Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:22:18 (2509764): wrapper (7.7.26015): starting
05:22:18 (2509764): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 05:22:18] Arguments: --nthreads 8
[2025-11-21 05:22:18] Threads: 8
[2025-11-21 05:22:18] Checking for CVMFS
[2025-11-21 05:22:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:22:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:22:19] 2.13.2.0 7884 29323 249828 153121 0 125 32863014 40960001 17165 16776704 0 326406068 99.744 206065449 43587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 05:22:19] CVMFS is ok
[2025-11-21 05:22:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:22:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 05:22:19] Further information can be found at the LHC@home message board.
[2025-11-21 05:22:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:22:19] Checking for apptainer binary...
[2025-11-21 05:22:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 05:22:19] Running /usr/bin/apptainer --version
[2025-11-21 05:22:19] apptainer version 1.4.4-1.el9
[2025-11-21 05:22:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:22:19] c-208-38.aglt2.org
[2025-11-21 05:22:19] apptainer works
[2025-11-21 05:22:19] Set ATHENA_PROC_NUMBER=8
[2025-11-21 05:22:19] Set ATHENA_CORE_NUMBER=8
[2025-11-21 05:22:20] Starting ATLAS job with PandaID=6893839930
[2025-11-21 05:22:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:37:54]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:37:54] 2025-11-21 15:37:20,968 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 10:37:54] 2025-11-21 15:37:20,979 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.130234374999
[2025-11-21 10:37:54] 2025-11-21 15:37:20,998 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6893839930/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:37:54] 2025-11-21 15:37:20,998 | INFO     | extracted standard info from prmon json
[2025-11-21 10:37:54] 2025-11-21 15:37:20,998 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:37:54] 2025-11-21 15:37:20,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:37:54] 2025-11-21 15:37:21,001 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:37:54] 2025-11-21 15:37:21,001 | INFO     | sum of square deviations: 9059721973.454573
[2025-11-21 10:37:54] 2025-11-21 15:37:21,003 | INFO     | sum of deviations: 106907719309.27267
[2025-11-21 10:37:54] 2025-11-21 15:37:21,003 | INFO     | mean x: 1763730017.090909
[2025-11-21 10:37:54] 2025-11-21 15:37:21,003 | INFO     | mean y: 2876617.9545454546
[2025-11-21 10:37:54] 2025-11-21 15:37:21,003 | INFO     | intersect: -20809721622.584507
[2025-11-21 10:37:54] 2025-11-21 15:37:21,003 | INFO     | chi2: 5.34912362319036
[2025-11-21 10:37:54] 2025-11-21 15:37:21,003 | INFO     | sum of square deviations: 8625667016.67985
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | sum of deviations: 206031062426.51825
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | mean x: 1763729864.60066
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | mean y: 2911409.4092409243
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | intersect: -42125208901.09689
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | chi2: 2.3195407048053345
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | current chi2=2.3195407048053345 (change=56.63699573609969 %)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,005 | INFO     | sum of square deviations: 8205687108.563746
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | sum of deviations: 212915464196.75848
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | mean x: 1763729712.1073825
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | mean y: 2913855.8825503355
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | intersect: -45761118503.94835
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | chi2: 2.18614694473517
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | current chi2=2.18614694473517 (change=5.750869549036839 %)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | right removable region: 297
[2025-11-21 10:37:54] 2025-11-21 15:37:21,007 | INFO     | sum of square deviations: 8625555996.67986
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | sum of deviations: 31901578846.171593
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | mean x: 1763730169.60066
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | mean y: 2902818.141914191
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | intersect: -6520245033.491629
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | chi2: 3.262218195387387
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | current chi2=3.262218195387387 (change=39.013968919235545 %)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,009 | INFO     | sum of square deviations: 8205575723.369133
[2025-11-21 10:37:54] 2025-11-21 15:37:21,010 | INFO     | sum of deviations: 18710043886.04022
[2025-11-21 10:37:54] 2025-11-21 15:37:21,010 | INFO     | mean x: 1763730322.0939598
[2025-11-21 10:37:54] 2025-11-21 15:37:21,012 | INFO     | mean y: 2907600.855704698
[2025-11-21 10:37:54] 2025-11-21 15:37:21,012 | INFO     | intersect: -4018683673.420972
[2025-11-21 10:37:54] 2025-11-21 15:37:21,012 | INFO     | chi2: 3.237317311443515
[2025-11-21 10:37:54] 2025-11-21 15:37:21,012 | INFO     | current chi2=3.237317311443515 (change=0.7633114173380745 %)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,012 | INFO     | left removable region: 20
[2025-11-21 10:37:54] 2025-11-21 15:37:21,013 | INFO     | sum of square deviations: 6590305630.714821
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | sum of deviations: 105123694719.18053
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | mean x: 1763730291.5956678
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | mean y: 2954217.483754513
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | intersect: -28130770548.8688
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | chi2: 0.008837036974292988
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | current memory leak: 15.95 B/s (using 277 data points, chi2=0.01)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | could have reported an average CPU frequency of 3800 MHz (14 samples)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,015 | INFO     | ..............................
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . Timing measurements:
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . get job = 0 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . initial setup = 3 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . payload setup = 20 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . stage-in = 0 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . payload execution = 18785 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . stage-out = 2 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,016 | INFO     | . log creation = 0 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,019 | INFO     | ..............................
[2025-11-21 10:37:54] 2025-11-21 15:37:21,114 | INFO     | 
[2025-11-21 10:37:54] 2025-11-21 15:37:21,115 | INFO     | job summary report
[2025-11-21 10:37:54] 2025-11-21 15:37:21,115 | INFO     | --------------------------------------------------
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | PanDA job id: 6893839930
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | task id: 47523449
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | errors: (none)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | pilot state: finished 
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | transexitcode: 0
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | exeerrorcode: 0
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | exeerrordiag: 
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | exitcode: 0
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | exitmsg: OK
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | cpuconsumptiontime: 136444 s
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | nevents: 1000
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | neventsw: 0
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | pid: 2535685
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | pgrp: 2535685
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | corecount: 8
[2025-11-21 10:37:54] 2025-11-21 15:37:21,116 | INFO     | event service: False
[2025-11-21 10:37:54] 2025-11-21 15:37:21,117 | INFO     | sizes: {0: 2298802, 1: 2298802, 11: 2298830, 16: 2299120, 22: 2299148, 18809: 2333478, 18810: 2333605, 18812: 2342657, 18813: 2342713, 18825: 2342959}
[2025-11-21 10:37:54] 2025-11-21 15:37:21,117 | INFO     | --------------------------------------------------
[2025-11-21 10:37:54] 2025-11-21 15:37:21,117 | INFO     | 
[2025-11-21 10:37:54] 2025-11-21 15:37:21,117 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-21 10:37:54] 2025-11-21 15:37:21,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:37:54] 2025-11-21 15:37:21,158 | INFO     | job 6893839930 has completed (purged errors)
[2025-11-21 10:37:54] 2025-11-21 15:37:21,158 | INFO     | overall cleanup function is called
[2025-11-21 10:37:54] 2025-11-21 15:37:21,412 | INFO     | PID=2517058 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 10:37:54] 2025-11-21 15:37:21,413 | INFO     | .. there are 28 such processes running
[2025-11-21 10:37:54] 2025-11-21 15:37:22,185 | INFO     | --- collectZombieJob: --- 10, [2535685]
[2025-11-21 10:37:54] 2025-11-21 15:37:22,185 | INFO     | zombie collector waiting for pid 2535685
[2025-11-21 10:37:54] 2025-11-21 15:37:22,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:37:54] 2025-11-21 15:37:22,185 | INFO     | collected zombie processes
[2025-11-21 10:37:54] 2025-11-21 15:37:22,186 | INFO     | will attempt to kill all subprocesses of pid=2535685
[2025-11-21 10:37:54] 2025-11-21 15:37:22,618 | INFO     | process IDs to be killed: [2535685] (in reverse order)
[2025-11-21 10:37:54] 2025-11-21 15:37:22,815 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:37:54] 2025-11-21 15:37:22,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:37:54] 2025-11-21 15:37:22,843 | INFO     | did not find any defunct processes belonging to 2535685
[2025-11-21 10:37:54] 2025-11-21 15:37:22,864 | INFO     | did not find any defunct processes belonging to 2535685
[2025-11-21 10:37:54] 2025-11-21 15:37:22,866 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:37:54] 2025-11-21 15:37:22,866 | INFO     | ready for new job
[2025-11-21 10:37:54] 2025-11-21 15:37:22,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:37:54] 2025-11-21 15:37:22,868 | INFO     | ***************************************
[2025-11-21 10:37:54] 2025-11-21 15:37:22,868 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:37:54] 2025-11-21 15:37:22,868 | INFO     | ***************************************
[2025-11-21 10:37:54] 2025-11-21 15:37:22,868 | INFO     | 
[2025-11-21 10:37:54] 2025-11-21 15:37:22,874 | INFO     | architecture information:
[2025-11-21 10:37:54] 2025-11-21 15:37:22,874 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:37:54] 2025-11-21 15:37:22,897 | INFO     | cat /etc/os-release:
[2025-11-21 10:37:54] NAME="CentOS Linux"
[2025-11-21 10:37:54] VERSION="7 (Core)"
[2025-11-21 10:37:54] ID="centos"
[2025-11-21 10:37:54] ID_LIKE="rhel fedora"
[2025-11-21 10:37:54] VERSION_ID="7"
[2025-11-21 10:37:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:37:54] ANSI_COLOR="0;31"
[2025-11-21 10:37:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:37:54] HOME_URL="https://www.centos.org/"
[2025-11-21 10:37:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:37:54] 
[2025-11-21 10:37:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:37:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:37:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:37:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:37:54] 
[2025-11-21 10:37:54] 2025-11-21 15:37:22,897 | INFO     | ***************************************
[2025-11-21 10:37:54] 2025-11-21 15:37:23,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-21 10:37:54] 2025-11-21 15:37:23,433 | INFO     | sufficient remaining disk space (152598216704 B)
[2025-11-21 10:37:54] 2025-11-21 15:37:23,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:37:54] 2025-11-21 15:37:23,434 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:37:54] 2025-11-21 15:37:23,434 | INFO     | update_server=False
[2025-11-21 10:37:54] 2025-11-21 15:37:23,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:37:54] 2025-11-21 15:37:23,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:37:54] 2025-11-21 15:37:23,434 | INFO     | aborting loop
[2025-11-21 10:37:54] 2025-11-21 15:37:23,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:37:54] 2025-11-21 15:37:23,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:37:54] 2025-11-21 15:37:24,303 | INFO     | all job control threads have been joined
[2025-11-21 10:37:54] 2025-11-21 15:37:24,439 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,440 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,461 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,481 | INFO     | all data control threads have been joined
[2025-11-21 10:37:54] 2025-11-21 15:37:24,805 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,884 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,932 | INFO     | all payload control threads have been joined
[2025-11-21 10:37:54] 2025-11-21 15:37:24,940 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,984 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:24,997 | INFO     | [job] validate thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:25,309 | INFO     | [job] control thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:25,486 | INFO     | [data] control thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:25,712 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:25,753 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:25,937 | INFO     | [payload] control thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:26,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:37:54] 2025-11-21 15:37:27,134 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:27,588 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:37:54] 2025-11-21 15:37:28,158 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:37:54] 2025-11-21 15:37:28,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958214854464)>', '<ExcThread(monitor, started 139957414917888)>']
[2025-11-21 10:37:54] 2025-11-21 15:37:33,443 | INFO     | all workflow threads have been joined
[2025-11-21 10:37:54] 2025-11-21 15:37:33,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:37:54] 2025-11-21 15:37:33,444 | INFO     | traces error code: 0
[2025-11-21 10:37:54] 2025-11-21 15:37:33,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:37:54] 2025-11-21 15:37:53,309 [wrapper] supervise_pilot (15 min periods counter: 22)
[2025-11-21 10:37:54] 2025-11-21 15:37:53,938 | INFO     | PID=2517058 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 10:37:54] 2025-11-21 15:37:53,939 | INFO     | .. there are 28 such processes running
[2025-11-21 10:37:54] 2025-11-21 15:37:53,939 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:37:54] 2025-11-21 15:37:53,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:37:54] 2025-11-21 15:37:53,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:37:54] 2025-11-21 15:37:53,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:37:54] 2025-11-21 15:37:53,939 | INFO     | [monitor] control thread has ended
[2025-11-21 10:37:54] 2025-11-21 15:37:54,097 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:37:54] 2025-11-21 15:37:54,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:37:54] 2025-11-21 15:37:54,112 [wrapper] pilotpid: 2517058
[2025-11-21 10:37:54] 2025-11-21 15:37:54,116 [wrapper] Pilot exit status: 0
[2025-11-21 10:37:54] 2025-11-21 15:37:54,145 [wrapper] pandaids: 6893839930
[2025-11-21 10:37:54] 2025-11-21 15:37:54,271 [wrapper] cleanup supervisor_pilot 3733828 2517059
[2025-11-21 10:37:54] 2025-11-21 15:37:54,297 [wrapper] Test setup, not cleaning
[2025-11-21 10:37:54] 2025-11-21 15:37:54,306 [wrapper] apfmon messages muted
[2025-11-21 10:37:54] 2025-11-21 15:37:54,327 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:37:54] 2025-11-21 15:37:54,333 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:37:54]  *** Error codes and diagnostics ***
[2025-11-21 10:37:54]     "exeErrorCode": 0,
[2025-11-21 10:37:54]     "exeErrorDiag": "",
[2025-11-21 10:37:54]     "pilotErrorCode": 0,
[2025-11-21 10:37:54]     "pilotErrorDiag": "",
[2025-11-21 10:37:54]  *** Listing of results directory ***
[2025-11-21 10:37:54] total 1313200
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:17 queuedata.json
[2025-11-21 10:37:54] -rwx------. 1 boincer umatlas     36292 Nov 20 05:18 runpilot2-wrapper.sh
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas       100 Nov 21 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:37:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 05:22 run_atlas
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas       105 Nov 21 05:22 job.xml
[2025-11-21 10:37:54] -rw-r--r--. 2 boincer umatlas 411371797 Nov 21 05:22 EVNT.47493127._000155.pool.root.1
[2025-11-21 10:37:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 05:22 start_atlas.sh
[2025-11-21 10:37:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 05:22 shared
[2025-11-21 10:37:54] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 05:22 input.tar.gz
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas         0 Nov 21 05:22 boinc_lockfile
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas      2783 Nov 21 05:22 pandaJob.out
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas        57 Nov 21 05:22 setup.sh.local
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas    989817 Nov 21 05:22 agis_schedconf.cvmfs.json
[2025-11-21 10:37:54] drwx------. 5 boincer umatlas      4096 Nov 21 05:22 pilot3
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas      7178 Nov 21 10:28 init_data.xml
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas       532 Nov 21 10:29 boinc_task_state.xml
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas 920960191 Nov 21 10:36 HITS.47523449._001541.pool.root.1
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas      1042 Nov 21 10:37 memory_monitor_summary.json
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas   1526164 Nov 21 10:37 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas   1609963 Nov 21 10:37 log.47523449._001541.job.log.tgz.1
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas        95 Nov 21 10:37 pilot_heartbeat.json
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas      8590 Nov 21 10:37 heartbeat.json
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 10:37 boinc_mmap_file
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas        29 Nov 21 10:37 wrapper_checkpoint.txt
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas       823 Nov 21 10:37 pilotlog.txt
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas   2619296 Nov 21 10:37 log.47523449._001541.job.log.1
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas       353 Nov 21 10:37 output.list
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas       620 Nov 21 10:37 runtime_log
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas   4249600 Nov 21 10:37 result.tar.gz
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas      9361 Nov 21 10:37 runtime_log.err
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas       660 Nov 21 10:37 2tVKDm3uGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5IHKDme64Ytm.diag
[2025-11-21 10:37:54] -rw-r--r--. 1 boincer umatlas     21410 Nov 21 10:37 stderr.txt
[2025-11-21 10:37:54] HITS file was successfully produced:
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas 920960191 Nov 21 10:36 shared/HITS.pool.root.1
[2025-11-21 10:37:54]  *** Contents of shared directory: ***
[2025-11-21 10:37:54] total 1305864
[2025-11-21 10:37:54] -rw-r--r--. 2 boincer umatlas 411371797 Nov 21 05:22 ATLAS.root_0
[2025-11-21 10:37:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 05:22 start_atlas.sh
[2025-11-21 10:37:54] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 05:22 input.tar.gz
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas 920960191 Nov 21 10:36 HITS.pool.root.1
[2025-11-21 10:37:54] -rw-------. 1 boincer umatlas   4249600 Nov 21 10:37 result.tar.gz
10:37:55 (2509764): run_atlas exited; CPU time 136695.312767
10:37:55 (2509764): called boinc_finish(0)

</stderr_txt>
]]>

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