Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:29:08 (24837): wrapper (7.7.26015): starting
05:29:08 (24837): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 05:29:08] Arguments: --nthreads 8
[2025-11-21 05:29:08] Threads: 8
[2025-11-21 05:29:08] Checking for CVMFS
[2025-11-21 05:29:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:29:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:29:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:29:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:29:09] 2.11.2.0 2822 65980 83928 153121 3 81 20084688 20275200 1 130560 0 18215968 99.855 3976332 31478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 05:29:09] CVMFS is ok
[2025-11-21 05:29:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:29:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 05:29:09] Further information can be found at the LHC@home message board.
[2025-11-21 05:29:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:29:09] Checking for apptainer binary...
[2025-11-21 05:29:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 05:29:09] Running /usr/bin/apptainer --version
[2025-11-21 05:29:09] apptainer version 1.3.2-1.el7
[2025-11-21 05:29:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:29:10] c-204-37.aglt2.org
[2025-11-21 05:29:10] apptainer works
[2025-11-21 05:29:11] Set ATHENA_PROC_NUMBER=8
[2025-11-21 05:29:11] Set ATHENA_CORE_NUMBER=8
[2025-11-21 05:29:11] Starting ATLAS job with PandaID=6892548604
[2025-11-21 05:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:07:55]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:07:55] 2025-11-21 23:07:19,646 | INFO     | time since job start (45471s) is within the limit (172800.0s)
[2025-11-21 18:07:55] 2025-11-21 23:07:21,652 | INFO     | time since job start (45473s) is within the limit (172800.0s)
[2025-11-21 18:07:55] 2025-11-21 23:07:21,975 | INFO     | monitor loop #3309: job 0:6892548604 is in state 'finished'
[2025-11-21 18:07:55] 2025-11-21 23:07:21,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,002 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 18:07:55] 2025-11-21 23:07:23,006 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-21 18:07:55] 2025-11-21 23:07:23,008 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892548604/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,009 | INFO     | extracted standard info from prmon json
[2025-11-21 18:07:55] 2025-11-21 23:07:23,009 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:07:55] 2025-11-21 23:07:23,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:07:55] 2025-11-21 23:07:23,021 | INFO     | fitting pss+swap vs Time
[2025-11-21 18:07:55] 2025-11-21 23:07:23,022 | INFO     | sum of square deviations: 128216813954.00806
[2025-11-21 18:07:55] 2025-11-21 23:07:23,033 | INFO     | sum of deviations: 782663271652.6305
[2025-11-21 18:07:55] 2025-11-21 23:07:23,033 | INFO     | mean x: 1763743693.628188
[2025-11-21 18:07:55] 2025-11-21 23:07:23,033 | INFO     | mean y: 2873284.2080536913
[2025-11-21 18:07:55] 2025-11-21 23:07:23,033 | INFO     | intersect: -10763401177.321571
[2025-11-21 18:07:55] 2025-11-21 23:07:23,034 | INFO     | chi2: 5.361793090813813
[2025-11-21 18:07:55] 2025-11-21 23:07:23,035 | INFO     | sum of square deviations: 125652685357.02174
[2025-11-21 18:07:55] 2025-11-21 23:07:23,046 | INFO     | sum of deviations: 993612985963.8176
[2025-11-21 18:07:55] 2025-11-21 23:07:23,046 | INFO     | mean x: 1763743541.1324325
[2025-11-21 18:07:55] 2025-11-21 23:07:23,047 | INFO     | mean y: 2885823.8283783784
[2025-11-21 18:07:55] 2025-11-21 23:07:23,047 | INFO     | intersect: -13944118025.708223
[2025-11-21 18:07:55] 2025-11-21 23:07:23,047 | INFO     | chi2: 3.0416535061052423
[2025-11-21 18:07:55] 2025-11-21 23:07:23,048 | INFO     | current chi2=3.0416535061052423 (change=43.27171051571518 %)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,048 | INFO     | sum of square deviations: 123122976010.00809
[2025-11-21 18:07:55] 2025-11-21 23:07:23,060 | INFO     | sum of deviations: 1080765969955.1989
[2025-11-21 18:07:55] 2025-11-21 23:07:23,060 | INFO     | mean x: 1763743388.6367347
[2025-11-21 18:07:55] 2025-11-21 23:07:23,060 | INFO     | mean y: 2891068.2666666666
[2025-11-21 18:07:55] 2025-11-21 23:07:23,060 | INFO     | intersect: -15479140766.450392
[2025-11-21 18:07:55] 2025-11-21 23:07:23,061 | INFO     | chi2: 2.484438201276379
[2025-11-21 18:07:55] 2025-11-21 23:07:23,061 | INFO     | current chi2=2.484438201276379 (change=18.31948654606497 %)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,061 | INFO     | right removable region: 734
[2025-11-21 18:07:55] 2025-11-21 23:07:23,062 | INFO     | sum of square deviations: 125652399877.02177
[2025-11-21 18:07:55] 2025-11-21 23:07:23,073 | INFO     | sum of deviations: 579442501693.781
[2025-11-21 18:07:55] 2025-11-21 23:07:23,073 | INFO     | mean x: 1763743846.1324325
[2025-11-21 18:07:55] 2025-11-21 23:07:23,074 | INFO     | mean y: 2885348.4716216214
[2025-11-21 18:07:55] 2025-11-21 23:07:23,074 | INFO     | intersect: -8130569703.3238535
[2025-11-21 18:07:55] 2025-11-21 23:07:23,074 | INFO     | chi2: 3.0664294244248755
[2025-11-21 18:07:55] 2025-11-21 23:07:23,075 | INFO     | current chi2=3.0664294244248755 (change=42.809627815021614 %)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,075 | INFO     | sum of square deviations: 123122540104.81627
[2025-11-21 18:07:55] 2025-11-21 23:07:23,086 | INFO     | sum of deviations: 535082474621.14343
[2025-11-21 18:07:55] 2025-11-21 23:07:23,087 | INFO     | mean x: 1763743998.632653
[2025-11-21 18:07:55] 2025-11-21 23:07:23,087 | INFO     | mean y: 2888021.419047619
[2025-11-21 18:07:55] 2025-11-21 23:07:23,087 | INFO     | intersect: -7662227582.784064
[2025-11-21 18:07:55] 2025-11-21 23:07:23,088 | INFO     | chi2: 3.0179718192474323
[2025-11-21 18:07:55] 2025-11-21 23:07:23,088 | INFO     | current chi2=3.0179718192474323 (change=1.580261550827367 %)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,088 | INFO     | left removable region: 20
[2025-11-21 18:07:55] 2025-11-21 23:07:23,089 | INFO     | sum of square deviations: 112867975978.85152
[2025-11-21 18:07:55] 2025-11-21 23:07:23,099 | INFO     | sum of deviations: 787505695836.4788
[2025-11-21 18:07:55] 2025-11-21 23:07:23,099 | INFO     | mean x: 1763743968.1456583
[2025-11-21 18:07:55] 2025-11-21 23:07:23,099 | INFO     | mean y: 2909790.331932773
[2025-11-21 18:07:55] 2025-11-21 23:07:23,100 | INFO     | intersect: -12303135470.656828
[2025-11-21 18:07:55] 2025-11-21 23:07:23,100 | INFO     | chi2: 0.09711865766122615
[2025-11-21 18:07:55] 2025-11-21 23:07:23,100 | INFO     | current memory leak: 6.98 B/s (using 714 data points, chi2=0.10)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,101 | INFO     | could have reported an average CPU frequency of 2171 MHz (28 samples)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,101 | INFO     | ..............................
[2025-11-21 18:07:55] 2025-11-21 23:07:23,101 | INFO     | . Timing measurements:
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . get job = 0 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . initial setup = 2 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . payload setup = 8 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . stage-in = 0 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . payload execution = 45431 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . stage-out = 3 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | . log creation = 0 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,102 | INFO     | ..............................
[2025-11-21 18:07:55] 2025-11-21 23:07:23,194 | INFO     | 
[2025-11-21 18:07:55] 2025-11-21 23:07:23,194 | INFO     | job summary report
[2025-11-21 18:07:55] 2025-11-21 23:07:23,194 | INFO     | --------------------------------------------------
[2025-11-21 18:07:55] 2025-11-21 23:07:23,194 | INFO     | PanDA job id: 6892548604
[2025-11-21 18:07:55] 2025-11-21 23:07:23,195 | INFO     | task id: 47493029
[2025-11-21 18:07:55] 2025-11-21 23:07:23,195 | INFO     | errors: (none)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,195 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:07:55] 2025-11-21 23:07:23,195 | INFO     | pilot state: finished 
[2025-11-21 18:07:55] 2025-11-21 23:07:23,196 | INFO     | transexitcode: 0
[2025-11-21 18:07:55] 2025-11-21 23:07:23,196 | INFO     | exeerrorcode: 0
[2025-11-21 18:07:55] 2025-11-21 23:07:23,196 | INFO     | exeerrordiag: 
[2025-11-21 18:07:55] 2025-11-21 23:07:23,196 | INFO     | exitcode: 0
[2025-11-21 18:07:55] 2025-11-21 23:07:23,196 | INFO     | exitmsg: OK
[2025-11-21 18:07:55] 2025-11-21 23:07:23,196 | INFO     | cpuconsumptiontime: 353340 s
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | nevents: 1000
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | neventsw: 0
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | pid: 2614
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | pgrp: 2614
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | corecount: 8
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | event service: False
[2025-11-21 18:07:55] 2025-11-21 23:07:23,197 | INFO     | sizes: {0: 2298625, 1: 2298824, 6: 2299086, 11: 2299114, 45443: 2345141, 45444: 2345140, 45449: 2354374, 45457: 2354564}
[2025-11-21 18:07:55] 2025-11-21 23:07:23,198 | INFO     | --------------------------------------------------
[2025-11-21 18:07:55] 2025-11-21 23:07:23,198 | INFO     | 
[2025-11-21 18:07:55] 2025-11-21 23:07:23,198 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 18:07:55] 2025-11-21 23:07:23,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,228 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:07:55] 2025-11-21 23:07:23,232 | INFO     | job 6892548604 has completed (purged errors)
[2025-11-21 18:07:55] 2025-11-21 23:07:23,232 | INFO     | overall cleanup function is called
[2025-11-21 18:07:55] 2025-11-21 23:07:24,246 | INFO     | --- collectZombieJob: --- 10, [2614]
[2025-11-21 18:07:55] 2025-11-21 23:07:24,246 | INFO     | zombie collector waiting for pid 2614
[2025-11-21 18:07:55] 2025-11-21 23:07:24,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:07:55] 2025-11-21 23:07:24,246 | INFO     | collected zombie processes
[2025-11-21 18:07:55] 2025-11-21 23:07:24,246 | INFO     | will attempt to kill all subprocesses of pid=2614
[2025-11-21 18:07:55] 2025-11-21 23:07:24,342 | INFO     | process IDs to be killed: [2614] (in reverse order)
[2025-11-21 18:07:55] 2025-11-21 23:07:24,496 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:07:55] 2025-11-21 23:07:24,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:07:55] 2025-11-21 23:07:24,502 | INFO     | did not find any defunct processes belonging to 2614
[2025-11-21 18:07:55] 2025-11-21 23:07:24,506 | INFO     | did not find any defunct processes belonging to 2614
[2025-11-21 18:07:55] 2025-11-21 23:07:24,509 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:07:55] 2025-11-21 23:07:24,509 | INFO     | ready for new job
[2025-11-21 18:07:55] 2025-11-21 23:07:24,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:07:55] 2025-11-21 23:07:24,512 | INFO     | ***************************************
[2025-11-21 18:07:55] 2025-11-21 23:07:24,513 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:07:55] 2025-11-21 23:07:24,513 | INFO     | ***************************************
[2025-11-21 18:07:55] 2025-11-21 23:07:24,513 | INFO     | 
[2025-11-21 18:07:55] 2025-11-21 23:07:24,513 | INFO     | architecture information:
[2025-11-21 18:07:55] 2025-11-21 23:07:24,514 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:07:55] 2025-11-21 23:07:24,533 | INFO     | cat /etc/os-release:
[2025-11-21 18:07:55] NAME="CentOS Linux"
[2025-11-21 18:07:55] VERSION="7 (Core)"
[2025-11-21 18:07:55] ID="centos"
[2025-11-21 18:07:55] ID_LIKE="rhel fedora"
[2025-11-21 18:07:55] VERSION_ID="7"
[2025-11-21 18:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:07:55] ANSI_COLOR="0;31"
[2025-11-21 18:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:07:55] HOME_URL="https://www.centos.org/"
[2025-11-21 18:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:07:55] 
[2025-11-21 18:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:07:55] 
[2025-11-21 18:07:55] 2025-11-21 23:07:24,533 | INFO     | ***************************************
[2025-11-21 18:07:55] 2025-11-21 23:07:25,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 18:07:55] 2025-11-21 23:07:25,055 | INFO     | sufficient remaining disk space (17426284544 B)
[2025-11-21 18:07:55] 2025-11-21 23:07:25,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:07:55] 2025-11-21 23:07:25,056 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:07:55] 2025-11-21 23:07:25,057 | INFO     | update_server=False
[2025-11-21 18:07:55] 2025-11-21 23:07:25,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:07:55] 2025-11-21 23:07:25,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:07:55] 2025-11-21 23:07:25,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:07:55] 2025-11-21 23:07:25,205 | INFO     | all data control threads have been joined
[2025-11-21 18:07:55] 2025-11-21 23:07:25,412 | INFO     | all payload control threads have been joined
[2025-11-21 18:07:55] 2025-11-21 23:07:25,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:07:55] 2025-11-21 23:07:25,472 | INFO     | all job control threads have been joined
[2025-11-21 18:07:55] 2025-11-21 23:07:25,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:07:55] 2025-11-21 23:07:25,484 | INFO     | aborting loop
[2025-11-21 18:07:55] 2025-11-21 23:07:26,063 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,064 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,210 | INFO     | [data] control thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,418 | INFO     | [payload] control thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,478 | INFO     | [job] control thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,479 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,486 | INFO     | [job] validate thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,489 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,494 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,543 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,579 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,609 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:26,954 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:27,063 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:27,210 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:29,462 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:07:55] 2025-11-21 23:07:43,926 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:07:55] 2025-11-21 23:07:45,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385334245184)>', '<ExcThread(monitor, started 140384730593024)>']
[2025-11-21 18:07:55] 2025-11-21 23:07:50,317 | INFO     | all workflow threads have been joined
[2025-11-21 18:07:55] 2025-11-21 23:07:50,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:07:55] 2025-11-21 23:07:50,318 | INFO     | traces error code: 0
[2025-11-21 18:07:55] 2025-11-21 23:07:50,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:07:55] 2025-11-21 23:07:54,875 | INFO     | PID=28530 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 18:07:55] 2025-11-21 23:07:54,876 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:07:55] 2025-11-21 23:07:54,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:07:55] 2025-11-21 23:07:54,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:07:55] 2025-11-21 23:07:54,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:07:55] 2025-11-21 23:07:54,877 | INFO     | [monitor] control thread has ended
[2025-11-21 18:07:55] 2025-11-21 23:07:54,978 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:07:55] 2025-11-21 23:07:54,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:07:55] 2025-11-21 23:07:54,987 [wrapper] pilotpid: 28530
[2025-11-21 18:07:55] 2025-11-21 23:07:54,992 [wrapper] Pilot exit status: 0
[2025-11-21 18:07:55] 2025-11-21 23:07:55,010 [wrapper] pandaids: 6892548604
[2025-11-21 18:07:55] 2025-11-21 23:07:55,056 [wrapper] cleanup supervisor_pilot  9451 28531
[2025-11-21 18:07:55] 2025-11-21 23:07:55,061 [wrapper] Test setup, not cleaning
[2025-11-21 18:07:55] 2025-11-21 23:07:55,066 [wrapper] apfmon messages muted
[2025-11-21 18:07:55] 2025-11-21 23:07:55,070 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:07:55] 2025-11-21 23:07:55,075 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:07:55]  *** Error codes and diagnostics ***
[2025-11-21 18:07:55]     "exeErrorCode": 0,
[2025-11-21 18:07:55]     "exeErrorDiag": "",
[2025-11-21 18:07:55]     "pilotErrorCode": 0,
[2025-11-21 18:07:55]     "pilotErrorDiag": "",
[2025-11-21 18:07:55]  *** Listing of results directory ***
[2025-11-21 18:07:55] total 1321508
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-21 18:07:55] -rwx------ 1 boincer umatlas     36292 Nov 19 03:43 runpilot2-wrapper.sh
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:43 queuedata.json
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas       100 Nov 21 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:07:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 05:29 run_atlas
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas       105 Nov 21 05:29 job.xml
[2025-11-21 18:07:55] -rw-r--r-- 2 boincer umatlas 410202313 Nov 21 05:29 EVNT.47493027._000336.pool.root.1
[2025-11-21 18:07:55] -rw-r--r-- 2 boincer umatlas     15120 Nov 21 05:29 start_atlas.sh
[2025-11-21 18:07:55] drwxrwx--x 2 boincer umatlas      4096 Nov 21 05:29 shared
[2025-11-21 18:07:55] -rw-r--r-- 2 boincer umatlas    590098 Nov 21 05:29 input.tar.gz
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas         0 Nov 21 05:29 boinc_lockfile
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas      2773 Nov 21 05:29 pandaJob.out
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas    989817 Nov 21 05:29 agis_schedconf.cvmfs.json
[2025-11-21 18:07:55] drwx------ 5 boincer umatlas      4096 Nov 21 05:29 pilot3
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas       533 Nov 21 17:54 boinc_task_state.xml
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 18:01 init_data.xml
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas 922720589 Nov 21 18:06 HITS.47493029._003319.pool.root.1
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas      1064 Nov 21 18:07 memory_monitor_summary.json
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas   1526164 Nov 21 18:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas   1984713 Nov 21 18:07 log.47493029._003319.job.log.tgz.1
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas      8658 Nov 21 18:07 heartbeat.json
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 18:07 boinc_mmap_file
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas        29 Nov 21 18:07 wrapper_checkpoint.txt
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas        95 Nov 21 18:07 pilot_heartbeat.json
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas       745 Nov 21 18:07 pilotlog.txt
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas   6206709 Nov 21 18:07 log.47493029._003319.job.log.1
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas       353 Nov 21 18:07 output.list
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas       620 Nov 21 18:07 runtime_log
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas   8212480 Nov 21 18:07 result.tar.gz
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas       668 Nov 21 18:07 ZFMMDm8xsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE5GKDmo2QLDn.diag
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas      8704 Nov 21 18:07 runtime_log.err
[2025-11-21 18:07:55] -rw-r--r-- 1 boincer umatlas     21311 Nov 21 18:07 stderr.txt
[2025-11-21 18:07:55] HITS file was successfully produced:
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas 922720589 Nov 21 18:06 shared/HITS.pool.root.1
[2025-11-21 18:07:55]  *** Contents of shared directory: ***
[2025-11-21 18:07:55] total 1310308
[2025-11-21 18:07:55] -rw-r--r-- 2 boincer umatlas 410202313 Nov 21 05:29 ATLAS.root_0
[2025-11-21 18:07:55] -rw-r--r-- 2 boincer umatlas     15120 Nov 21 05:29 start_atlas.sh
[2025-11-21 18:07:55] -rw-r--r-- 2 boincer umatlas    590098 Nov 21 05:29 input.tar.gz
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas 922720589 Nov 21 18:06 HITS.pool.root.1
[2025-11-21 18:07:55] -rw------- 1 boincer umatlas   8212480 Nov 21 18:07 result.tar.gz
18:07:56 (24837): run_atlas exited; CPU time 350421.818893
18:07:56 (24837): called boinc_finish(0)

</stderr_txt>
]]>

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