Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:35:26 (3739850): wrapper (7.7.26015): starting
04:35:26 (3739850): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 04:35:26] Arguments: --nthreads 8
[2025-11-21 04:35:26] Threads: 8
[2025-11-21 04:35:26] Checking for CVMFS
[2025-11-21 04:35:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 04:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 04:35:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 04:35:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 04:35:26] 2.13.2.0 9388 26472 178564 153117 1 81 35934439 39288833 3864 16776704 0 15455978 99.626 11977200 34259 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 04:35:26] CVMFS is ok
[2025-11-21 04:35:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 04:35:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 04:35:27] Further information can be found at the LHC@home message board.
[2025-11-21 04:35:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 04:35:27] Checking for apptainer binary...
[2025-11-21 04:35:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 04:35:27] Running /usr/bin/apptainer --version
[2025-11-21 04:35:27] apptainer version 1.4.4-1.el9
[2025-11-21 04:35:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 04:35:27] c-210-25.aglt2.org
[2025-11-21 04:35:27] apptainer works
[2025-11-21 04:35:27] Set ATHENA_PROC_NUMBER=8
[2025-11-21 04:35:27] Set ATHENA_CORE_NUMBER=8
[2025-11-21 04:35:27] Starting ATLAS job with PandaID=6893883545
[2025-11-21 04:35:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 23:06:02]  *** The last 200 lines of the pilot log: ***
[2025-11-21 23:06:03] 2025-11-22 04:05:12,916 | INFO     | monitor loop #4222: job 0:6893883545 is in state 'finished'
[2025-11-21 23:06:03] 2025-11-22 04:05:12,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:06:03] 2025-11-22 04:05:13,470 | INFO     | time since job start (66576s) is within the limit (172800.0s)
[2025-11-21 23:06:03] 2025-11-22 04:05:15,454 | INFO     | monitor loop #4223: job 0:6893883545 is in state 'finished'
[2025-11-21 23:06:03] 2025-11-22 04:05:15,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:06:03] 2025-11-22 04:05:15,482 | INFO     | time since job start (66578s) is within the limit (172800.0s)
[2025-11-21 23:06:03] 2025-11-22 04:05:17,490 | INFO     | time since job start (66580s) is within the limit (172800.0s)
[2025-11-21 23:06:03] 2025-11-22 04:05:17,979 | INFO     | monitor loop #4224: job 0:6893883545 is in state 'finished'
[2025-11-21 23:06:03] 2025-11-22 04:05:17,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:06:03] 2025-11-22 04:05:19,497 | INFO     | time since job start (66582s) is within the limit (172800.0s)
[2025-11-21 23:06:03] 2025-11-22 04:05:20,518 | INFO     | monitor loop #4225: job 0:6893883545 is in state 'finished'
[2025-11-21 23:06:03] 2025-11-22 04:05:20,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:06:03] 2025-11-22 04:05:21,510 | INFO     | time since job start (66584s) is within the limit (172800.0s)
[2025-11-21 23:06:03] 2025-11-22 04:05:23,073 | INFO     | monitor loop #4226: job 0:6893883545 is in state 'finished'
[2025-11-21 23:06:03] 2025-11-22 04:05:23,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:06:03] 2025-11-22 04:05:23,517 | INFO     | time since job start (66586s) is within the limit (172800.0s)
[2025-11-21 23:06:03] 2025-11-22 04:05:23,564 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 23:06:03] 2025-11-22 04:05:23,618 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.169475000001
[2025-11-21 23:06:03] 2025-11-22 04:05:23,725 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893883545/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 23:06:03] 2025-11-22 04:05:23,725 | INFO     | extracted standard info from prmon json
[2025-11-21 23:06:03] 2025-11-22 04:05:23,725 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 23:06:03] 2025-11-22 04:05:23,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 23:06:03] 2025-11-22 04:05:24,112 | INFO     | fitting pss+swap vs Time
[2025-11-21 23:06:03] 2025-11-22 04:05:24,114 | INFO     | sum of square deviations: 402813898720.7024
[2025-11-21 23:06:03] 2025-11-22 04:05:24,561 | INFO     | sum of deviations: -3479770356.3863373
[2025-11-21 23:06:03] 2025-11-22 04:05:24,562 | INFO     | mean x: 1763751012.1824014
[2025-11-21 23:06:03] 2025-11-22 04:05:24,562 | INFO     | mean y: 2945759.313473877
[2025-11-21 23:06:03] 2025-11-22 04:05:24,562 | INFO     | intersect: 18182196.059402097
[2025-11-21 23:06:03] 2025-11-22 04:05:24,564 | INFO     | chi2: 27.94656465964243
[2025-11-21 23:06:03] 2025-11-22 04:05:24,569 | INFO     | sum of square deviations: 397304331205.3373
[2025-11-21 23:06:03] 2025-11-22 04:05:24,641 | INFO     | sum of deviations: 457995585097.40375
[2025-11-21 23:06:03] 2025-11-22 04:05:24,641 | INFO     | mean x: 1763750859.7016575
[2025-11-21 23:06:03] 2025-11-22 04:05:24,641 | INFO     | mean y: 2958530.9456721917
[2025-11-21 23:06:03] 2025-11-22 04:05:24,641 | INFO     | intersect: -2030218667.2601595
[2025-11-21 23:06:03] 2025-11-22 04:05:24,643 | INFO     | chi2: 22.809712800735674
[2025-11-21 23:06:03] 2025-11-22 04:05:24,643 | INFO     | current chi2=22.809712800735674 (change=18.380977846357162 %)
[2025-11-21 23:06:03] 2025-11-22 04:05:24,643 | INFO     | right removable region: 1085
[2025-11-21 23:06:03] 2025-11-22 04:05:24,649 | INFO     | sum of square deviations: 397301680402.1385
[2025-11-21 23:06:03] 2025-11-22 04:05:24,717 | INFO     | sum of deviations: -279317910690.6116
[2025-11-21 23:06:03] 2025-11-22 04:05:24,718 | INFO     | mean x: 1763751164.6998158
[2025-11-21 23:06:03] 2025-11-22 04:05:24,718 | INFO     | mean y: 2953381.4521178636
[2025-11-21 23:06:03] 2025-11-22 04:05:24,718 | INFO     | intersect: 1242936282.6153862
[2025-11-21 23:06:03] 2025-11-22 04:05:24,719 | INFO     | chi2: 26.13789434726201
[2025-11-21 23:06:03] 2025-11-22 04:05:24,720 | INFO     | current chi2=26.13789434726201 (change=6.471887813074635 %)
[2025-11-21 23:06:03] 2025-11-22 04:05:24,720 | INFO     | left removable region: 10
[2025-11-21 23:06:03] 2025-11-22 04:05:24,725 | INFO     | sum of square deviations: 385355588311.55963
[2025-11-21 23:06:03] 2025-11-22 04:05:24,791 | INFO     | sum of deviations: 187603375715.29538
[2025-11-21 23:06:03] 2025-11-22 04:05:24,791 | INFO     | mean x: 1763751134.2390697
[2025-11-21 23:06:03] 2025-11-22 04:05:24,791 | INFO     | mean y: 2970111.854883721
[2025-11-21 23:06:03] 2025-11-22 04:05:24,791 | INFO     | intersect: -855680123.7747858
[2025-11-21 23:06:03] 2025-11-22 04:05:24,797 | INFO     | chi2: 20.291147828840117
[2025-11-21 23:06:03] 2025-11-22 04:05:24,798 | INFO     | current memory leak: 0.49 B/s (using 1075 data points, chi2=20.29)
[2025-11-21 23:06:03] 2025-11-22 04:05:24,799 | INFO     | could have reported an average CPU frequency of 2600 MHz (40 samples)
[2025-11-21 23:06:03] 2025-11-22 04:05:24,799 | INFO     | ..............................
[2025-11-21 23:06:03] 2025-11-22 04:05:24,799 | INFO     | . Timing measurements:
[2025-11-21 23:06:03] 2025-11-22 04:05:24,799 | INFO     | . get job = 0 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,799 | INFO     | . initial setup = 2 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,800 | INFO     | . payload setup = 5 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,800 | INFO     | . stage-in = 0 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,800 | INFO     | . payload execution = 66498 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,800 | INFO     | . stage-out = 11 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,800 | INFO     | . log creation = 3 s
[2025-11-21 23:06:03] 2025-11-22 04:05:24,800 | INFO     | ..............................
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | 
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | job summary report
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | --------------------------------------------------
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | PanDA job id: 6893883545
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | task id: 47523449
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | errors: (none)
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | pilot state: finished 
[2025-11-21 23:06:03] 2025-11-22 04:05:25,050 | INFO     | transexitcode: 0
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | exeerrorcode: 0
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | exeerrordiag: 
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | exitcode: 0
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | exitmsg: OK
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | cpuconsumptiontime: 293081 s
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | nevents: 1000
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | neventsw: 0
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | pid: 3751083
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | pgrp: 3751083
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | corecount: 8
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | event service: False
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | sizes: {0: 2298807, 4: 2299069, 11: 2299097, 66505: 2352971, 66518: 2361965, 66520: 2362021, 66572: 2362395}
[2025-11-21 23:06:03] 2025-11-22 04:05:25,051 | INFO     | --------------------------------------------------
[2025-11-21 23:06:03] 2025-11-22 04:05:25,052 | INFO     | 
[2025-11-21 23:06:03] 2025-11-22 04:05:25,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 23:06:03] 2025-11-22 04:05:25,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 23:06:03] 2025-11-22 04:05:25,346 | INFO     | job 6893883545 has completed (purged errors)
[2025-11-21 23:06:03] 2025-11-22 04:05:25,346 | INFO     | overall cleanup function is called
[2025-11-21 23:06:03] 2025-11-22 04:05:26,755 | INFO     | --- collectZombieJob: --- 10, [3751083]
[2025-11-21 23:06:03] 2025-11-22 04:05:26,755 | INFO     | zombie collector waiting for pid 3751083
[2025-11-21 23:06:03] 2025-11-22 04:05:26,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 23:06:03] 2025-11-22 04:05:26,755 | INFO     | collected zombie processes
[2025-11-21 23:06:03] 2025-11-22 04:05:26,755 | INFO     | will attempt to kill all subprocesses of pid=3751083
[2025-11-21 23:06:03] 2025-11-22 04:05:29,894 | INFO     | process IDs to be killed: [3751083] (in reverse order)
[2025-11-21 23:06:03] 2025-11-22 04:05:30,069 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 23:06:03] 2025-11-22 04:05:30,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 23:06:03] 2025-11-22 04:05:30,089 | INFO     | did not find any defunct processes belonging to 3751083
[2025-11-21 23:06:03] 2025-11-22 04:05:30,104 | INFO     | did not find any defunct processes belonging to 3751083
[2025-11-21 23:06:03] 2025-11-22 04:05:30,112 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 23:06:03] 2025-11-22 04:05:30,112 | INFO     | ready for new job
[2025-11-21 23:06:03] 2025-11-22 04:05:30,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 23:06:03] 2025-11-22 04:05:30,117 | INFO     | ***************************************
[2025-11-21 23:06:03] 2025-11-22 04:05:30,117 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 23:06:03] 2025-11-22 04:05:30,122 | INFO     | ***************************************
[2025-11-21 23:06:03] 2025-11-22 04:05:30,122 | INFO     | 
[2025-11-21 23:06:03] 2025-11-22 04:05:30,124 | INFO     | architecture information:
[2025-11-21 23:06:03] 2025-11-22 04:05:30,130 | INFO     | executing command: cat /etc/os-release
[2025-11-21 23:06:03] 2025-11-22 04:05:30,171 | INFO     | cat /etc/os-release:
[2025-11-21 23:06:03] NAME="CentOS Linux"
[2025-11-21 23:06:03] VERSION="7 (Core)"
[2025-11-21 23:06:03] ID="centos"
[2025-11-21 23:06:03] ID_LIKE="rhel fedora"
[2025-11-21 23:06:03] VERSION_ID="7"
[2025-11-21 23:06:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 23:06:03] ANSI_COLOR="0;31"
[2025-11-21 23:06:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 23:06:03] HOME_URL="https://www.centos.org/"
[2025-11-21 23:06:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 23:06:03] 
[2025-11-21 23:06:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 23:06:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 23:06:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 23:06:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 23:06:03] 
[2025-11-21 23:06:03] 2025-11-22 04:05:30,171 | INFO     | ***************************************
[2025-11-21 23:06:03] 2025-11-22 04:05:30,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 23:06:03] 2025-11-22 04:05:30,856 | INFO     | sufficient remaining disk space (47536144384 B)
[2025-11-21 23:06:03] 2025-11-22 04:05:30,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 23:06:03] 2025-11-22 04:05:30,857 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 23:06:03] 2025-11-22 04:05:30,857 | INFO     | update_server=False
[2025-11-21 23:06:03] 2025-11-22 04:05:30,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 23:06:03] 2025-11-22 04:05:30,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:06:03] 2025-11-22 04:05:31,373 | INFO     | all data control threads have been joined
[2025-11-21 23:06:03] 2025-11-22 04:05:31,778 | INFO     | all payload control threads have been joined
[2025-11-21 23:06:03] 2025-11-22 04:05:31,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:06:03] 2025-11-22 04:05:31,825 | INFO     | aborting loop
[2025-11-21 23:06:03] 2025-11-22 04:05:31,863 | INFO     | [job] retrieve thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:31,863 | INFO     | [job] queue monitor thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:31,989 | INFO     | [data] copytool_in thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,250 | INFO     | [payload] failed_post thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 23:06:03] 2025-11-22 04:05:32,351 | INFO     | [job] validate thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,366 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,421 | INFO     | [data] control thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,475 | INFO     | all job control threads have been joined
[2025-11-21 23:06:03] 2025-11-22 04:05:32,795 | INFO     | [payload] control thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:32,842 | INFO     | [job] job monitor thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:33,151 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:33,324 | INFO     | [payload] validate_post thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:33,481 | INFO     | [job] control thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:33,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 23:06:03] 2025-11-22 04:05:34,363 | INFO     | [data] copytool_out thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:38,022 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 23:06:03] 2025-11-22 04:05:40,754 | INFO     | [monitor] cgroup control has ended
[2025-11-21 23:06:03] 2025-11-22 04:05:42,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778556479296)>', '<ExcThread(monitor, started 139778049677056)>']
[2025-11-21 23:06:03] 2025-11-22 04:05:46,809 [wrapper] supervise_pilot (15 min periods counter: 75)
[2025-11-21 23:06:03] 2025-11-22 04:05:47,858 | INFO     | all workflow threads have been joined
[2025-11-21 23:06:03] 2025-11-22 04:05:47,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 23:06:03] 2025-11-22 04:05:47,858 | INFO     | traces error code: 0
[2025-11-21 23:06:03] 2025-11-22 04:05:47,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 23:06:03] 2025-11-22 04:05:58,813 | INFO     | PID=3744276 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 23:06:03] 2025-11-22 04:05:58,813 | INFO     | .. there are 10 such processes running
[2025-11-21 23:06:03] 2025-11-22 04:05:58,813 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 23:06:03] 2025-11-22 04:05:58,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 23:06:03] 2025-11-22 04:05:58,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 23:06:03] 2025-11-22 04:05:58,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 23:06:03] 2025-11-22 04:05:58,814 | INFO     | [monitor] control thread has ended
[2025-11-21 23:06:03] 2025-11-22 04:06:01,672 [wrapper] ==== pilot stdout END ====
[2025-11-21 23:06:03] 2025-11-22 04:06:01,782 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 23:06:03] 2025-11-22 04:06:01,836 [wrapper] pilotpid: 3744276
[2025-11-21 23:06:03] 2025-11-22 04:06:01,872 [wrapper] Pilot exit status: 0
[2025-11-21 23:06:03] 2025-11-22 04:06:02,015 [wrapper] pandaids: 6893883545
[2025-11-21 23:06:03] 2025-11-22 04:06:02,167 [wrapper] cleanup supervisor_pilot 1350258 3744277
[2025-11-21 23:06:03] 2025-11-22 04:06:02,179 [wrapper] Test setup, not cleaning
[2025-11-21 23:06:03] 2025-11-22 04:06:02,204 [wrapper] apfmon messages muted
[2025-11-21 23:06:03] 2025-11-22 04:06:02,255 [wrapper] ==== wrapper stdout END ====
[2025-11-21 23:06:03] 2025-11-22 04:06:02,284 [wrapper] ==== wrapper stderr END ====
[2025-11-21 23:06:03]  *** Error codes and diagnostics ***
[2025-11-21 23:06:03]     "exeErrorCode": 0,
[2025-11-21 23:06:03]     "exeErrorDiag": "",
[2025-11-21 23:06:03]     "pilotErrorCode": 0,
[2025-11-21 23:06:03]     "pilotErrorDiag": "",
[2025-11-21 23:06:03]  *** Listing of results directory ***
[2025-11-21 23:06:03] total 1332740
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 16:12 pilot3.tar.gz
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 16:35 queuedata.json
[2025-11-21 23:06:03] -rwx------. 1 boincer umatlas     36292 Nov 20 16:36 runpilot2-wrapper.sh
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas       100 Nov 21 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 23:06:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 04:35 run_atlas
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas       105 Nov 21 04:35 job.xml
[2025-11-21 23:06:03] -rw-r--r--. 2 boincer umatlas 409858200 Nov 21 04:35 EVNT.47493127._000915.pool.root.1
[2025-11-21 23:06:03] -rw-r--r--. 2 boincer umatlas    590097 Nov 21 04:35 input.tar.gz
[2025-11-21 23:06:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 04:35 start_atlas.sh
[2025-11-21 23:06:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 04:35 shared
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas         0 Nov 21 04:35 boinc_lockfile
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 04:35 pandaJob.out
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas        57 Nov 21 04:35 setup.sh.local
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas    989817 Nov 21 04:35 agis_schedconf.cvmfs.json
[2025-11-21 23:06:03] drwx------. 5 boincer umatlas      4096 Nov 21 04:35 pilot3
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas       533 Nov 21 22:23 boinc_task_state.xml
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas 929291382 Nov 21 22:59 HITS.47523449._009142.pool.root.1
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas      6661 Nov 21 23:01 init_data.xml
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas      1060 Nov 21 23:04 memory_monitor_summary.json
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas   1526164 Nov 21 23:04 agis_ddmendpoints.agis.ALL.json
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas   2212228 Nov 21 23:04 log.47523449._009142.job.log.tgz.1
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas        95 Nov 21 23:05 pilot_heartbeat.json
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas      7951 Nov 21 23:05 heartbeat.json
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas       823 Nov 21 23:05 pilotlog.txt
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 23:06 boinc_mmap_file
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas   8617494 Nov 21 23:06 log.47523449._009142.job.log.1
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas       353 Nov 21 23:06 output.list
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas       620 Nov 21 23:06 runtime_log
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas  10844160 Nov 21 23:06 result.tar.gz
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas       660 Nov 21 23:06 T0HKDmeVRg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWZIKDmj4zLjn.diag
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 23:06 runtime_log.err
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas        29 Nov 21 23:06 wrapper_checkpoint.txt
[2025-11-21 23:06:03] -rw-r--r--. 1 boincer umatlas     21742 Nov 21 23:06 stderr.txt
[2025-11-21 23:06:03] HITS file was successfully produced:
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas 929291382 Nov 21 22:59 shared/HITS.pool.root.1
[2025-11-21 23:06:03]  *** Contents of shared directory: ***
[2025-11-21 23:06:03] total 1318964
[2025-11-21 23:06:03] -rw-r--r--. 2 boincer umatlas 409858200 Nov 21 04:35 ATLAS.root_0
[2025-11-21 23:06:03] -rw-r--r--. 2 boincer umatlas    590097 Nov 21 04:35 input.tar.gz
[2025-11-21 23:06:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 04:35 start_atlas.sh
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas 929291382 Nov 21 22:59 HITS.pool.root.1
[2025-11-21 23:06:03] -rw-------. 1 boincer umatlas  10844160 Nov 21 23:06 result.tar.gz
23:06:05 (3739850): run_atlas exited; CPU time 294055.019833
23:06:05 (3739850): called boinc_finish(0)

</stderr_txt>
]]>

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