Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:42 (1590834): wrapper (7.7.26015): starting
05:49:42 (1590834): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 05:49:42] Arguments: --nthreads 8
[2025-11-21 05:49:42] Threads: 8
[2025-11-21 05:49:42] Checking for CVMFS
[2025-11-21 05:49:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:49:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:49:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:49:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:49:42] 2.13.2.0 6867 26543 251108 153121 2 90 22558274 40960000 4549 16776704 0 20478973 99.600 18788515 29153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 05:49:42] CVMFS is ok
[2025-11-21 05:49:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:49:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 05:49:42] Further information can be found at the LHC@home message board.
[2025-11-21 05:49:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:49:42] Checking for apptainer binary...
[2025-11-21 05:49:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 05:49:42] Running /usr/bin/apptainer --version
[2025-11-21 05:49:42] apptainer version 1.4.4-1.el9
[2025-11-21 05:49:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:49:42] c-211-11.aglt2.org
[2025-11-21 05:49:42] apptainer works
[2025-11-21 05:49:42] Set ATHENA_PROC_NUMBER=8
[2025-11-21 05:49:42] Set ATHENA_CORE_NUMBER=8
[2025-11-21 05:49:42] Starting ATLAS job with PandaID=6893883534
[2025-11-21 05:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:05:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:05:16] 2025-11-23 07:03:55,683 | INFO     | time since job start (159242s) is within the limit (172800.0s)
[2025-11-23 02:05:16] 2025-11-23 07:03:56,652 | INFO     | monitor loop #8811: job 0:6893883534 is in state 'finished'
[2025-11-23 02:05:16] 2025-11-23 07:03:56,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:05:16] 2025-11-23 07:03:57,699 | INFO     | time since job start (159244s) is within the limit (172800.0s)
[2025-11-23 02:05:16] 2025-11-23 07:03:59,169 | INFO     | monitor loop #8812: job 0:6893883534 is in state 'finished'
[2025-11-23 02:05:16] 2025-11-23 07:03:59,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:05:16] 2025-11-23 07:03:59,709 | INFO     | time since job start (159246s) is within the limit (172800.0s)
[2025-11-23 02:05:16] 2025-11-23 07:03:59,941 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 02:05:16] 2025-11-23 07:04:00,025 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2403.978729166666
[2025-11-23 02:05:16] 2025-11-23 07:04:00,168 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893883534/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:05:16] 2025-11-23 07:04:00,169 | INFO     | extracted standard info from prmon json
[2025-11-23 02:05:16] 2025-11-23 07:04:00,169 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:05:16] 2025-11-23 07:04:00,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:05:16] 2025-11-23 07:04:00,786 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:05:16] 2025-11-23 07:04:00,832 | INFO     | sum of square deviations: 5507097422186.486
[2025-11-23 02:05:16] 2025-11-23 07:04:02,195 | INFO     | time since job start (159249s) is within the limit (172800.0s)
[2025-11-23 02:05:16] 2025-11-23 07:04:02,204 | INFO     | monitor loop #8813: job 0:6893883534 is in state 'finished'
[2025-11-23 02:05:16] 2025-11-23 07:04:02,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:05:16] 2025-11-23 07:04:03,410 | INFO     | sum of deviations: -5232051697076.466
[2025-11-23 02:05:16] 2025-11-23 07:04:03,410 | INFO     | mean x: 1763801765.8608663
[2025-11-23 02:05:16] 2025-11-23 07:04:03,410 | INFO     | mean y: 2984051.6489076274
[2025-11-23 02:05:16] 2025-11-23 07:04:03,410 | INFO     | intersect: 1678694741.8576336
[2025-11-23 02:05:16] 2025-11-23 07:04:03,455 | INFO     | chi2: 44.58379493626933
[2025-11-23 02:05:16] 2025-11-23 07:04:03,502 | INFO     | sum of square deviations: 5475501264276.873
[2025-11-23 02:05:16] 2025-11-23 07:04:05,118 | INFO     | monitor loop #8814: job 0:6893883534 is in state 'finished'
[2025-11-23 02:05:16] 2025-11-23 07:04:05,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:05:16] 2025-11-23 07:04:05,357 | INFO     | sum of deviations: -4121773870628.921
[2025-11-23 02:05:16] 2025-11-23 07:04:05,358 | INFO     | mean x: 1763801613.3698156
[2025-11-23 02:05:16] 2025-11-23 07:04:05,358 | INFO     | mean y: 2989410.125576037
[2025-11-23 02:05:16] 2025-11-23 07:04:05,359 | INFO     | intersect: 1330720160.621706
[2025-11-23 02:05:16] 2025-11-23 07:04:05,366 | INFO     | chi2: 39.77348218820604
[2025-11-23 02:05:16] 2025-11-23 07:04:05,369 | INFO     | current chi2=39.77348218820604 (change=10.789374827646302 %)
[2025-11-23 02:05:16] 2025-11-23 07:04:05,369 | INFO     | right removable region: 2603
[2025-11-23 02:05:16] 2025-11-23 07:04:05,373 | INFO     | sum of square deviations: 5475493687153.149
[2025-11-23 02:05:16] 2025-11-23 07:04:06,602 | INFO     | sum of deviations: -5971975845516.916
[2025-11-23 02:05:16] 2025-11-23 07:04:06,602 | INFO     | mean x: 1763801918.3701997
[2025-11-23 02:05:16] 2025-11-23 07:04:06,602 | INFO     | mean y: 2987620.6866359445
[2025-11-23 02:05:16] 2025-11-23 07:04:06,602 | INFO     | intersect: 1926719626.3498204
[2025-11-23 02:05:16] 2025-11-23 07:04:06,606 | INFO     | chi2: 42.38186010958108
[2025-11-23 02:05:16] 2025-11-23 07:04:06,606 | INFO     | current chi2=42.38186010958108 (change=4.938868101819996 %)
[2025-11-23 02:05:16] 2025-11-23 07:04:06,607 | INFO     | left removable region: 10
[2025-11-23 02:05:16] 2025-11-23 07:04:06,612 | INFO     | sum of square deviations: 5406400604802.889
[2025-11-23 02:05:16] 2025-11-23 07:04:07,325 | INFO     | PID=1594585 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 02:05:16] 2025-11-23 07:04:07,326 | INFO     | .. there are 11 such processes running
[2025-11-23 02:05:16] 2025-11-23 07:04:07,431 | INFO     | sum of deviations: -4846449638165.406
[2025-11-23 02:05:16] 2025-11-23 07:04:07,431 | INFO     | mean x: 1763801887.8904743
[2025-11-23 02:05:16] 2025-11-23 07:04:07,432 | INFO     | mean y: 2995049.125337447
[2025-11-23 02:05:16] 2025-11-23 07:04:07,432 | INFO     | intersect: 1584116694.7851686
[2025-11-23 02:05:16] 2025-11-23 07:04:07,451 | INFO     | chi2: 36.47897862992879
[2025-11-23 02:05:16] 2025-11-23 07:04:07,451 | INFO     | current memory leak: -0.90 B/s (using 2593 data points, chi2=36.48)
[2025-11-23 02:05:16] 2025-11-23 07:04:07,454 | INFO     | could have reported an average CPU frequency of 2509 MHz (89 samples)
[2025-11-23 02:05:16] 2025-11-23 07:04:07,490 | INFO     | ..............................
[2025-11-23 02:05:16] 2025-11-23 07:04:07,490 | INFO     | . Timing measurements:
[2025-11-23 02:05:16] 2025-11-23 07:04:07,490 | INFO     | . get job = 0 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | . initial setup = 2 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | . payload setup = 5 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | . stage-in = 0 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | . payload execution = 159103 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | . stage-out = 43 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | . log creation = 15 s
[2025-11-23 02:05:16] 2025-11-23 07:04:07,491 | INFO     | ..............................
[2025-11-23 02:05:16] 2025-11-23 07:04:08,386 | INFO     | time since job start (159255s) is within the limit (172800.0s)
[2025-11-23 02:05:16] 2025-11-23 07:04:08,799 | INFO     | 
[2025-11-23 02:05:16] 2025-11-23 07:04:08,799 | INFO     | job summary report
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | --------------------------------------------------
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | PanDA job id: 6893883534
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | task id: 47523449
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | errors: (none)
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | pilot state: finished 
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | transexitcode: 0
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | exeerrorcode: 0
[2025-11-23 02:05:16] 2025-11-23 07:04:08,800 | INFO     | exeerrordiag: 
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | exitcode: 0
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | exitmsg: OK
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | cpuconsumptiontime: 354367 s
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | nevents: 1000
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | neventsw: 0
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | pid: 1605003
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | pgrp: 1605003
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | corecount: 8
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | event service: False
[2025-11-23 02:05:16] 2025-11-23 07:04:08,801 | INFO     | sizes: {0: 2298636, 1: 2298778, 4: 2299040, 11: 2299068, 159116: 2395644, 159117: 2395643, 159160: 2404821, 159164: 2404877, 159240: 2405123}
[2025-11-23 02:05:16] 2025-11-23 07:04:08,802 | INFO     | --------------------------------------------------
[2025-11-23 02:05:16] 2025-11-23 07:04:08,802 | INFO     | 
[2025-11-23 02:05:16] 2025-11-23 07:04:08,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 02:05:16] 2025-11-23 07:04:09,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:05:16] 2025-11-23 07:04:09,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:05:16] 2025-11-23 07:04:09,645 | INFO     | job 6893883534 has completed (purged errors)
[2025-11-23 02:05:16] 2025-11-23 07:04:09,645 | INFO     | overall cleanup function is called
[2025-11-23 02:05:16] 2025-11-23 07:04:10,783 | INFO     | --- collectZombieJob: --- 10, [1605003]
[2025-11-23 02:05:16] 2025-11-23 07:04:10,783 | INFO     | zombie collector waiting for pid 1605003
[2025-11-23 02:05:16] 2025-11-23 07:04:10,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:05:16] 2025-11-23 07:04:10,784 | INFO     | collected zombie processes
[2025-11-23 02:05:16] 2025-11-23 07:04:10,784 | INFO     | will attempt to kill all subprocesses of pid=1605003
[2025-11-23 02:05:16] 2025-11-23 07:04:11,998 | INFO     | process IDs to be killed: [1605003] (in reverse order)
[2025-11-23 02:05:16] 2025-11-23 07:04:13,166 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:05:16] 2025-11-23 07:04:13,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:05:16] 2025-11-23 07:04:13,322 | INFO     | did not find any defunct processes belonging to 1605003
[2025-11-23 02:05:16] 2025-11-23 07:04:13,506 | INFO     | did not find any defunct processes belonging to 1605003
[2025-11-23 02:05:16] 2025-11-23 07:04:13,688 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:05:16] 2025-11-23 07:04:13,689 | INFO     | ready for new job
[2025-11-23 02:05:16] 2025-11-23 07:04:13,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:05:16] 2025-11-23 07:04:13,886 | INFO     | ***************************************
[2025-11-23 02:05:16] 2025-11-23 07:04:13,887 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:05:16] 2025-11-23 07:04:13,887 | INFO     | ***************************************
[2025-11-23 02:05:16] 2025-11-23 07:04:13,887 | INFO     | 
[2025-11-23 02:05:16] 2025-11-23 07:04:13,977 | INFO     | architecture information:
[2025-11-23 02:05:16] 2025-11-23 07:04:14,085 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:05:16] 2025-11-23 07:04:14,300 | INFO     | cat /etc/os-release:
[2025-11-23 02:05:16] NAME="CentOS Linux"
[2025-11-23 02:05:16] VERSION="7 (Core)"
[2025-11-23 02:05:16] ID="centos"
[2025-11-23 02:05:16] ID_LIKE="rhel fedora"
[2025-11-23 02:05:16] VERSION_ID="7"
[2025-11-23 02:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:05:16] ANSI_COLOR="0;31"
[2025-11-23 02:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:05:16] HOME_URL="https://www.centos.org/"
[2025-11-23 02:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:05:16] 
[2025-11-23 02:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:05:16] 
[2025-11-23 02:05:16] 2025-11-23 07:04:14,301 | INFO     | ***************************************
[2025-11-23 02:05:16] 2025-11-23 07:04:14,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 02:05:16] 2025-11-23 07:04:14,888 | INFO     | sufficient remaining disk space (58268319744 B)
[2025-11-23 02:05:16] 2025-11-23 07:04:14,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:05:16] 2025-11-23 07:04:14,888 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:05:16] 2025-11-23 07:04:14,888 | INFO     | update_server=False
[2025-11-23 02:05:16] 2025-11-23 07:04:14,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:05:16] 2025-11-23 07:04:15,037 | INFO     | all job control threads have been joined
[2025-11-23 02:05:16] 2025-11-23 07:04:15,038 | INFO     | all payload control threads have been joined
[2025-11-23 02:05:16] 2025-11-23 07:04:15,273 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 02:05:16] 2025-11-23 07:04:15,274 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 02:05:16] 2025-11-23 07:04:15,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:05:16] 2025-11-23 07:04:15,274 | INFO     | will abort loop
[2025-11-23 02:05:16] 2025-11-23 07:04:15,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:05:16] 2025-11-23 07:04:15,894 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,043 | INFO     | [job] control thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,051 | INFO     | [payload] control thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,068 | INFO     | all data control threads have been joined
[2025-11-23 02:05:16] 2025-11-23 07:04:16,252 | INFO     | [job] validate thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,280 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:05:16] 2025-11-23 07:04:16,394 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:16,987 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,012 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,083 | INFO     | [data] control thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,150 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,281 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,392 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,460 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:17,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:05:16] 2025-11-23 07:04:18,832 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:20,387 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:05:16] 2025-11-23 07:04:43,075 | INFO     | PID=1594585 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 02:05:16] 2025-11-23 07:04:43,076 | INFO     | .. there are 11 such processes running
[2025-11-23 02:05:16] 2025-11-23 07:04:43,077 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:05:16] 2025-11-23 07:04:43,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:05:16] 2025-11-23 07:04:43,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:05:16] 2025-11-23 07:05:01,030 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:05:16] 2025-11-23 07:05:02,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502927230784)>', '<ExcThread(monitor, started 140502565365504)>']
[2025-11-23 02:05:16] 2025-11-23 07:05:03,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:05:16] 2025-11-23 07:05:03,302 | INFO     | [monitor] control thread has ended
[2025-11-23 02:05:16] 2025-11-23 07:05:07,470 | INFO     | all workflow threads have been joined
[2025-11-23 02:05:16] 2025-11-23 07:05:07,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:05:16] 2025-11-23 07:05:07,471 | INFO     | traces error code: 0
[2025-11-23 02:05:16] 2025-11-23 07:05:07,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:05:16] 2025-11-23 07:05:12,750 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:05:16] 2025-11-23 07:05:12,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:05:16] 2025-11-23 07:05:12,871 [wrapper] pilotpid: 1594585
[2025-11-23 02:05:16] 2025-11-23 07:05:12,929 [wrapper] Pilot exit status: 0
[2025-11-23 02:05:16] 2025-11-23 07:05:13,075 [wrapper] pandaids: 6893883534
[2025-11-23 02:05:16] 2025-11-23 07:05:13,447 [wrapper] cleanup supervisor_pilot 1358065 1594586
[2025-11-23 02:05:16] 2025-11-23 07:05:13,489 [wrapper] Test setup, not cleaning
[2025-11-23 02:05:16] 2025-11-23 07:05:13,524 [wrapper] apfmon messages muted
[2025-11-23 02:05:16] 2025-11-23 07:05:13,588 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:05:16] 2025-11-23 07:05:13,785 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:05:16]  *** Error codes and diagnostics ***
[2025-11-23 02:05:16]     "exeErrorCode": 0,
[2025-11-23 02:05:16]     "exeErrorDiag": "",
[2025-11-23 02:05:16]     "pilotErrorCode": 0,
[2025-11-23 02:05:16]     "pilotErrorDiag": "",
[2025-11-23 02:05:16]  *** Listing of results directory ***
[2025-11-23 02:05:16] total 1344116
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 16:12 pilot3.tar.gz
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 16:28 queuedata.json
[2025-11-23 02:05:16] -rwx------. 1 boincer umatlas     36292 Nov 20 16:29 runpilot2-wrapper.sh
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas       100 Nov 21 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:05:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 05:49 run_atlas
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas       105 Nov 21 05:49 job.xml
[2025-11-23 02:05:16] -rw-r--r--. 2 boincer umatlas 410675686 Nov 21 05:49 EVNT.47493127._000914.pool.root.1
[2025-11-23 02:05:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 05:49 start_atlas.sh
[2025-11-23 02:05:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 05:49 shared
[2025-11-23 02:05:16] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 05:49 input.tar.gz
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas         0 Nov 21 05:49 boinc_lockfile
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas      2782 Nov 21 05:49 pandaJob.out
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas        57 Nov 21 05:49 setup.sh.local
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas    989817 Nov 21 05:49 agis_schedconf.cvmfs.json
[2025-11-23 02:05:16] drwx------. 5 boincer umatlas      4096 Nov 21 05:49 pilot3
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas       533 Nov 22 23:58 boinc_task_state.xml
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas 917365887 Nov 23 01:53 HITS.47523449._009131.pool.root.1
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas      6617 Nov 23 02:00 init_data.xml
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas      1060 Nov 23 02:01 memory_monitor_summary.json
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas   1526164 Nov 23 02:02 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas   3202445 Nov 23 02:02 log.47523449._009131.job.log.tgz.1
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas      8623 Nov 23 02:04 heartbeat.json
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas        95 Nov 23 02:04 pilot_heartbeat.json
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas      5010 Nov 23 02:05 pilotlog.txt
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas  19001936 Nov 23 02:05 log.47523449._009131.job.log.1
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 02:05 boinc_mmap_file
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas       353 Nov 23 02:05 output.list
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas        29 Nov 23 02:05 wrapper_checkpoint.txt
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas       620 Nov 23 02:05 runtime_log
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas  22220800 Nov 23 02:05 result.tar.gz
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas      9344 Nov 23 02:05 runtime_log.err
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas       663 Nov 23 02:05 5P3LDmiORg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDZIKDmPuib8m.diag
[2025-11-23 02:05:16] -rw-r--r--. 1 boincer umatlas     20717 Nov 23 02:05 stderr.txt
[2025-11-23 02:05:16] HITS file was successfully produced:
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas 917365887 Nov 23 01:53 shared/HITS.pool.root.1
[2025-11-23 02:05:16]  *** Contents of shared directory: ***
[2025-11-23 02:05:16] total 1319224
[2025-11-23 02:05:16] -rw-r--r--. 2 boincer umatlas 410675686 Nov 21 05:49 ATLAS.root_0
[2025-11-23 02:05:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 05:49 start_atlas.sh
[2025-11-23 02:05:16] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 05:49 input.tar.gz
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas 917365887 Nov 23 01:53 HITS.pool.root.1
[2025-11-23 02:05:16] -rw-------. 1 boincer umatlas  22220800 Nov 23 02:05 result.tar.gz
02:05:18 (1590834): run_atlas exited; CPU time 358025.687046
02:05:18 (1590834): called boinc_finish(0)

</stderr_txt>
]]>

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