Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:22 (2884429): wrapper (7.7.26015): starting
06:40:22 (2884429): wrapper: running run_atlas (--nthreads 2)
[2025-11-24 06:40:22] Arguments: --nthreads 2
[2025-11-24 06:40:22] Threads: 2
[2025-11-24 06:40:22] Checking for CVMFS
[2025-11-24 06:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:40:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:40:23] 2.9.2.0 1943952 8030 57896 153235 0 81 31745725 36864000 0 130560 0 2596470 99.904 453498 6716 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 06:40:23] CVMFS is ok
[2025-11-24 06:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:40:23] Further information can be found at the LHC@home message board.
[2025-11-24 06:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:40:23] Checking for apptainer binary...
[2025-11-24 06:40:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:40:23] Running /usr/bin/apptainer --version
[2025-11-24 06:40:23] apptainer version 1.4.1-1.1
[2025-11-24 06:40:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:40:23] madmaxA277a
[2025-11-24 06:40:23] apptainer works
[2025-11-24 06:40:23] Set ATHENA_PROC_NUMBER=2
[2025-11-24 06:40:23] Set ATHENA_CORE_NUMBER=2
[2025-11-24 06:40:23] Starting ATLAS job with PandaID=6893886021
[2025-11-24 06:40:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:45:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:45:49] 2025-11-24 17:45:18,092 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:45:49] 2025-11-24 17:45:18,092 | INFO     | ***************************************
[2025-11-24 18:45:49] 2025-11-24 17:45:18,092 | INFO     | 
[2025-11-24 18:45:49] 2025-11-24 17:45:18,092 | INFO     | architecture information:
[2025-11-24 18:45:49] 2025-11-24 17:45:18,093 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:45:49] 2025-11-24 17:45:18,101 | INFO     | cat /etc/os-release:
[2025-11-24 18:45:49] NAME="CentOS Linux"
[2025-11-24 18:45:49] VERSION="7 (Core)"
[2025-11-24 18:45:49] ID="centos"
[2025-11-24 18:45:49] ID_LIKE="rhel fedora"
[2025-11-24 18:45:49] VERSION_ID="7"
[2025-11-24 18:45:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:45:49] ANSI_COLOR="0;31"
[2025-11-24 18:45:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:45:49] HOME_URL="https://www.centos.org/"
[2025-11-24 18:45:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:45:49] 
[2025-11-24 18:45:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:45:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:45:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:45:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:45:49] 
[2025-11-24 18:45:49] 2025-11-24 17:45:18,101 | INFO     | ***************************************
[2025-11-24 18:45:49] 2025-11-24 17:45:18,604 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 18:45:49] 2025-11-24 17:45:18,616 | INFO     | sufficient remaining disk space (484140122112 B)
[2025-11-24 18:45:49] 2025-11-24 17:45:18,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:45:49] 2025-11-24 17:45:18,616 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:45:49] 2025-11-24 17:45:18,616 | INFO     | update_server=False
[2025-11-24 18:45:49] 2025-11-24 17:45:18,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:45:49] 2025-11-24 17:45:18,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:45:49] 2025-11-24 17:45:19,006 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 18:45:49] 2025-11-24 17:45:19,006 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 18:45:49] 2025-11-24 17:45:19,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:45:49] 2025-11-24 17:45:19,006 | INFO     | will abort loop
[2025-11-24 18:45:49] 2025-11-24 17:45:19,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:45:49] 2025-11-24 17:45:19,097 | INFO     | all data control threads have been joined
[2025-11-24 18:45:49] 2025-11-24 17:45:19,618 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:19,621 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:19,624 | INFO     | all job control threads have been joined
[2025-11-24 18:45:49] 2025-11-24 17:45:19,639 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:19,684 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:19,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:45:49] 2025-11-24 17:45:19,794 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:19,799 | INFO     | all payload control threads have been joined
[2025-11-24 18:45:49] 2025-11-24 17:45:20,012 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,103 | INFO     | [data] control thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,256 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,518 | INFO     | [job] validate thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,630 | INFO     | [job] control thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,676 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,805 | INFO     | [payload] control thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:20,865 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:21,776 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:23,058 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:45:49] 2025-11-24 17:45:37,259 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:45:49] 2025-11-24 17:45:38,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746810787648)>', '<ExcThread(monitor, started 139746315577088)>']
[2025-11-24 18:45:49] 2025-11-24 17:45:43,610 | INFO     | all workflow threads have been joined
[2025-11-24 18:45:49] 2025-11-24 17:45:43,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:45:49] 2025-11-24 17:45:43,611 | INFO     | traces error code: 0
[2025-11-24 18:45:49] 2025-11-24 17:45:43,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:45:49] 2025-11-24 17:45:49,286 | INFO     | PID=2888136 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 18:45:49] 2025-11-24 17:45:49,286 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:45:49] 2025-11-24 17:45:49,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:45:49] 2025-11-24 17:45:49,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:45:49] 2025-11-24 17:45:49,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:45:49] 2025-11-24 17:45:49,286 | INFO     | [monitor] control thread has ended
[2025-11-24 18:45:49] 2025-11-24 17:45:49,325 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:45:49] 2025-11-24 17:45:49,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:45:49] 2025-11-24 17:45:49,329 [wrapper] pilotpid: 2888136
[2025-11-24 18:45:49] 2025-11-24 17:45:49,331 [wrapper] Pilot exit status: 0
[2025-11-24 18:45:49] 2025-11-24 17:45:49,337 [wrapper] pandaids: 6893886021
[2025-11-24 18:45:49] 2025-11-24 17:45:49,349 [wrapper] cleanup supervisor_pilot 2965235 2888137
[2025-11-24 18:45:49] 2025-11-24 17:45:49,351 [wrapper] Test setup, not cleaning
[2025-11-24 18:45:49] 2025-11-24 17:45:49,353 [wrapper] apfmon messages muted
[2025-11-24 18:45:49] 2025-11-24 17:45:49,355 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:45:49] 2025-11-24 17:45:49,357 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:45:49]  *** Error codes and diagnostics ***
[2025-11-24 18:45:49]     "exeErrorCode": 0,
[2025-11-24 18:45:49]     "exeErrorDiag": "",
[2025-11-24 18:45:49]     "pilotErrorCode": 0,
[2025-11-24 18:45:49]     "pilotErrorDiag": "",
[2025-11-24 18:45:49]  *** Listing of results directory ***
[2025-11-24 18:45:49] total 1311252
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc      5112 Nov 20 23:26 queuedata.json
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc    576529 Nov 20 23:26 pilot3.tar.gz
[2025-11-24 18:45:49] -rwx------ 1 boinc boinc     36292 Nov 20 23:27 runpilot2-wrapper.sh
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc       100 Nov 24 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:45:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 06:40 run_atlas
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc       105 Nov 24 06:40 job.xml
[2025-11-24 18:45:49] -rw-r--r-- 2 boinc boinc 410979323 Nov 24 06:40 EVNT.47493127._000948.pool.root.1
[2025-11-24 18:45:49] -rw-r--r-- 2 boinc boinc    590098 Nov 24 06:40 input.tar.gz
[2025-11-24 18:45:49] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:40 start_atlas.sh
[2025-11-24 18:45:49] drwxrwx--x 2 boinc boinc      4096 Nov 24 06:40 shared
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:40 boinc_setup_complete
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc      6210 Nov 24 06:40 init_data.xml
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:40 boinc_lockfile
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc      2786 Nov 24 06:40 pandaJob.out
[2025-11-24 18:45:49] -rw------- 1 boinc boinc    989786 Nov 24 06:40 agis_schedconf.cvmfs.json
[2025-11-24 18:45:49] drwx------ 5 boinc boinc      4096 Nov 24 06:40 pilot3
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc       531 Nov 24 18:41 boinc_task_state.xml
[2025-11-24 18:45:49] -rw------- 1 boinc boinc 913217095 Nov 24 18:44 HITS.47523449._009477.pool.root.1
[2025-11-24 18:45:49] -rw------- 1 boinc boinc        95 Nov 24 18:44 pilot_heartbeat.json
[2025-11-24 18:45:49] -rw------- 1 boinc boinc      1025 Nov 24 18:44 memory_monitor_summary.json
[2025-11-24 18:45:49] -rw------- 1 boinc boinc   1516227 Nov 24 18:44 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:45:49] -rw------- 1 boinc boinc   1208407 Nov 24 18:45 log.47523449._009477.job.log.tgz.1
[2025-11-24 18:45:49] -rw------- 1 boinc boinc      8569 Nov 24 18:45 heartbeat.json
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc      8192 Nov 24 18:45 boinc_mmap_file
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc        28 Nov 24 18:45 wrapper_checkpoint.txt
[2025-11-24 18:45:49] -rw------- 1 boinc boinc       747 Nov 24 18:45 pilotlog.txt
[2025-11-24 18:45:49] -rw------- 1 boinc boinc   6104239 Nov 24 18:45 log.47523449._009477.job.log.1
[2025-11-24 18:45:49] -rw------- 1 boinc boinc       353 Nov 24 18:45 output.list
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc       620 Nov 24 18:45 runtime_log
[2025-11-24 18:45:49] -rw------- 1 boinc boinc   7331840 Nov 24 18:45 result.tar.gz
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc      8923 Nov 24 18:45 runtime_log.err
[2025-11-24 18:45:49] -rw------- 1 boinc boinc       670 Nov 24 18:45 9EiKDmRISg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5cIKDmFssRSo.diag
[2025-11-24 18:45:49] -rw-r--r-- 1 boinc boinc      9463 Nov 24 18:45 stderr.txt
[2025-11-24 18:45:49] HITS file was successfully produced:
[2025-11-24 18:45:49] -rw------- 1 boinc boinc 913217095 Nov 24 18:44 shared/HITS.pool.root.1
[2025-11-24 18:45:49]  *** Contents of shared directory: ***
[2025-11-24 18:45:49] total 1300928
[2025-11-24 18:45:49] -rw-r--r-- 2 boinc boinc 410979323 Nov 24 06:40 ATLAS.root_0
[2025-11-24 18:45:49] -rw-r--r-- 2 boinc boinc    590098 Nov 24 06:40 input.tar.gz
[2025-11-24 18:45:49] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:40 start_atlas.sh
[2025-11-24 18:45:49] -rw------- 1 boinc boinc 913217095 Nov 24 18:44 HITS.pool.root.1
[2025-11-24 18:45:49] -rw------- 1 boinc boinc   7331840 Nov 24 18:45 result.tar.gz
18:45:50 (2884429): run_atlas exited; CPU time 86157.942110
18:45:50 (2884429): called boinc_finish(0)

</stderr_txt>
]]>

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