Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:52 (2718783): wrapper (7.7.26015): starting
01:53:52 (2718783): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 01:53:52] Arguments: --nthreads 8
[2025-11-21 01:53:52] Threads: 8
[2025-11-21 01:53:52] Checking for CVMFS
[2025-11-21 01:53:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 01:53:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 01:53:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 01:53:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 01:53:53] 2.11.3.0 2934339 21015 214824 153117 2 489 24717463 45568001 13059 130560 0 137780227 99.801 84707046 27281 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-21 01:53:53] CVMFS is ok
[2025-11-21 01:53:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 01:53:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 01:53:53] Further information can be found at the LHC@home message board.
[2025-11-21 01:53:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 01:53:53] Checking for apptainer binary...
[2025-11-21 01:53:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 01:53:53] Running /usr/bin/apptainer --version
[2025-11-21 01:53:53] apptainer version 1.4.1-1.el9
[2025-11-21 01:53:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 01:53:53] wns0004.triumf.lcg
[2025-11-21 01:53:53] apptainer works
[2025-11-21 01:53:53] Set ATHENA_PROC_NUMBER=8
[2025-11-21 01:53:53] Set ATHENA_CORE_NUMBER=8
[2025-11-21 01:53:53] Starting ATLAS job with PandaID=6894257886
[2025-11-21 01:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 01:59:34]  *** The last 200 lines of the pilot log: ***
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | wrong length of table data, x=[1763718905.0, 1763718966.0], y=[1687.0, 492541.0] (must be same and length>=4)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | ..............................
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . Timing measurements:
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . get job = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . initial setup = 4 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . payload setup = 13 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . stage-in = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . payload execution = 107 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . stage-out = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . log creation = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | ..............................
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 01:59:34] 2025-11-21 09:59:02,357 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894257886/pilotlog.txt
[2025-11-21 01:59:34] 2025-11-21 09:59:02,392 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 01:59:34] - Log from pilotlog.txt -
[2025-11-21 01:59:34] 2025-11-21 09:59:02,340 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894257886/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,341 | INFO     | extracted standard info from prmon json
[2025-11-21 01:59:34] 2025-11-21 09:59:02,341 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 01:59:34] 2025-11-21 09:59:02,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | wrong length of table data, x=[1763718905.0, 1763718966.0], y=[1687.0, 492541.0] (must be same and length>=4)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | ..............................
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . Timing measurements:
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . get job = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . initial setup = 4 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . payload setup = 13 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . stage-in = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . payload execution = 107 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . stage-out = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . log creation = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | ..............................
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 01:59:34] 2025-11-21 09:59:02,357 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894257886/pilotlog.txt
[2025-11-21 01:59:34] 2025-11-21 09:59:02,392 | WARNING  | 
[2025-11-21 01:59:34] [begin log extracts]
[2025-11-21 01:59:34] - Log from pilotlog.txt -
[2025-11-21 01:59:34] 2025-11-21 09:59:02,340 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894257886/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,341 | INFO     | extracted standard info from prmon json
[2025-11-21 01:59:34] 2025-11-21 09:59:02,341 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 01:59:34] 2025-11-21 09:59:02,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 01:59:34] 2025-11-21 09:59:02,342 | WARNING  | wrong length of table data, x=[1763718905.0, 1763718966.0], y=[1687.0, 492541.0] (must be same and length>=4)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | ..............................
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . Timing measurements:
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . get job = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . initial setup = 4 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . payload setup = 13 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,343 | INFO     | . stage-in = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . payload execution = 107 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . stage-out = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | . log creation = 0 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | ..............................
[2025-11-21 01:59:34] 2025-11-21 09:59:02,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 01:59:34] 2025-11-21 09:59:02,357 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894257886/pilotlog.txt
[2025-11-21 01:59:34] [end log extracts]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,392 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,393 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 01:59:34] 2025-11-21 09:59:02,716 | INFO     | 
[2025-11-21 01:59:34] 2025-11-21 09:59:02,716 | INFO     | job summary report
[2025-11-21 01:59:34] 2025-11-21 09:59:02,716 | INFO     | --------------------------------------------------
[2025-11-21 01:59:34] 2025-11-21 09:59:02,716 | INFO     | PanDA job id: 6894257886
[2025-11-21 01:59:34] 2025-11-21 09:59:02,716 | INFO     | task id: 47533967
[2025-11-21 01:59:34] 2025-11-21 09:59:02,716 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 01:56:36,214 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | pilot state: failed 
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | transexitcode: 65
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | exeerrorcode: 65
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | exitcode: 65
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | cpuconsumptiontime: 48 s
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | nevents: 0
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | neventsw: 0
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | pid: 2737073
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | pgrp: 2737073
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | corecount: 8
[2025-11-21 01:59:34] 2025-11-21 09:59:02,717 | INFO     | event service: False
[2025-11-21 01:59:34] 2025-11-21 09:59:02,718 | INFO     | sizes: {0: 2298753, 1: 2298781, 10: 2299043, 11: 2299071, 122: 2324595, 123: 2324571, 124: 2329017, 127: 2329045, 264: 2329211}
[2025-11-21 01:59:34] 2025-11-21 09:59:02,718 | INFO     | --------------------------------------------------
[2025-11-21 01:59:34] 2025-11-21 09:59:02,718 | INFO     | 
[2025-11-21 01:59:34] 2025-11-21 09:59:02,718 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 01:59:34] 2025-11-21 09:59:02,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 01:59:34] 2025-11-21 09:59:02,734 | INFO     | job 6894257886 has completed (purged errors)
[2025-11-21 01:59:34] 2025-11-21 09:59:02,734 | INFO     | overall cleanup function is called
[2025-11-21 01:59:34] 2025-11-21 09:59:03,742 | INFO     | --- collectZombieJob: --- 10, [2737073]
[2025-11-21 01:59:34] 2025-11-21 09:59:03,742 | INFO     | zombie collector waiting for pid 2737073
[2025-11-21 01:59:34] 2025-11-21 09:59:03,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 01:59:34] 2025-11-21 09:59:03,742 | INFO     | collected zombie processes
[2025-11-21 01:59:34] 2025-11-21 09:59:03,742 | INFO     | will attempt to kill all subprocesses of pid=2737073
[2025-11-21 01:59:34] 2025-11-21 09:59:04,191 | INFO     | process IDs to be killed: [2737073] (in reverse order)
[2025-11-21 01:59:34] 2025-11-21 09:59:04,284 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 01:59:34] 2025-11-21 09:59:04,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 01:59:34] 2025-11-21 09:59:04,292 | INFO     | did not find any defunct processes belonging to 2737073
[2025-11-21 01:59:34] 2025-11-21 09:59:04,298 | INFO     | did not find any defunct processes belonging to 2737073
[2025-11-21 01:59:34] 2025-11-21 09:59:04,299 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 01:59:34] 2025-11-21 09:59:04,299 | INFO     | ready for new job
[2025-11-21 01:59:34] 2025-11-21 09:59:04,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 01:59:34] 2025-11-21 09:59:04,306 | INFO     | ***************************************
[2025-11-21 01:59:34] 2025-11-21 09:59:04,307 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 01:59:34] 2025-11-21 09:59:04,307 | INFO     | ***************************************
[2025-11-21 01:59:34] 2025-11-21 09:59:04,307 | INFO     | 
[2025-11-21 01:59:34] 2025-11-21 09:59:04,308 | INFO     | architecture information:
[2025-11-21 01:59:34] 2025-11-21 09:59:04,309 | INFO     | executing command: cat /etc/os-release
[2025-11-21 01:59:34] 2025-11-21 09:59:04,323 | INFO     | cat /etc/os-release:
[2025-11-21 01:59:34] NAME="CentOS Linux"
[2025-11-21 01:59:34] VERSION="7 (Core)"
[2025-11-21 01:59:34] ID="centos"
[2025-11-21 01:59:34] ID_LIKE="rhel fedora"
[2025-11-21 01:59:34] VERSION_ID="7"
[2025-11-21 01:59:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 01:59:34] ANSI_COLOR="0;31"
[2025-11-21 01:59:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 01:59:34] HOME_URL="https://www.centos.org/"
[2025-11-21 01:59:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 01:59:34] 
[2025-11-21 01:59:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 01:59:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 01:59:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 01:59:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 01:59:34] 
[2025-11-21 01:59:34] 2025-11-21 09:59:04,323 | INFO     | ***************************************
[2025-11-21 01:59:34] 2025-11-21 09:59:04,828 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 01:59:34] 2025-11-21 09:59:04,984 | INFO     | sufficient remaining disk space (1307401256960 B)
[2025-11-21 01:59:34] 2025-11-21 09:59:04,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 01:59:34] 2025-11-21 09:59:04,985 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 01:59:34] 2025-11-21 09:59:04,985 | INFO     | update_server=False
[2025-11-21 01:59:34] 2025-11-21 09:59:04,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 01:59:34] 2025-11-21 09:59:04,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 01:59:34] 2025-11-21 09:59:04,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 01:59:34] 2025-11-21 09:59:04,993 | INFO     | aborting loop
[2025-11-21 01:59:34] 2025-11-21 09:59:05,149 | INFO     | all data control threads have been joined
[2025-11-21 01:59:34] 2025-11-21 09:59:05,874 | INFO     | all payload control threads have been joined
[2025-11-21 01:59:34] 2025-11-21 09:59:05,991 | INFO     | [job] retrieve thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:05,999 | INFO     | [job] job monitor thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,006 | INFO     | [payload] failed_post thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,103 | INFO     | [payload] validate_post thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,164 | INFO     | [data] control thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,322 | INFO     | all job control threads have been joined
[2025-11-21 01:59:34] 2025-11-21 09:59:06,517 | INFO     | [job] validate thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,852 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,880 | INFO     | [payload] control thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,956 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:06,995 | INFO     | [data] copytool_out thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:07,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:07,127 | INFO     | [data] copytool_in thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:07,167 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:07,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 01:59:34] 2025-11-21 09:59:07,330 | INFO     | [job] control thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:07,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 01:59:34] 2025-11-21 09:59:08,761 | INFO     | [job] queue monitor thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:11,303 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 01:59:34] 2025-11-21 09:59:19,061 | INFO     | [monitor] cgroup control has ended
[2025-11-21 01:59:34] 2025-11-21 09:59:19,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096832165696)>', '<ExcThread(monitor, started 140095852111616)>']
[2025-11-21 01:59:34] 2025-11-21 09:59:24,259 | INFO     | all workflow threads have been joined
[2025-11-21 01:59:34] 2025-11-21 09:59:24,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 01:59:34] 2025-11-21 09:59:24,259 | INFO     | traces error code: 0
[2025-11-21 01:59:34] 2025-11-21 09:59:24,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 01:59:34] 2025-11-21 09:59:34,145 | INFO     | PID=2724419 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 01:59:34] 2025-11-21 09:59:34,145 | INFO     | .. there are 26 such processes running
[2025-11-21 01:59:34] 2025-11-21 09:59:34,146 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 01:59:34] 2025-11-21 09:59:34,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 01:59:34] 2025-11-21 09:59:34,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 01:59:34] 2025-11-21 09:59:34,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 01:59:34] 2025-11-21 09:59:34,146 | INFO     | [monitor] control thread has ended
[2025-11-21 01:59:34] 2025-11-21 09:59:34,247 [wrapper] ==== pilot stdout END ====
[2025-11-21 01:59:34] 2025-11-21 09:59:34,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 01:59:34] 2025-11-21 09:59:34,251 [wrapper] pilotpid: 2724419
[2025-11-21 01:59:34] 2025-11-21 09:59:34,253 [wrapper] Pilot exit status: 0
[2025-11-21 01:59:34] 2025-11-21 09:59:34,276 [wrapper] pandaids: 6894257886
[2025-11-21 01:59:34] 2025-11-21 09:59:34,313 [wrapper] cleanup supervisor_pilot 2724427 2724420
[2025-11-21 01:59:34] 2025-11-21 09:59:34,315 [wrapper] Test setup, not cleaning
[2025-11-21 01:59:34] 2025-11-21 09:59:34,317 [wrapper] apfmon messages muted
[2025-11-21 01:59:34] 2025-11-21 09:59:34,319 [wrapper] ==== wrapper stdout END ====
[2025-11-21 01:59:34] 2025-11-21 09:59:34,320 [wrapper] ==== wrapper stderr END ====
[2025-11-21 01:59:34]  *** Error codes and diagnostics ***
[2025-11-21 01:59:34]     "exeErrorCode": 65,
[2025-11-21 01:59:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 01:59:34]     "pilotErrorCode": 1305,
[2025-11-21 01:59:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 01:59:34]  *** Listing of results directory ***
[2025-11-21 01:59:34] total 404668
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc    576529 Nov 20 19:09 pilot3.tar.gz
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc      5112 Nov 20 19:31 queuedata.json
[2025-11-21 01:59:34] -rwx------. 1 boinc boinc     36292 Nov 20 19:34 runpilot2-wrapper.sh
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc       100 Nov 21 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 01:59:34] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 01:53 run_atlas
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc       105 Nov 21 01:53 job.xml
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc      6444 Nov 21 01:53 init_data.xml
[2025-11-21 01:59:34] -rw-r--r--. 2 boinc boinc 410153210 Nov 21 01:53 EVNT.47493127._002165.pool.root.1
[2025-11-21 01:59:34] -rw-r--r--. 2 boinc boinc     15847 Nov 21 01:53 start_atlas.sh
[2025-11-21 01:59:34] drwxrwx--x. 2 boinc boinc      4096 Nov 21 01:53 shared
[2025-11-21 01:59:34] -rw-r--r--. 2 boinc boinc    590103 Nov 21 01:53 input.tar.gz
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc         0 Nov 21 01:53 boinc_lockfile
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc      2785 Nov 21 01:53 pandaJob.out
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc    989817 Nov 21 01:54 agis_schedconf.cvmfs.json
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc   1526164 Nov 21 01:54 agis_ddmendpoints.agis.ALL.json
[2025-11-21 01:59:34] drwx------. 5 boinc boinc      4096 Nov 21 01:54 pilot3
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc       524 Nov 21 01:56 boinc_task_state.xml
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc       994 Nov 21 01:56 memory_monitor_summary.json
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc     50144 Nov 21 01:56 log.47533967._001368.job.log.tgz.1
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc     10331 Nov 21 01:59 heartbeat.json
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc      8192 Nov 21 01:59 boinc_mmap_file
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc        23 Nov 21 01:59 wrapper_checkpoint.txt
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc       823 Nov 21 01:59 pilotlog.txt
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc        95 Nov 21 01:59 pilot_heartbeat.json
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc    102752 Nov 21 01:59 log.47533967._001368.job.log.1
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc       186 Nov 21 01:59 output.list
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc       620 Nov 21 01:59 runtime_log
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc    174080 Nov 21 01:59 result.tar.gz
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc      8634 Nov 21 01:59 runtime_log.err
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc       647 Nov 21 01:59 B5uLDmg5Wg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmByIKDmqMIJgn.diag
[2025-11-21 01:59:34] -rw-r--r--. 1 boinc boinc     22495 Nov 21 01:59 stderr.txt
[2025-11-21 01:59:34] No HITS result produced
[2025-11-21 01:59:34]  *** Contents of shared directory: ***
[2025-11-21 01:59:34] total 401316
[2025-11-21 01:59:34] -rw-r--r--. 2 boinc boinc 410153210 Nov 21 01:53 ATLAS.root_0
[2025-11-21 01:59:34] -rw-r--r--. 2 boinc boinc     15847 Nov 21 01:53 start_atlas.sh
[2025-11-21 01:59:34] -rw-r--r--. 2 boinc boinc    590103 Nov 21 01:53 input.tar.gz
[2025-11-21 01:59:34] -rw-------. 1 boinc boinc    174080 Nov 21 01:59 result.tar.gz
01:59:36 (2718783): run_atlas exited; CPU time 51.707888
01:59:36 (2718783): called boinc_finish(0)

</stderr_txt>
]]>

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