Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:08:44 (3317118): wrapper (7.7.26015): starting
05:08:44 (3317118): wrapper: running run_atlas (--nthreads 2)
[2025-11-24 05:08:44] Arguments: --nthreads 2
[2025-11-24 05:08:44] Threads: 2
[2025-11-24 05:08:44] Checking for CVMFS
[2025-11-24 05:08:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:08:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:08:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:08:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:08:44] 2.9.2.0 2377071 8012 60104 153231 2 81 36579193 36864001 0 130560 0 2574732 99.909 449152 3856 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 05:08:44] CVMFS is ok
[2025-11-24 05:08:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:08:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:08:44] Further information can be found at the LHC@home message board.
[2025-11-24 05:08:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:08:44] Checking for apptainer binary...
[2025-11-24 05:08:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:08:44] Running /usr/bin/apptainer --version
[2025-11-24 05:08:44] apptainer version 1.4.1-1.1
[2025-11-24 05:08:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:08:44] thA334a
[2025-11-24 05:08:44] apptainer works
[2025-11-24 05:08:44] Set ATHENA_PROC_NUMBER=2
[2025-11-24 05:08:44] Set ATHENA_CORE_NUMBER=2
[2025-11-24 05:08:44] Starting ATLAS job with PandaID=6893885356
[2025-11-24 05:08:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:11:01]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:11:01] ID_LIKE="rhel fedora"
[2025-11-24 17:11:01] VERSION_ID="7"
[2025-11-24 17:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:11:01] ANSI_COLOR="0;31"
[2025-11-24 17:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:11:01] HOME_URL="https://www.centos.org/"
[2025-11-24 17:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:11:01] 
[2025-11-24 17:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:11:01] 
[2025-11-24 17:11:01] 2025-11-24 16:10:21,691 | INFO     | ***************************************
[2025-11-24 17:11:01] 2025-11-24 16:10:22,194 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 17:11:01] 2025-11-24 16:10:22,202 | INFO     | sufficient remaining disk space (484706353152 B)
[2025-11-24 17:11:01] 2025-11-24 16:10:22,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:11:01] 2025-11-24 16:10:22,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:11:01] 2025-11-24 16:10:22,203 | INFO     | update_server=False
[2025-11-24 17:11:01] 2025-11-24 16:10:22,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:11:01] 2025-11-24 16:10:22,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:11:01] 2025-11-24 16:10:22,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:11:01] 2025-11-24 16:10:22,344 | INFO     | all data control threads have been joined
[2025-11-24 17:11:01] 2025-11-24 16:10:22,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:11:01] 2025-11-24 16:10:22,763 | INFO     | aborting loop
[2025-11-24 17:11:01] 2025-11-24 16:10:22,868 | INFO     | all payload control threads have been joined
[2025-11-24 17:11:01] 2025-11-24 16:10:23,208 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,209 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,350 | INFO     | [data] control thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,411 | INFO     | all job control threads have been joined
[2025-11-24 17:11:01] 2025-11-24 16:10:23,469 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,512 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,556 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,748 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,769 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:11:01] 2025-11-24 16:10:23,857 | INFO     | [job] validate thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:23,873 | INFO     | [payload] control thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:24,197 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:24,209 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:24,417 | INFO     | [job] control thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:24,767 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:27,839 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:11:01] 2025-11-24 16:10:53,250 | INFO     | PID=3320832 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 17:11:01] 2025-11-24 16:10:53,250 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:11:01] 2025-11-24 16:10:53,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:11:01] 2025-11-24 16:10:53,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:11:01] 2025-11-24 16:10:55,811 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:11:01] 2025-11-24 16:10:56,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057725613888)>', '<ExcThread(monitor, started 140057222551296)>']
[2025-11-24 17:11:01] 2025-11-24 16:10:56,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:11:01] 2025-11-24 16:10:56,267 | INFO     | [monitor] control thread has ended
[2025-11-24 17:11:01] 2025-11-24 16:11:01,132 | INFO     | all workflow threads have been joined
[2025-11-24 17:11:01] 2025-11-24 16:11:01,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:11:01] 2025-11-24 16:11:01,132 | INFO     | traces error code: 0
[2025-11-24 17:11:01] 2025-11-24 16:11:01,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:11:01] 2025-11-24 16:11:01,174 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:11:01] 2025-11-24 16:11:01,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:11:01] 2025-11-24 16:11:01,179 [wrapper] pilotpid: 3320832
[2025-11-24 17:11:01] 2025-11-24 16:11:01,181 [wrapper] Pilot exit status: 0
[2025-11-24 17:11:01] 2025-11-24 16:11:01,186 [wrapper] pandaids: 6893885356
[2025-11-24 17:11:01] 2025-11-24 16:11:01,199 [wrapper] cleanup supervisor_pilot 3398574 3320833
[2025-11-24 17:11:01] 2025-11-24 16:11:01,201 [wrapper] Test setup, not cleaning
[2025-11-24 17:11:01] 2025-11-24 16:11:01,203 [wrapper] apfmon messages muted
[2025-11-24 17:11:01] 2025-11-24 16:11:01,205 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:11:01] 2025-11-24 16:11:01,206 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:11:01]  *** Error codes and diagnostics ***
[2025-11-24 17:11:01]     "exeErrorCode": 0,
[2025-11-24 17:11:01]     "exeErrorDiag": "",
[2025-11-24 17:11:01]     "pilotErrorCode": 0,
[2025-11-24 17:11:01]     "pilotErrorDiag": "",
[2025-11-24 17:11:01]  *** Listing of results directory ***
[2025-11-24 17:11:01] total 1309772
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc    576529 Nov 20 22:55 pilot3.tar.gz
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc      5112 Nov 20 23:08 queuedata.json
[2025-11-24 17:11:01] -rwx------ 1 boinc boinc     36292 Nov 20 23:11 runpilot2-wrapper.sh
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc       100 Nov 24 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:11:01] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 05:08 run_atlas
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc       105 Nov 24 05:08 job.xml
[2025-11-24 17:11:01] -rw-r--r-- 2 boinc boinc 406181078 Nov 24 05:08 EVNT.47493127._000941.pool.root.1
[2025-11-24 17:11:01] -rw-r--r-- 2 boinc boinc    590102 Nov 24 05:08 input.tar.gz
[2025-11-24 17:11:01] -rw-r--r-- 2 boinc boinc     15847 Nov 24 05:08 start_atlas.sh
[2025-11-24 17:11:01] drwxrwx--x 2 boinc boinc      4096 Nov 24 05:08 shared
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc         0 Nov 24 05:08 boinc_setup_complete
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc      6207 Nov 24 05:08 init_data.xml
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc         0 Nov 24 05:08 boinc_lockfile
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc      2786 Nov 24 05:08 pandaJob.out
[2025-11-24 17:11:01] -rw------- 1 boinc boinc    989786 Nov 24 05:08 agis_schedconf.cvmfs.json
[2025-11-24 17:11:01] drwx------ 5 boinc boinc      4096 Nov 24 05:08 pilot3
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc       532 Nov 24 17:07 boinc_task_state.xml
[2025-11-24 17:11:01] -rw------- 1 boinc boinc 916556309 Nov 24 17:09 HITS.47523449._009408.pool.root.1
[2025-11-24 17:11:01] -rw------- 1 boinc boinc      1022 Nov 24 17:10 memory_monitor_summary.json
[2025-11-24 17:11:01] -rw------- 1 boinc boinc   1516227 Nov 24 17:10 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:11:01] -rw------- 1 boinc boinc   1210434 Nov 24 17:10 log.47523449._009408.job.log.tgz.1
[2025-11-24 17:11:01] -rw------- 1 boinc boinc        95 Nov 24 17:10 pilot_heartbeat.json
[2025-11-24 17:11:01] -rw------- 1 boinc boinc      8573 Nov 24 17:10 heartbeat.json
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc      8192 Nov 24 17:10 boinc_mmap_file
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc        28 Nov 24 17:10 wrapper_checkpoint.txt
[2025-11-24 17:11:01] -rw------- 1 boinc boinc      4752 Nov 24 17:11 pilotlog.txt
[2025-11-24 17:11:01] -rw------- 1 boinc boinc   6072548 Nov 24 17:11 log.47523449._009408.job.log.1
[2025-11-24 17:11:01] -rw------- 1 boinc boinc       353 Nov 24 17:11 output.list
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc       620 Nov 24 17:11 runtime_log
[2025-11-24 17:11:01] -rw------- 1 boinc boinc   7301120 Nov 24 17:11 result.tar.gz
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc      8903 Nov 24 17:11 runtime_log.err
[2025-11-24 17:11:01] -rw------- 1 boinc boinc       666 Nov 24 17:11 AFNODmj3Rg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml7GKDmlyjnAn.diag
[2025-11-24 17:11:01] -rw-r--r-- 1 boinc boinc      8591 Nov 24 17:11 stderr.txt
[2025-11-24 17:11:01] HITS file was successfully produced:
[2025-11-24 17:11:01] -rw------- 1 boinc boinc 916556309 Nov 24 17:09 shared/HITS.pool.root.1
[2025-11-24 17:11:01]  *** Contents of shared directory: ***
[2025-11-24 17:11:01] total 1299476
[2025-11-24 17:11:01] -rw-r--r-- 2 boinc boinc 406181078 Nov 24 05:08 ATLAS.root_0
[2025-11-24 17:11:01] -rw-r--r-- 2 boinc boinc    590102 Nov 24 05:08 input.tar.gz
[2025-11-24 17:11:01] -rw-r--r-- 2 boinc boinc     15847 Nov 24 05:08 start_atlas.sh
[2025-11-24 17:11:01] -rw------- 1 boinc boinc 916556309 Nov 24 17:09 HITS.pool.root.1
[2025-11-24 17:11:01] -rw------- 1 boinc boinc   7301120 Nov 24 17:11 result.tar.gz
17:11:02 (3317118): run_atlas exited; CPU time 85838.510451
17:11:02 (3317118): called boinc_finish(0)

</stderr_txt>
]]>

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