Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:37 (1289415): wrapper (7.7.26015): starting
06:39:37 (1289415): wrapper: running run_atlas (--nthreads 10)
[2025-11-21 06:39:37] Arguments: --nthreads 10
[2025-11-21 06:39:37] Threads: 10
[2025-11-21 06:39:37] Checking for CVMFS
[2025-11-21 06:39:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 06:39:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 06:39:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 06:39:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 06:39:38] 2.13.2.0 10847 28590 190000 153124 1 89 38241778 40960000 4995 16776704 0 23198969 99.713 15554896 38385 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 06:39:38] CVMFS is ok
[2025-11-21 06:39:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 06:39:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 06:39:38] Further information can be found at the LHC@home message board.
[2025-11-21 06:39:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 06:39:38] Checking for apptainer binary...
[2025-11-21 06:39:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 06:39:38] Running /usr/bin/apptainer --version
[2025-11-21 06:39:38] apptainer version 1.4.4-1.el9
[2025-11-21 06:39:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 06:39:38] c-210-35-4.aglt2.org
[2025-11-21 06:39:38] apptainer works
[2025-11-21 06:39:38] Set ATHENA_PROC_NUMBER=10
[2025-11-21 06:39:38] Set ATHENA_CORE_NUMBER=10
[2025-11-21 06:39:38] Starting ATLAS job with PandaID=6893883526
[2025-11-21 06:39:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:26:42]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:26:42] 2025-11-22 13:25:29,962 | INFO     | PID=1293101 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 08:26:42] 2025-11-22 13:25:29,962 | INFO     | .. there are 12 such processes running
[2025-11-22 08:26:42] 2025-11-22 13:25:30,963 | INFO     | time since job start (92742s) is within the limit (172800.0s)
[2025-11-22 08:26:42] 2025-11-22 13:25:31,437 | INFO     | monitor loop #5761: job 0:6893883526 is in state 'finished'
[2025-11-22 08:26:42] 2025-11-22 13:25:31,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:26:42] 2025-11-22 13:25:32,976 | INFO     | time since job start (92744s) is within the limit (172800.0s)
[2025-11-22 08:26:42] 2025-11-22 13:25:33,947 | INFO     | monitor loop #5762: job 0:6893883526 is in state 'finished'
[2025-11-22 08:26:42] 2025-11-22 13:25:33,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:26:42] 2025-11-22 13:25:35,062 | INFO     | time since job start (92747s) is within the limit (172800.0s)
[2025-11-22 08:26:42] 2025-11-22 13:25:36,453 | INFO     | monitor loop #5763: job 0:6893883526 is in state 'finished'
[2025-11-22 08:26:42] 2025-11-22 13:25:36,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:26:42] 2025-11-22 13:25:37,103 | INFO     | time since job start (92749s) is within the limit (172800.0s)
[2025-11-22 08:26:42] 2025-11-22 13:25:37,103 | INFO     | 92751s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 08:26:42] 2025-11-22 13:25:38,958 | INFO     | monitor loop #5764: job 0:6893883526 is in state 'finished'
[2025-11-22 08:26:42] 2025-11-22 13:25:38,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:26:42] 2025-11-22 13:25:39,143 | INFO     | time since job start (92751s) is within the limit (172800.0s)
[2025-11-22 08:26:42] 2025-11-22 13:25:40,571 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 08:26:42] 2025-11-22 13:25:40,626 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2819.100696428572
[2025-11-22 08:26:42] 2025-11-22 13:25:40,661 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893883526/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 08:26:42] 2025-11-22 13:25:40,661 | INFO     | extracted standard info from prmon json
[2025-11-22 08:26:42] 2025-11-22 13:25:40,662 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 08:26:42] 2025-11-22 13:25:40,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 08:26:42] 2025-11-22 13:25:40,687 | INFO     | fitting pss+swap vs Time
[2025-11-22 08:26:42] 2025-11-22 13:25:40,689 | INFO     | sum of square deviations: 1088935041101.2614
[2025-11-22 08:26:42] 2025-11-22 13:25:40,729 | INFO     | sum of deviations: -1809250661660.0906
[2025-11-22 08:26:42] 2025-11-22 13:25:40,729 | INFO     | mean x: 1763771547.6375
[2025-11-22 08:26:42] 2025-11-22 13:25:40,729 | INFO     | mean y: 3334430.5243421053
[2025-11-22 08:26:42] 2025-11-22 13:25:40,729 | INFO     | intersect: 2933816708.2855225
[2025-11-22 08:26:42] 2025-11-22 13:25:40,731 | INFO     | chi2: 30.010285580570827
[2025-11-22 08:26:42] 2025-11-22 13:25:40,733 | INFO     | sum of square deviations: 1078226487003.8569
[2025-11-22 08:26:42] 2025-11-22 13:25:40,943 | INFO     | sum of deviations: -1087589236910.2097
[2025-11-22 08:26:42] 2025-11-22 13:25:40,944 | INFO     | mean x: 1763771395.1544554
[2025-11-22 08:26:42] 2025-11-22 13:25:40,944 | INFO     | mean y: 3344706.5650165016
[2025-11-22 08:26:42] 2025-11-22 13:25:40,944 | INFO     | intersect: 1782431761.8927794
[2025-11-22 08:26:42] 2025-11-22 13:25:40,946 | INFO     | chi2: 25.158109556453212
[2025-11-22 08:26:42] 2025-11-22 13:25:40,946 | INFO     | current chi2=25.158109556453212 (change=16.168376709014048 %)
[2025-11-22 08:26:42] 2025-11-22 13:25:40,946 | INFO     | right removable region: 1514
[2025-11-22 08:26:42] 2025-11-22 13:25:41,032 | INFO     | sum of square deviations: 1078221908606.4729
[2025-11-22 08:26:42] 2025-11-22 13:25:41,146 | INFO     | sum of deviations: -2229258338842.886
[2025-11-22 08:26:42] 2025-11-22 13:25:41,146 | INFO     | mean x: 1763771700.1531353
[2025-11-22 08:26:42] 2025-11-22 13:25:41,146 | INFO     | mean y: 3340403.818481848
[2025-11-22 08:26:42] 2025-11-22 13:25:41,146 | INFO     | intersect: 3649994899.517965
[2025-11-22 08:26:42] 2025-11-22 13:25:41,148 | INFO     | chi2: 28.162460313846953
[2025-11-22 08:26:42] 2025-11-22 13:25:41,148 | INFO     | current chi2=28.162460313846953 (change=6.157306506673789 %)
[2025-11-22 08:26:42] 2025-11-22 13:25:41,148 | INFO     | left removable region: 10
[2025-11-22 08:26:42] 2025-11-22 13:25:41,150 | INFO     | sum of square deviations: 1054906408866.7498
[2025-11-22 08:26:42] 2025-11-22 13:25:41,184 | INFO     | time since job start (92753s) is within the limit (172800.0s)
[2025-11-22 08:26:42] 2025-11-22 13:25:41,202 | INFO     | sum of deviations: -1476668237007.0076
[2025-11-22 08:26:42] 2025-11-22 13:25:41,202 | INFO     | mean x: 1763771669.688165
[2025-11-22 08:26:42] 2025-11-22 13:25:41,203 | INFO     | mean y: 3354434.505319149
[2025-11-22 08:26:42] 2025-11-22 13:25:41,203 | INFO     | intersect: 2472299148.52906
[2025-11-22 08:26:42] 2025-11-22 13:25:41,204 | INFO     | chi2: 22.22831143193921
[2025-11-22 08:26:42] 2025-11-22 13:25:41,205 | INFO     | current memory leak: -1.40 B/s (using 1504 data points, chi2=22.23)
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | could have reported an average CPU frequency of 2878 MHz (54 samples)
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | ..............................
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | . Timing measurements:
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | . get job = 0 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | . initial setup = 2 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | . payload setup = 5 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,206 | INFO     | . stage-in = 0 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,207 | INFO     | . payload execution = 92692 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,207 | INFO     | . stage-out = 7 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,207 | INFO     | . log creation = 2 s
[2025-11-22 08:26:42] 2025-11-22 13:25:41,207 | INFO     | ..............................
[2025-11-22 08:26:42] 2025-11-22 13:25:42,095 | INFO     | 
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | job summary report
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | --------------------------------------------------
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | PanDA job id: 6893883526
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | task id: 47523449
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | errors: (none)
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | pilot state: finished 
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | transexitcode: 0
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | exeerrorcode: 0
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | exeerrordiag: 
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | exitcode: 0
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | exitmsg: OK
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | cpuconsumptiontime: 232429 s
[2025-11-22 08:26:42] 2025-11-22 13:25:42,096 | INFO     | nevents: 1000
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | neventsw: 0
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | pid: 1300586
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | pgrp: 1300586
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | corecount: 10
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | event service: False
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | sizes: {0: 2298585, 1: 2298784, 5: 2299046, 12: 2299102, 92701: 2367556, 92702: 2367555, 92710: 2376789, 92739: 2376979}
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | --------------------------------------------------
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | 
[2025-11-22 08:26:42] 2025-11-22 13:25:42,097 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:26:42] 2025-11-22 13:25:42,184 | INFO     | job 6893883526 has completed (purged errors)
[2025-11-22 08:26:42] 2025-11-22 13:25:42,184 | INFO     | overall cleanup function is called
[2025-11-22 08:26:42] 2025-11-22 13:25:43,215 | INFO     | --- collectZombieJob: --- 10, [1300586]
[2025-11-22 08:26:42] 2025-11-22 13:25:43,215 | INFO     | zombie collector waiting for pid 1300586
[2025-11-22 08:26:42] 2025-11-22 13:25:43,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:26:42] 2025-11-22 13:25:43,216 | INFO     | collected zombie processes
[2025-11-22 08:26:42] 2025-11-22 13:25:43,216 | INFO     | will attempt to kill all subprocesses of pid=1300586
[2025-11-22 08:26:42] 2025-11-22 13:25:43,509 | INFO     | process IDs to be killed: [1300586] (in reverse order)
[2025-11-22 08:26:42] 2025-11-22 13:25:43,846 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:26:42] 2025-11-22 13:25:43,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:26:42] 2025-11-22 13:25:43,871 | INFO     | did not find any defunct processes belonging to 1300586
[2025-11-22 08:26:42] 2025-11-22 13:25:43,889 | INFO     | did not find any defunct processes belonging to 1300586
[2025-11-22 08:26:42] 2025-11-22 13:25:43,935 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:26:42] 2025-11-22 13:25:43,935 | INFO     | ready for new job
[2025-11-22 08:26:42] 2025-11-22 13:25:43,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:26:42] 2025-11-22 13:25:43,946 | INFO     | ***************************************
[2025-11-22 08:26:42] 2025-11-22 13:25:43,946 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:26:42] 2025-11-22 13:25:43,950 | INFO     | ***************************************
[2025-11-22 08:26:42] 2025-11-22 13:25:43,950 | INFO     | 
[2025-11-22 08:26:42] 2025-11-22 13:25:43,954 | INFO     | architecture information:
[2025-11-22 08:26:42] 2025-11-22 13:25:43,960 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:26:42] 2025-11-22 13:25:44,048 | INFO     | cat /etc/os-release:
[2025-11-22 08:26:42] NAME="CentOS Linux"
[2025-11-22 08:26:42] VERSION="7 (Core)"
[2025-11-22 08:26:42] ID="centos"
[2025-11-22 08:26:42] ID_LIKE="rhel fedora"
[2025-11-22 08:26:42] VERSION_ID="7"
[2025-11-22 08:26:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:26:42] ANSI_COLOR="0;31"
[2025-11-22 08:26:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:26:42] HOME_URL="https://www.centos.org/"
[2025-11-22 08:26:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:26:42] 
[2025-11-22 08:26:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:26:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:26:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:26:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:26:42] 
[2025-11-22 08:26:42] 2025-11-22 13:25:44,054 | INFO     | ***************************************
[2025-11-22 08:26:42] 2025-11-22 13:25:44,558 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 08:26:42] 2025-11-22 13:25:44,606 | INFO     | sufficient remaining disk space (68873617408 B)
[2025-11-22 08:26:42] 2025-11-22 13:25:44,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:26:42] 2025-11-22 13:25:44,606 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:26:42] 2025-11-22 13:25:44,606 | INFO     | update_server=False
[2025-11-22 08:26:42] 2025-11-22 13:25:44,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:26:42] 2025-11-22 13:25:44,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:26:42] 2025-11-22 13:25:44,785 | INFO     | all payload control threads have been joined
[2025-11-22 08:26:42] 2025-11-22 13:25:45,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:26:42] 2025-11-22 13:25:45,062 | INFO     | aborting loop
[2025-11-22 08:26:42] 2025-11-22 13:25:45,079 | INFO     | all job control threads have been joined
[2025-11-22 08:26:42] 2025-11-22 13:25:45,082 | INFO     | all data control threads have been joined
[2025-11-22 08:26:42] 2025-11-22 13:25:45,612 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:45,793 | INFO     | [payload] control thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,068 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,088 | INFO     | [data] control thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,112 | INFO     | [job] control thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,265 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,315 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,321 | INFO     | [job] validate thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,327 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,354 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:26:42] 2025-11-22 13:25:46,580 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,613 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,625 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:46,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:26:42] 2025-11-22 13:25:47,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:48,002 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:25:50,505 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:26:42] 2025-11-22 13:26:14,789 | INFO     | PID=1293101 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 08:26:42] 2025-11-22 13:26:14,789 | INFO     | .. there are 12 such processes running
[2025-11-22 08:26:42] 2025-11-22 13:26:14,790 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:26:42] 2025-11-22 13:26:14,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:26:42] 2025-11-22 13:26:14,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:26:42] 2025-11-22 13:26:35,334 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:26:42] 2025-11-22 13:26:35,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762611443520)>', '<ExcThread(monitor, started 139761977120512)>']
[2025-11-22 08:26:42] 2025-11-22 13:26:35,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:26:42] 2025-11-22 13:26:35,954 | INFO     | [monitor] control thread has ended
[2025-11-22 08:26:42] 2025-11-22 13:26:40,670 | INFO     | all workflow threads have been joined
[2025-11-22 08:26:42] 2025-11-22 13:26:40,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:26:42] 2025-11-22 13:26:40,671 | INFO     | traces error code: 0
[2025-11-22 08:26:42] 2025-11-22 13:26:40,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:26:42] 2025-11-22 13:26:41,174 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:26:42] 2025-11-22 13:26:41,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:26:42] 2025-11-22 13:26:41,208 [wrapper] pilotpid: 1293101
[2025-11-22 08:26:42] 2025-11-22 13:26:41,225 [wrapper] Pilot exit status: 0
[2025-11-22 08:26:42] 2025-11-22 13:26:41,318 [wrapper] pandaids: 6893883526
[2025-11-22 08:26:42] 2025-11-22 13:26:41,544 [wrapper] cleanup supervisor_pilot 3710434 1293102
[2025-11-22 08:26:42] 2025-11-22 13:26:41,558 [wrapper] Test setup, not cleaning
[2025-11-22 08:26:42] 2025-11-22 13:26:41,575 [wrapper] apfmon messages muted
[2025-11-22 08:26:42] 2025-11-22 13:26:41,591 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:26:42] 2025-11-22 13:26:41,616 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:26:42]  *** Error codes and diagnostics ***
[2025-11-22 08:26:42]     "exeErrorCode": 0,
[2025-11-22 08:26:42]     "exeErrorDiag": "",
[2025-11-22 08:26:42]     "pilotErrorCode": 0,
[2025-11-22 08:26:42]     "pilotErrorDiag": "",
[2025-11-22 08:26:42]  *** Listing of results directory ***
[2025-11-22 08:26:42] total 1317804
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 16:12 pilot3.tar.gz
[2025-11-22 08:26:42] -rwx------. 1 boincer umatlas     36292 Nov 20 16:28 runpilot2-wrapper.sh
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 16:28 queuedata.json
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas       100 Nov 21 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:26:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 06:39 run_atlas
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas       105 Nov 21 06:39 job.xml
[2025-11-22 08:26:42] -rw-r--r--. 2 boincer umatlas 406750874 Nov 21 06:39 EVNT.47493127._000913.pool.root.1
[2025-11-22 08:26:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 06:39 start_atlas.sh
[2025-11-22 08:26:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 06:39 shared
[2025-11-22 08:26:42] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 06:39 input.tar.gz
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas         0 Nov 21 06:39 boinc_lockfile
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 06:39 pandaJob.out
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas        57 Nov 21 06:39 setup.sh.local
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas    989817 Nov 21 06:39 agis_schedconf.cvmfs.json
[2025-11-22 08:26:42] drwx------. 5 boincer umatlas      4096 Nov 21 06:39 pilot3
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas       533 Nov 22 07:13 boinc_task_state.xml
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas 909522485 Nov 22 08:18 HITS.47523449._009123.pool.root.1
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas      6844 Nov 22 08:21 init_data.xml
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas      1070 Nov 22 08:25 memory_monitor_summary.json
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas   1526164 Nov 22 08:25 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas   2730253 Nov 22 08:25 log.47523449._009123.job.log.tgz.1
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas      8651 Nov 22 08:25 heartbeat.json
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas        95 Nov 22 08:26 pilot_heartbeat.json
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 08:26 boinc_mmap_file
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas        29 Nov 22 08:26 wrapper_checkpoint.txt
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas      4824 Nov 22 08:26 pilotlog.txt
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas  11886474 Nov 22 08:26 log.47523449._009123.job.log.1
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas       353 Nov 22 08:26 output.list
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas       620 Nov 22 08:26 runtime_log
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas  14632960 Nov 22 08:26 result.tar.gz
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas      9355 Nov 22 08:26 runtime_log.err
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas       667 Nov 22 08:26 HjzKDmcNRg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm65GKDm73bljm.diag
[2025-11-22 08:26:42] -rw-r--r--. 1 boincer umatlas     21802 Nov 22 08:26 stderr.txt
[2025-11-22 08:26:42] HITS file was successfully produced:
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas 909522485 Nov 22 08:18 shared/HITS.pool.root.1
[2025-11-22 08:26:42]  *** Contents of shared directory: ***
[2025-11-22 08:26:42] total 1300324
[2025-11-22 08:26:42] -rw-r--r--. 2 boincer umatlas 406750874 Nov 21 06:39 ATLAS.root_0
[2025-11-22 08:26:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 06:39 start_atlas.sh
[2025-11-22 08:26:42] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 06:39 input.tar.gz
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas 909522485 Nov 22 08:18 HITS.pool.root.1
[2025-11-22 08:26:42] -rw-------. 1 boincer umatlas  14632960 Nov 22 08:26 result.tar.gz
08:27:04 (1289415): run_atlas exited; CPU time 233606.319588
08:27:04 (1289415): called boinc_finish(0)

</stderr_txt>
]]>

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