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:23:58] 2025-11-28 02:23:52,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427080210240)>', '<ExcThread(monitor, started 140426723956480)>']
[2025-11-28 03:23:58] 2025-11-28 02:23:53,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:23:58] 2025-11-28 02:23:53,872 | INFO     | [monitor] control thread has ended
[2025-11-28 03:23:58] 2025-11-28 02:23:57,945 | INFO     | all workflow threads have been joined
[2025-11-28 03:23:58] 2025-11-28 02:23:57,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:23:58] 2025-11-28 02:23:57,946 | INFO     | traces error code: 0
[2025-11-28 03:23:58] 2025-11-28 02:23:57,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:23:58] 2025-11-28 02:23:58,000 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:23:58] 2025-11-28 02:23:58,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:23:58] 2025-11-28 02:23:58,003 [wrapper] pilotpid: 2551735
[2025-11-28 03:23:58] 2025-11-28 02:23:58,004 [wrapper] Pilot exit status: 0
[2025-11-28 03:23:58] 2025-11-28 02:23:58,008 [wrapper] pandaids: 6893874121
[2025-11-28 03:23:58] 2025-11-28 02:23:58,021 [wrapper] cleanup supervisor_pilot 2718074 2551736
[2025-11-28 03:23:58] 2025-11-28 02:23:58,022 [wrapper] Test setup, not cleaning
[2025-11-28 03:23:58] 2025-11-28 02:23:58,023 [wrapper] apfmon messages muted
[2025-11-28 03:23:58] 2025-11-28 02:23:58,025 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:23:58] 2025-11-28 02:23:58,026 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:23:58]  *** Error codes and diagnostics ***
[2025-11-28 03:23:58]     "exeErrorCode": 0,
[2025-11-28 03:23:58]     "exeErrorDiag": "",
[2025-11-28 03:23:58]     "pilotErrorCode": 0,
[2025-11-28 03:23:58]     "pilotErrorDiag": "",
[2025-11-28 03:23:58]  *** Listing of results directory ***
[2025-11-28 03:23:58] insgesamt 1316928
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc    576529 20. Nov 16:07 pilot3.tar.gz
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc      5112 20. Nov 16:33 queuedata.json
[2025-11-28 03:23:58] -rwx------ 1 boinc boinc     36292 20. Nov 16:33 runpilot2-wrapper.sh
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc       100 27. Nov 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:23:58] -rwxr-xr-x 1 boinc boinc      7986 27. Nov 13:44 run_atlas
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc       105 27. Nov 13:44 job.xml
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc      9829 27. Nov 13:44 init_data.xml
[2025-11-28 03:23:58] -rw-r--r-- 2 boinc boinc 409832576 27. Nov 13:44 EVNT.47493127._000701.pool.root.1
[2025-11-28 03:23:58] drwxrwx--x 2 boinc boinc      4096 27. Nov 13:44 shared
[2025-11-28 03:23:58] -rw-r--r-- 2 boinc boinc    590106 27. Nov 13:44 input.tar.gz
[2025-11-28 03:23:58] -rw-r--r-- 2 boinc boinc     15847 27. Nov 13:44 start_atlas.sh
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc         0 27. Nov 13:44 boinc_lockfile
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc      2784 27. Nov 13:44 pandaJob.out
[2025-11-28 03:23:58] -rw------- 1 boinc boinc        52 27. Nov 13:44 setup.sh.local
[2025-11-28 03:23:58] -rw------- 1 boinc boinc    991566 27. Nov 13:44 agis_schedconf.cvmfs.json
[2025-11-28 03:23:58] drwx------ 5 boinc boinc      4096 27. Nov 13:44 pilot3
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc       532 28. Nov 03:18 boinc_task_state.xml
[2025-11-28 03:23:58] -rw------- 1 boinc boinc 917917862 28. Nov 03:22 HITS.47523449._007005.pool.root.1
[2025-11-28 03:23:58] -rw------- 1 boinc boinc      1025 28. Nov 03:22 memory_monitor_summary.json
[2025-11-28 03:23:58] -rw------- 1 boinc boinc   1516240 28. Nov 03:23 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:23:58] -rw------- 1 boinc boinc   1419691 28. Nov 03:23 log.47523449._007005.job.log.tgz.1
[2025-11-28 03:23:58] -rw------- 1 boinc boinc        95 28. Nov 03:23 pilot_heartbeat.json
[2025-11-28 03:23:58] -rw------- 1 boinc boinc      8580 28. Nov 03:23 heartbeat.json
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc      8192 28. Nov 03:23 boinc_mmap_file
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc        29 28. Nov 03:23 wrapper_checkpoint.txt
[2025-11-28 03:23:58] -rw------- 1 boinc boinc      4940 28. Nov 03:23 pilotlog.txt
[2025-11-28 03:23:58] -rw------- 1 boinc boinc   7008161 28. Nov 03:23 log.47523449._007005.job.log.1
[2025-11-28 03:23:58] -rw------- 1 boinc boinc       353 28. Nov 03:23 output.list
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc       620 28. Nov 03:23 runtime_log
[2025-11-28 03:23:58] -rw------- 1 boinc boinc   8448000 28. Nov 03:23 result.tar.gz
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc      9275 28. Nov 03:23 runtime_log.err
[2025-11-28 03:23:58] -rw------- 1 boinc boinc       651 28. Nov 03:23 cgMMDm4pLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7EIKDmWA9OBo.diag
[2025-11-28 03:23:58] -rw-r--r-- 1 boinc boinc     21083 28. Nov 03:23 stderr.txt
[2025-11-28 03:23:58] HITS file was successfully produced:
[2025-11-28 03:23:58] -rw------- 1 boinc boinc 917917862 28. Nov 03:22 shared/HITS.pool.root.1
[2025-11-28 03:23:58]  *** Contents of shared directory: ***
[2025-11-28 03:23:58] insgesamt 1305492
[2025-11-28 03:23:58] -rw-r--r-- 2 boinc boinc 409832576 27. Nov 13:44 ATLAS.root_0
[2025-11-28 03:23:58] -rw-r--r-- 2 boinc boinc    590106 27. Nov 13:44 input.tar.gz
[2025-11-28 03:23:58] -rw-r--r-- 2 boinc boinc     15847 27. Nov 13:44 start_atlas.sh
[2025-11-28 03:23:58] -rw------- 1 boinc boinc 917917862 28. Nov 03:22 HITS.pool.root.1
[2025-11-28 03:23:58] -rw------- 1 boinc boinc   8448000 28. Nov 03:23 result.tar.gz
03:23:59 (2548030): run_atlas exited; CPU time 146968.802794
03:23:59 (2548030): called boinc_finish(0)

</stderr_txt>
]]>

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