Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:42:12 (31454): wrapper (7.7.26015): starting
05:42:12 (31454): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 05:42:12] Arguments: --nthreads 8
[2025-11-21 05:42:12] Threads: 8
[2025-11-21 05:42:12] Checking for CVMFS
[2025-11-21 05:42:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:42:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:42:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:42:12] 2.11.2.0 2831 35747 81748 153121 2 81 17192914 20275201 1 130560 0 3391238 99.421 2513555 24299 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 05:42:12] CVMFS is ok
[2025-11-21 05:42:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:42:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 05:42:12] Further information can be found at the LHC@home message board.
[2025-11-21 05:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:42:12] Checking for apptainer binary...
[2025-11-21 05:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 05:42:12] Running /usr/bin/apptainer --version
[2025-11-21 05:42:12] apptainer version 1.3.2-1.el7
[2025-11-21 05:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:42:14] c-204-31.aglt2.org
[2025-11-21 05:42:14] apptainer works
[2025-11-21 05:42:14] Set ATHENA_PROC_NUMBER=8
[2025-11-21 05:42:14] Set ATHENA_CORE_NUMBER=8
[2025-11-21 05:42:14] Starting ATLAS job with PandaID=6893852749
[2025-11-21 05:42:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:29:54]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:29:54] 2025-11-21 23:28:54,595 | INFO     | time since job start (45982s) is within the limit (172800.0s)
[2025-11-21 18:29:54] 2025-11-21 23:28:56,601 | INFO     | time since job start (45984s) is within the limit (172800.0s)
[2025-11-21 18:29:54] 2025-11-21 23:28:56,678 | INFO     | monitor loop #3406: job 0:6893852749 is in state 'finished'
[2025-11-21 18:29:54] 2025-11-21 23:28:56,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,606 | INFO     | time since job start (45986s) is within the limit (172800.0s)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,675 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 18:29:54] 2025-11-21 23:28:58,679 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-21 18:29:54] 2025-11-21 23:28:58,681 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893852749/memory_monitor_output.txt (trf name=prmon)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,698 | INFO     | extracted standard info from memory monitor json
[2025-11-21 18:29:54] 2025-11-21 23:28:58,698 | WARNING  | standard memory fields were not found in memory monitor json (or json doesn't exist yet): 'totRCHAR'
[2025-11-21 18:29:54] 2025-11-21 23:28:58,709 | INFO     | fitting pss+swap vs Time
[2025-11-21 18:29:54] 2025-11-21 23:28:58,710 | INFO     | sum of square deviations: 107732214363.82927
[2025-11-21 18:29:54] 2025-11-21 23:28:58,721 | INFO     | sum of deviations: 1101059792441.1667
[2025-11-21 18:29:54] 2025-11-21 23:28:58,722 | INFO     | mean x: 1763743196.5746799
[2025-11-21 18:29:54] 2025-11-21 23:28:58,722 | INFO     | mean y: 2909432.7396870553
[2025-11-21 18:29:54] 2025-11-21 23:28:58,722 | INFO     | intersect: -18023144606.970577
[2025-11-21 18:29:54] 2025-11-21 23:28:58,723 | INFO     | chi2: 2.449879365184664
[2025-11-21 18:29:54] 2025-11-21 23:28:58,724 | INFO     | sum of square deviations: 105449874382.97565
[2025-11-21 18:29:54] 2025-11-21 23:28:58,735 | INFO     | sum of deviations: 1086227858323.9198
[2025-11-21 18:29:54] 2025-11-21 23:28:58,735 | INFO     | mean x: 1763743044.0759313
[2025-11-21 18:29:54] 2025-11-21 23:28:58,735 | INFO     | mean y: 2908441.6618911177
[2025-11-21 18:29:54] 2025-11-21 23:28:58,736 | INFO     | intersect: -18165219691.35379
[2025-11-21 18:29:54] 2025-11-21 23:28:58,736 | INFO     | chi2: 2.4477402765769263
[2025-11-21 18:29:54] 2025-11-21 23:28:58,737 | INFO     | current chi2=2.4477402765769263 (change=0.08731403832108554 %)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,737 | INFO     | right removable region: 697
[2025-11-21 18:29:54] 2025-11-21 23:28:58,738 | INFO     | sum of square deviations: 105449713464.66628
[2025-11-21 18:29:54] 2025-11-21 23:28:58,748 | INFO     | sum of deviations: 905513811318.1749
[2025-11-21 18:29:54] 2025-11-21 23:28:58,749 | INFO     | mean x: 1763743349.0787966
[2025-11-21 18:29:54] 2025-11-21 23:28:58,749 | INFO     | mean y: 2922474.1604584525
[2025-11-21 18:29:54] 2025-11-21 23:28:58,749 | INFO     | intersect: -15142628042.167612
[2025-11-21 18:29:54] 2025-11-21 23:28:58,750 | INFO     | chi2: 0.1298887674972055
[2025-11-21 18:29:54] 2025-11-21 23:28:58,750 | INFO     | current chi2=0.1298887674972055 (change=94.6981565972978 %)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,751 | INFO     | sum of square deviations: 103199720624.64244
[2025-11-21 18:29:54] 2025-11-21 23:28:58,761 | INFO     | sum of deviations: 861123925569.4443
[2025-11-21 18:29:54] 2025-11-21 23:28:58,761 | INFO     | mean x: 1763743501.5815296
[2025-11-21 18:29:54] 2025-11-21 23:28:58,761 | INFO     | mean y: 2925481.4877344877
[2025-11-21 18:29:54] 2025-11-21 23:28:58,761 | INFO     | intersect: -14714185365.194332
[2025-11-21 18:29:54] 2025-11-21 23:28:58,762 | INFO     | chi2: 0.09117741624805713
[2025-11-21 18:29:54] 2025-11-21 23:28:58,762 | INFO     | current chi2=0.09117741624805713 (change=29.803463374907473 %)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,763 | INFO     | sum of square deviations: 100982003586.27753
[2025-11-21 18:29:54] 2025-11-21 23:28:58,773 | INFO     | sum of deviations: 832824885013.9387
[2025-11-21 18:29:54] 2025-11-21 23:28:58,773 | INFO     | mean x: 1763743654.0828488
[2025-11-21 18:29:54] 2025-11-21 23:28:58,774 | INFO     | mean y: 2927426.3168604653
[2025-11-21 18:29:54] 2025-11-21 23:28:58,774 | INFO     | intersect: -14543125867.729885
[2025-11-21 18:29:54] 2025-11-21 23:28:58,775 | INFO     | chi2: 0.08454805816408843
[2025-11-21 18:29:54] 2025-11-21 23:28:58,775 | INFO     | current chi2=0.08454805816408843 (change=7.270833455000386 %)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,775 | INFO     | left removable region: 30
[2025-11-21 18:29:54] 2025-11-21 23:28:58,776 | INFO     | sum of square deviations: 92014603726.13202
[2025-11-21 18:29:54] 2025-11-21 23:28:58,785 | INFO     | sum of deviations: 763983484611.6459
[2025-11-21 18:29:54] 2025-11-21 23:28:58,785 | INFO     | mean x: 1763743928.5832083
[2025-11-21 18:29:54] 2025-11-21 23:28:58,785 | INFO     | mean y: 2930237.736131934
[2025-11-21 18:29:54] 2025-11-21 23:28:58,786 | INFO     | intersect: -14641171654.309004
[2025-11-21 18:29:54] 2025-11-21 23:28:58,786 | INFO     | chi2: 0.07854119031468941
[2025-11-21 18:29:54] 2025-11-21 23:28:58,787 | INFO     | current memory leak: 8.30 B/s (using 667 data points, chi2=0.08)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,787 | INFO     | could have reported an average CPU frequency of 2153 MHz (29 samples)
[2025-11-21 18:29:54] 2025-11-21 23:28:58,787 | INFO     | ..............................
[2025-11-21 18:29:54] 2025-11-21 23:28:58,787 | INFO     | . Timing measurements:
[2025-11-21 18:29:54] 2025-11-21 23:28:58,787 | INFO     | . get job = 0 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | . initial setup = 2 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | . payload setup = 9 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | . stage-in = 0 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | . payload execution = 45881 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | . stage-out = 3 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | . log creation = 0 s
[2025-11-21 18:29:54] 2025-11-21 23:28:58,788 | INFO     | ..............................
[2025-11-21 18:29:54] 2025-11-21 23:28:59,105 | INFO     | 
[2025-11-21 18:29:54] 2025-11-21 23:28:59,105 | INFO     | job summary report
[2025-11-21 18:29:54] 2025-11-21 23:28:59,105 | INFO     | --------------------------------------------------
[2025-11-21 18:29:54] 2025-11-21 23:28:59,106 | INFO     | PanDA job id: 6893852749
[2025-11-21 18:29:54] 2025-11-21 23:28:59,106 | INFO     | task id: 47523449
[2025-11-21 18:29:54] 2025-11-21 23:28:59,106 | INFO     | errors: (none)
[2025-11-21 18:29:54] 2025-11-21 23:28:59,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:29:54] 2025-11-21 23:28:59,106 | INFO     | pilot state: finished 
[2025-11-21 18:29:54] 2025-11-21 23:28:59,107 | INFO     | transexitcode: 0
[2025-11-21 18:29:54] 2025-11-21 23:28:59,107 | INFO     | exeerrorcode: 0
[2025-11-21 18:29:54] 2025-11-21 23:28:59,107 | INFO     | exeerrordiag: 
[2025-11-21 18:29:54] 2025-11-21 23:28:59,107 | INFO     | exitcode: 0
[2025-11-21 18:29:54] 2025-11-21 23:28:59,107 | INFO     | exitmsg: OK
[2025-11-21 18:29:54] 2025-11-21 23:28:59,107 | INFO     | cpuconsumptiontime: 355777 s
[2025-11-21 18:29:54] 2025-11-21 23:28:59,108 | INFO     | nevents: 1000
[2025-11-21 18:29:54] 2025-11-21 23:28:59,108 | INFO     | neventsw: 0
[2025-11-21 18:29:54] 2025-11-21 23:28:59,108 | INFO     | pid: 9353
[2025-11-21 18:29:54] 2025-11-21 23:28:59,108 | INFO     | pgrp: 9353
[2025-11-21 18:29:54] 2025-11-21 23:28:59,108 | INFO     | corecount: 8
[2025-11-21 18:29:54] 2025-11-21 23:28:59,108 | INFO     | event service: False
[2025-11-21 18:29:54] 2025-11-21 23:28:59,109 | INFO     | sizes: {0: 2298801, 1: 2298801, 6: 2299091, 11: 2299119, 45954: 2345401, 45959: 2354395, 45960: 2354579, 45969: 2354825}
[2025-11-21 18:29:54] 2025-11-21 23:28:59,109 | INFO     | --------------------------------------------------
[2025-11-21 18:29:54] 2025-11-21 23:28:59,109 | INFO     | 
[2025-11-21 18:29:54] 2025-11-21 23:28:59,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 18:29:54] 2025-11-21 23:28:59,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:29:54] 2025-11-21 23:28:59,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:29:54] 2025-11-21 23:28:59,145 | INFO     | job 6893852749 has completed (purged errors)
[2025-11-21 18:29:54] 2025-11-21 23:28:59,146 | INFO     | overall cleanup function is called
[2025-11-21 18:29:54] 2025-11-21 23:29:00,161 | INFO     | --- collectZombieJob: --- 10, [9353]
[2025-11-21 18:29:54] 2025-11-21 23:29:00,162 | INFO     | zombie collector waiting for pid 9353
[2025-11-21 18:29:54] 2025-11-21 23:29:00,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:29:54] 2025-11-21 23:29:00,162 | INFO     | collected zombie processes
[2025-11-21 18:29:54] 2025-11-21 23:29:00,162 | INFO     | will attempt to kill all subprocesses of pid=9353
[2025-11-21 18:29:54] 2025-11-21 23:29:00,257 | INFO     | process IDs to be killed: [9353] (in reverse order)
[2025-11-21 18:29:54] 2025-11-21 23:29:00,324 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:29:54] 2025-11-21 23:29:00,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:29:54] 2025-11-21 23:29:00,329 | INFO     | did not find any defunct processes belonging to 9353
[2025-11-21 18:29:54] 2025-11-21 23:29:00,332 | INFO     | did not find any defunct processes belonging to 9353
[2025-11-21 18:29:54] 2025-11-21 23:29:00,335 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:29:54] 2025-11-21 23:29:00,335 | INFO     | ready for new job
[2025-11-21 18:29:54] 2025-11-21 23:29:00,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:29:54] 2025-11-21 23:29:00,339 | INFO     | ***************************************
[2025-11-21 18:29:54] 2025-11-21 23:29:00,339 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:29:54] 2025-11-21 23:29:00,339 | INFO     | ***************************************
[2025-11-21 18:29:54] 2025-11-21 23:29:00,339 | INFO     | 
[2025-11-21 18:29:54] 2025-11-21 23:29:00,340 | INFO     | architecture information:
[2025-11-21 18:29:54] 2025-11-21 23:29:00,341 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:29:54] 2025-11-21 23:29:00,361 | INFO     | cat /etc/os-release:
[2025-11-21 18:29:54] NAME="CentOS Linux"
[2025-11-21 18:29:54] VERSION="7 (Core)"
[2025-11-21 18:29:54] ID="centos"
[2025-11-21 18:29:54] ID_LIKE="rhel fedora"
[2025-11-21 18:29:54] VERSION_ID="7"
[2025-11-21 18:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:29:54] ANSI_COLOR="0;31"
[2025-11-21 18:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:29:54] HOME_URL="https://www.centos.org/"
[2025-11-21 18:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:29:54] 
[2025-11-21 18:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:29:54] 
[2025-11-21 18:29:54] 2025-11-21 23:29:00,361 | INFO     | ***************************************
[2025-11-21 18:29:54] 2025-11-21 23:29:00,864 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 18:29:54] 2025-11-21 23:29:00,887 | INFO     | sufficient remaining disk space (17430478848 B)
[2025-11-21 18:29:54] 2025-11-21 23:29:00,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:29:54] 2025-11-21 23:29:00,888 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:29:54] 2025-11-21 23:29:00,888 | INFO     | update_server=False
[2025-11-21 18:29:54] 2025-11-21 23:29:00,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:29:54] 2025-11-21 23:29:00,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:29:54] 2025-11-21 23:29:00,889 | INFO     | aborting loop
[2025-11-21 18:29:54] 2025-11-21 23:29:00,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:29:54] 2025-11-21 23:29:01,569 | INFO     | all job control threads have been joined
[2025-11-21 18:29:54] 2025-11-21 23:29:01,654 | INFO     | all data control threads have been joined
[2025-11-21 18:29:54] 2025-11-21 23:29:01,740 | INFO     | all payload control threads have been joined
[2025-11-21 18:29:54] 2025-11-21 23:29:01,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:29:54] 2025-11-21 23:29:01,893 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:01,894 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,281 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,321 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,574 | INFO     | [job] control thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,657 | INFO     | [data] control thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,742 | INFO     | [job] validate thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,743 | INFO     | [payload] control thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,774 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:02,802 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:03,087 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:03,091 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:03,745 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:03,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:29:54] 2025-11-21 23:29:04,893 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:04,893 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:29:54] 2025-11-21 23:29:31,735 | INFO     | PID=2789 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 18:29:54] 2025-11-21 23:29:31,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:29:54] 2025-11-21 23:29:31,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:29:54] 2025-11-21 23:29:31,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:29:54] 2025-11-21 23:29:48,382 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:29:54] 2025-11-21 23:29:48,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685799900992)>', '<ExcThread(monitor, started 139685171009280)>']
[2025-11-21 18:29:54] 2025-11-21 23:29:48,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:29:54] 2025-11-21 23:29:48,823 | INFO     | [monitor] control thread has ended
[2025-11-21 18:29:54] 2025-11-21 23:29:53,591 | INFO     | all workflow threads have been joined
[2025-11-21 18:29:54] 2025-11-21 23:29:53,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:29:54] 2025-11-21 23:29:53,592 | INFO     | traces error code: 0
[2025-11-21 18:29:54] 2025-11-21 23:29:53,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:29:54] 2025-11-21 23:29:53,804 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:29:54] 2025-11-21 23:29:53,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:29:54] 2025-11-21 23:29:53,815 [wrapper] pilotpid: 2789
[2025-11-21 18:29:54] 2025-11-21 23:29:53,819 [wrapper] Pilot exit status: 0
[2025-11-21 18:29:54] 2025-11-21 23:29:53,837 [wrapper] pandaids: 6893852749
[2025-11-21 18:29:54] 2025-11-21 23:29:53,899 [wrapper] cleanup supervisor_pilot 14181 2790
[2025-11-21 18:29:54] 2025-11-21 23:29:53,905 [wrapper] Test setup, not cleaning
[2025-11-21 18:29:54] 2025-11-21 23:29:53,910 [wrapper] apfmon messages muted
[2025-11-21 18:29:54] 2025-11-21 23:29:53,915 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:29:54] 2025-11-21 23:29:53,920 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:29:54]  *** Error codes and diagnostics ***
[2025-11-21 18:29:54]     "exeErrorCode": 0,
[2025-11-21 18:29:54]     "exeErrorDiag": "",
[2025-11-21 18:29:54]     "pilotErrorCode": 0,
[2025-11-21 18:29:54]     "pilotErrorDiag": "",
[2025-11-21 18:29:54]  *** Listing of results directory ***
[2025-11-21 18:29:54] total 1322860
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-21 18:29:54] -rwx------ 1 boincer umatlas     36292 Nov 20 07:08 runpilot2-wrapper.sh
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 07:08 queuedata.json
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas       100 Nov 21 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:29:54] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 05:42 run_atlas
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas       105 Nov 21 05:42 job.xml
[2025-11-21 18:29:54] -rw-r--r-- 2 boincer umatlas 409609204 Nov 21 05:42 EVNT.47493127._000401.pool.root.1
[2025-11-21 18:29:54] -rw-r--r-- 2 boincer umatlas    590099 Nov 21 05:42 input.tar.gz
[2025-11-21 18:29:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 05:42 start_atlas.sh
[2025-11-21 18:29:54] drwxrwx--x 2 boincer umatlas      4096 Nov 21 05:42 shared
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas         0 Nov 21 05:42 boinc_lockfile
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas      2783 Nov 21 05:42 pandaJob.out
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas        57 Nov 21 05:42 setup.sh.local
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas    989817 Nov 21 05:42 agis_schedconf.cvmfs.json
[2025-11-21 18:29:54] drwx------ 5 boincer umatlas      4096 Nov 21 05:42 pilot3
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas       533 Nov 21 18:16 boinc_task_state.xml
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 18:22 init_data.xml
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas 924423413 Nov 21 18:27 HITS.47523449._004001.pool.root.1
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas   1526164 Nov 21 18:28 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas   1995428 Nov 21 18:28 log.47523449._004001.job.log.tgz.1
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas        95 Nov 21 18:28 pilot_heartbeat.json
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas      8397 Nov 21 18:28 heartbeat.json
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 18:29 boinc_mmap_file
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas        29 Nov 21 18:29 wrapper_checkpoint.txt
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas      4745 Nov 21 18:29 pilotlog.txt
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas   6330558 Nov 21 18:29 log.47523449._004001.job.log.1
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas       353 Nov 21 18:29 output.list
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas       620 Nov 21 18:29 runtime_log
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas   8345600 Nov 21 18:29 result.tar.gz
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 18:29 runtime_log.err
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas       668 Nov 21 18:29 lZMLDmedIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmziHKDmUiH8xm.diag
[2025-11-21 18:29:54] -rw-r--r-- 1 boincer umatlas     21401 Nov 21 18:29 stderr.txt
[2025-11-21 18:29:54] HITS file was successfully produced:
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas 924423413 Nov 21 18:27 shared/HITS.pool.root.1
[2025-11-21 18:29:54]  *** Contents of shared directory: ***
[2025-11-21 18:29:54] total 1311524
[2025-11-21 18:29:54] -rw-r--r-- 2 boincer umatlas 409609204 Nov 21 05:42 ATLAS.root_0
[2025-11-21 18:29:54] -rw-r--r-- 2 boincer umatlas    590099 Nov 21 05:42 input.tar.gz
[2025-11-21 18:29:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 05:42 start_atlas.sh
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas 924423413 Nov 21 18:27 HITS.pool.root.1
[2025-11-21 18:29:54] -rw------- 1 boincer umatlas   8345600 Nov 21 18:29 result.tar.gz
18:29:55 (31454): run_atlas exited; CPU time 352000.998661
18:29:55 (31454): called boinc_finish(0)

</stderr_txt>
]]>

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