Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:21:19 (711858): wrapper (7.7.26015): starting
03:21:19 (711858): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 03:21:19] Arguments: --nthreads 12
[2025-11-23 03:21:19] Threads: 12
[2025-11-23 03:21:19] Checking for CVMFS
[2025-11-23 03:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:21:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:21:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:21:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:21:19] 2.13.3.0 14095 2129 72140 153193 0 81 2760087 4097025 827 130560 0 1620426 99.991 71146 22184 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 03:21:19] CVMFS is ok
[2025-11-23 03:21:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:21:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:21:19] Further information can be found at the LHC@home message board.
[2025-11-23 03:21:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:21:19] Checking for apptainer binary...
[2025-11-23 03:21:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 03:21:19] Running /usr/bin/apptainer --version
[2025-11-23 03:21:19] apptainer version 1.4.4-1.el9
[2025-11-23 03:21:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:21:19] pckelar7.cern.ch
[2025-11-23 03:21:19] apptainer works
[2025-11-23 03:21:19] Set ATHENA_PROC_NUMBER=12
[2025-11-23 03:21:19] Set ATHENA_CORE_NUMBER=12
[2025-11-23 03:21:19] Starting ATLAS job with PandaID=6893882025
[2025-11-23 03:21:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:09:42]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:09:42] 2025-11-23 14:09:01,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,311 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:09:42] 2025-11-23 14:09:01,316 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2833.5688333333333
[2025-11-23 15:09:42] 2025-11-23 14:09:01,321 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6893882025/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,322 | INFO     | extracted standard info from prmon json
[2025-11-23 15:09:42] 2025-11-23 14:09:01,322 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:09:42] 2025-11-23 14:09:01,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:09:42] 2025-11-23 14:09:01,342 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:09:42] 2025-11-23 14:09:01,343 | INFO     | sum of square deviations: 104545226751.63208
[2025-11-23 15:09:42] 2025-11-23 14:09:01,354 | INFO     | sum of deviations: 1437980698772.745
[2025-11-23 15:09:42] 2025-11-23 14:09:01,354 | INFO     | mean x: 1763885707.4770114
[2025-11-23 15:09:42] 2025-11-23 14:09:01,354 | INFO     | mean y: 3657260.6091954024
[2025-11-23 15:09:42] 2025-11-23 14:09:01,354 | INFO     | intersect: -24257934406.496292
[2025-11-23 15:09:42] 2025-11-23 14:09:01,355 | INFO     | chi2: 5.509263005559365
[2025-11-23 15:09:42] 2025-11-23 14:09:01,355 | INFO     | sum of square deviations: 102308443366.82489
[2025-11-23 15:09:42] 2025-11-23 14:09:01,364 | INFO     | sum of deviations: 1705493240838.194
[2025-11-23 15:09:42] 2025-11-23 14:09:01,364 | INFO     | mean x: 1763885554.984081
[2025-11-23 15:09:42] 2025-11-23 14:09:01,364 | INFO     | mean y: 3675487.6541244574
[2025-11-23 15:09:42] 2025-11-23 14:09:01,364 | INFO     | intersect: -29400494809.916477
[2025-11-23 15:09:42] 2025-11-23 14:09:01,365 | INFO     | chi2: 2.7807299173706106
[2025-11-23 15:09:42] 2025-11-23 14:09:01,365 | INFO     | current chi2=2.7807299173706106 (change=49.52628120014252 %)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,365 | INFO     | sum of square deviations: 100103800119.44737
[2025-11-23 15:09:42] 2025-11-23 14:09:01,374 | INFO     | sum of deviations: 1811850720929.424
[2025-11-23 15:09:42] 2025-11-23 14:09:01,374 | INFO     | mean x: 1763885402.4912536
[2025-11-23 15:09:42] 2025-11-23 14:09:01,374 | INFO     | mean y: 3682829.8206997085
[2025-11-23 15:09:42] 2025-11-23 14:09:01,374 | INFO     | intersect: -31922148500.53048
[2025-11-23 15:09:42] 2025-11-23 14:09:01,375 | INFO     | chi2: 2.123113317356553
[2025-11-23 15:09:42] 2025-11-23 14:09:01,375 | INFO     | current chi2=2.123113317356553 (change=23.649064078682027 %)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,375 | INFO     | right removable region: 685
[2025-11-23 15:09:42] 2025-11-23 14:09:01,375 | INFO     | sum of square deviations: 102308070901.7916
[2025-11-23 15:09:42] 2025-11-23 14:09:01,384 | INFO     | sum of deviations: 1224078330300.4126
[2025-11-23 15:09:42] 2025-11-23 14:09:01,384 | INFO     | mean x: 1763885859.9826338
[2025-11-23 15:09:42] 2025-11-23 14:09:01,384 | INFO     | mean y: 3671811.367583213
[2025-11-23 15:09:42] 2025-11-23 14:09:01,384 | INFO     | intersect: -21100571864.58506
[2025-11-23 15:09:42] 2025-11-23 14:09:01,384 | INFO     | chi2: 3.7039561832162367
[2025-11-23 15:09:42] 2025-11-23 14:09:01,385 | INFO     | current chi2=3.7039561832162367 (change=32.768572139710955 %)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,385 | INFO     | sum of square deviations: 100103223919.29016
[2025-11-23 15:09:42] 2025-11-23 14:09:01,393 | INFO     | sum of deviations: 1158497751185.1086
[2025-11-23 15:09:42] 2025-11-23 14:09:01,393 | INFO     | mean x: 1763886012.4825072
[2025-11-23 15:09:42] 2025-11-23 14:09:01,394 | INFO     | mean y: 3676343.634110787
[2025-11-23 15:09:42] 2025-11-23 14:09:01,394 | INFO     | intersect: -20409831821.25201
[2025-11-23 15:09:42] 2025-11-23 14:09:01,394 | INFO     | chi2: 3.6482451780593963
[2025-11-23 15:09:42] 2025-11-23 14:09:01,394 | INFO     | current chi2=3.6482451780593963 (change=1.504094605905006 %)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,394 | INFO     | left removable region: 20
[2025-11-23 15:09:42] 2025-11-23 14:09:01,395 | INFO     | sum of square deviations: 91188984180.0
[2025-11-23 15:09:42] 2025-11-23 14:09:01,403 | INFO     | sum of deviations: 1428181656500.9995
[2025-11-23 15:09:42] 2025-11-23 14:09:01,403 | INFO     | mean x: 1763885982.0
[2025-11-23 15:09:42] 2025-11-23 14:09:01,403 | INFO     | mean y: 3710513.154887218
[2025-11-23 15:09:42] 2025-11-23 14:09:01,403 | INFO     | intersect: -27621880738.953434
[2025-11-23 15:09:42] 2025-11-23 14:09:01,404 | INFO     | chi2: 0.20547228649825172
[2025-11-23 15:09:42] 2025-11-23 14:09:01,404 | INFO     | current memory leak: 15.66 B/s (using 665 data points, chi2=0.21)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,404 | INFO     | could have reported an average CPU frequency of 2806 MHz (26 samples)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,404 | INFO     | ..............................
[2025-11-23 15:09:42] 2025-11-23 14:09:01,404 | INFO     | . Timing measurements:
[2025-11-23 15:09:42] 2025-11-23 14:09:01,404 | INFO     | . get job = 0 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | . initial setup = 1 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | . payload setup = 5 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | . stage-in = 0 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | . payload execution = 42424 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | . stage-out = 1 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | . log creation = 0 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,405 | INFO     | ..............................
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | 
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | job summary report
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | --------------------------------------------------
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | PanDA job id: 6893882025
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | task id: 47523449
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | errors: (none)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | pilot state: finished 
[2025-11-23 15:09:42] 2025-11-23 14:09:01,471 | INFO     | transexitcode: 0
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | exeerrorcode: 0
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | exeerrordiag: 
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | exitcode: 0
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | exitmsg: OK
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | cpuconsumptiontime: 495664 s
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | nevents: 1000
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | neventsw: 0
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | pid: 723147
[2025-11-23 15:09:42] 2025-11-23 14:09:01,472 | INFO     | pgrp: 723147
[2025-11-23 15:09:42] 2025-11-23 14:09:01,473 | INFO     | corecount: 12
[2025-11-23 15:09:42] 2025-11-23 14:09:01,473 | INFO     | event service: False
[2025-11-23 15:09:42] 2025-11-23 14:09:01,473 | INFO     | sizes: {0: 2298807, 4: 2299069, 11: 2299097, 42434: 2342846, 42437: 2351896, 42441: 2352086}
[2025-11-23 15:09:42] 2025-11-23 14:09:01,473 | INFO     | --------------------------------------------------
[2025-11-23 15:09:42] 2025-11-23 14:09:01,473 | INFO     | 
[2025-11-23 15:09:42] 2025-11-23 14:09:01,473 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:09:42] 2025-11-23 14:09:01,491 | INFO     | job 6893882025 has completed (purged errors)
[2025-11-23 15:09:42] 2025-11-23 14:09:01,491 | INFO     | overall cleanup function is called
[2025-11-23 15:09:42] 2025-11-23 14:09:02,506 | INFO     | --- collectZombieJob: --- 10, [723147]
[2025-11-23 15:09:42] 2025-11-23 14:09:02,506 | INFO     | zombie collector waiting for pid 723147
[2025-11-23 15:09:42] 2025-11-23 14:09:02,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:09:42] 2025-11-23 14:09:02,507 | INFO     | collected zombie processes
[2025-11-23 15:09:42] 2025-11-23 14:09:02,507 | INFO     | will attempt to kill all subprocesses of pid=723147
[2025-11-23 15:09:42] 2025-11-23 14:09:02,614 | INFO     | process IDs to be killed: [723147] (in reverse order)
[2025-11-23 15:09:42] 2025-11-23 14:09:02,649 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:09:42] 2025-11-23 14:09:02,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:09:42] 2025-11-23 14:09:02,653 | INFO     | did not find any defunct processes belonging to 723147
[2025-11-23 15:09:42] 2025-11-23 14:09:02,656 | INFO     | did not find any defunct processes belonging to 723147
[2025-11-23 15:09:42] 2025-11-23 14:09:02,657 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:09:42] 2025-11-23 14:09:02,657 | INFO     | ready for new job
[2025-11-23 15:09:42] 2025-11-23 14:09:02,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:09:42] 2025-11-23 14:09:02,660 | INFO     | ***************************************
[2025-11-23 15:09:42] 2025-11-23 14:09:02,660 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:09:42] 2025-11-23 14:09:02,660 | INFO     | ***************************************
[2025-11-23 15:09:42] 2025-11-23 14:09:02,660 | INFO     | 
[2025-11-23 15:09:42] 2025-11-23 14:09:02,661 | INFO     | architecture information:
[2025-11-23 15:09:42] 2025-11-23 14:09:02,661 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:09:42] 2025-11-23 14:09:02,672 | INFO     | cat /etc/os-release:
[2025-11-23 15:09:42] NAME="CentOS Linux"
[2025-11-23 15:09:42] VERSION="7 (Core)"
[2025-11-23 15:09:42] ID="centos"
[2025-11-23 15:09:42] ID_LIKE="rhel fedora"
[2025-11-23 15:09:42] VERSION_ID="7"
[2025-11-23 15:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:09:42] ANSI_COLOR="0;31"
[2025-11-23 15:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:09:42] HOME_URL="https://www.centos.org/"
[2025-11-23 15:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:09:42] 
[2025-11-23 15:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:09:42] 
[2025-11-23 15:09:42] 2025-11-23 14:09:02,673 | INFO     | ***************************************
[2025-11-23 15:09:42] 2025-11-23 14:09:03,176 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-23 15:09:42] 2025-11-23 14:09:03,187 | INFO     | sufficient remaining disk space (1783411769344 B)
[2025-11-23 15:09:42] 2025-11-23 14:09:03,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:09:42] 2025-11-23 14:09:03,187 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:09:42] 2025-11-23 14:09:03,187 | INFO     | update_server=False
[2025-11-23 15:09:42] 2025-11-23 14:09:03,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:09:42] 2025-11-23 14:09:03,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:09:42] 2025-11-23 14:09:03,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:09:42] 2025-11-23 14:09:03,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:09:42] 2025-11-23 14:09:03,477 | INFO     | all payload control threads have been joined
[2025-11-23 15:09:42] 2025-11-23 14:09:03,505 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 15:09:42] 2025-11-23 14:09:03,505 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 15:09:42] 2025-11-23 14:09:03,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:09:42] 2025-11-23 14:09:03,505 | INFO     | will abort loop
[2025-11-23 15:09:42] 2025-11-23 14:09:03,958 | INFO     | all job control threads have been joined
[2025-11-23 15:09:42] 2025-11-23 14:09:04,190 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,193 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,231 | INFO     | all data control threads have been joined
[2025-11-23 15:09:42] 2025-11-23 14:09:04,301 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,483 | INFO     | [payload] control thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,510 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,719 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:04,963 | INFO     | [job] control thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,064 | INFO     | [job] validate thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,072 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,181 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,194 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,236 | INFO     | [data] control thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,309 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:05,558 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:07,194 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:09:42] 2025-11-23 14:09:33,875 | INFO     | PID=715687 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 15:09:42] 2025-11-23 14:09:33,875 | INFO     | .. there are 2 such processes running
[2025-11-23 15:09:42] 2025-11-23 14:09:33,875 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:09:42] 2025-11-23 14:09:33,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:09:42] 2025-11-23 14:09:33,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:09:42] 2025-11-23 14:09:37,053 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:09:42] 2025-11-23 14:09:37,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139620890580800)>', '<ExcThread(monitor, started 139620259985152)>']
[2025-11-23 15:09:42] 2025-11-23 14:09:37,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:09:42] 2025-11-23 14:09:37,896 | INFO     | [monitor] control thread has ended
[2025-11-23 15:09:42] 2025-11-23 14:09:42,404 | INFO     | all workflow threads have been joined
[2025-11-23 15:09:42] 2025-11-23 14:09:42,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:09:42] 2025-11-23 14:09:42,405 | INFO     | traces error code: 0
[2025-11-23 15:09:42] 2025-11-23 14:09:42,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:09:42] 2025-11-23 14:09:42,484 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:09:42] 2025-11-23 14:09:42,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:09:42] 2025-11-23 14:09:42,489 [wrapper] pilotpid: 715687
[2025-11-23 15:09:42] 2025-11-23 14:09:42,491 [wrapper] Pilot exit status: 0
[2025-11-23 15:09:42] 2025-11-23 14:09:42,499 [wrapper] pandaids: 6893882025
[2025-11-23 15:09:42] 2025-11-23 14:09:42,521 [wrapper] cleanup supervisor_pilot  951324 715688
[2025-11-23 15:09:42] 2025-11-23 14:09:42,523 [wrapper] Test setup, not cleaning
[2025-11-23 15:09:42] 2025-11-23 14:09:42,525 [wrapper] apfmon messages muted
[2025-11-23 15:09:42] 2025-11-23 14:09:42,527 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:09:42] 2025-11-23 14:09:42,529 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:09:42]  *** Error codes and diagnostics ***
[2025-11-23 15:09:42]     "exeErrorCode": 0,
[2025-11-23 15:09:42]     "exeErrorDiag": "",
[2025-11-23 15:09:42]     "pilotErrorCode": 0,
[2025-11-23 15:09:42]     "pilotErrorDiag": "",
[2025-11-23 15:09:42]  *** Listing of results directory ***
[2025-11-23 15:09:42] total 1313800
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc    576529 Nov 20 21:07 pilot3.tar.gz
[2025-11-23 15:09:42] -rwx------ 1 boinc boinc     36292 Nov 20 21:37 runpilot2-wrapper.sh
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc      5112 Nov 20 21:37 queuedata.json
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc       100 Nov 23 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:09:42] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 03:21 run_atlas
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc       105 Nov 23 03:21 job.xml
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc      6252 Nov 23 03:21 init_data.xml
[2025-11-23 15:09:42] -rw-r--r-- 2 boinc boinc 409581291 Nov 23 03:21 EVNT.47493127._000888.pool.root.1
[2025-11-23 15:09:42] drwxrwx--x 2 boinc boinc      4096 Nov 23 03:21 shared
[2025-11-23 15:09:42] -rw-r--r-- 2 boinc boinc    590092 Nov 23 03:21 input.tar.gz
[2025-11-23 15:09:42] -rw-r--r-- 2 boinc boinc     15847 Nov 23 03:21 start_atlas.sh
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc         0 Nov 23 03:21 boinc_lockfile
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc      2786 Nov 23 03:21 pandaJob.out
[2025-11-23 15:09:42] -rw------- 1 boinc boinc    989784 Nov 23 03:21 agis_schedconf.cvmfs.json
[2025-11-23 15:09:42] drwx------ 5 boinc boinc      4096 Nov 23 03:21 pilot3
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc       533 Nov 23 14:58 boinc_task_state.xml
[2025-11-23 15:09:42] -rw------- 1 boinc boinc 915404573 Nov 23 15:08 HITS.47523449._008873.pool.root.1
[2025-11-23 15:09:42] -rw------- 1 boinc boinc        95 Nov 23 15:08 pilot_heartbeat.json
[2025-11-23 15:09:42] -rw------- 1 boinc boinc      1037 Nov 23 15:08 memory_monitor_summary.json
[2025-11-23 15:09:42] -rw------- 1 boinc boinc   1526164 Nov 23 15:08 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:09:42] -rw------- 1 boinc boinc   2372460 Nov 23 15:08 log.47523449._008873.job.log.tgz.1
[2025-11-23 15:09:42] -rw------- 1 boinc boinc      8626 Nov 23 15:09 heartbeat.json
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc        29 Nov 23 15:09 wrapper_checkpoint.txt
[2025-11-23 15:09:42] -rw------- 1 boinc boinc      5010 Nov 23 15:09 pilotlog.txt
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc      8192 Nov 23 15:09 boinc_mmap_file
[2025-11-23 15:09:42] -rw------- 1 boinc boinc   5836677 Nov 23 15:09 log.47523449._008873.job.log.1
[2025-11-23 15:09:42] -rw------- 1 boinc boinc       353 Nov 23 15:09 output.list
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc       620 Nov 23 15:09 runtime_log
[2025-11-23 15:09:42] -rw------- 1 boinc boinc   8232960 Nov 23 15:09 result.tar.gz
[2025-11-23 15:09:42] -rw------- 1 boinc boinc       665 Nov 23 15:09 UCbNDmoaQg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbWIKDmbvxAvn.diag
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc      8842 Nov 23 15:09 runtime_log.err
[2025-11-23 15:09:42] -rw-r--r-- 1 boinc boinc     21267 Nov 23 15:09 stderr.txt
[2025-11-23 15:09:42] HITS file was successfully produced:
[2025-11-23 15:09:42] -rw------- 1 boinc boinc 915404573 Nov 23 15:08 shared/HITS.pool.root.1
[2025-11-23 15:09:42]  *** Contents of shared directory: ***
[2025-11-23 15:09:42] total 1302580
[2025-11-23 15:09:42] -rw-r--r-- 2 boinc boinc 409581291 Nov 23 03:21 ATLAS.root_0
[2025-11-23 15:09:42] -rw-r--r-- 2 boinc boinc    590092 Nov 23 03:21 input.tar.gz
[2025-11-23 15:09:42] -rw-r--r-- 2 boinc boinc     15847 Nov 23 03:21 start_atlas.sh
[2025-11-23 15:09:42] -rw------- 1 boinc boinc 915404573 Nov 23 15:08 HITS.pool.root.1
[2025-11-23 15:09:42] -rw------- 1 boinc boinc   8232960 Nov 23 15:09 result.tar.gz
15:09:43 (711858): run_atlas exited; CPU time 495949.041336
15:09:43 (711858): called boinc_finish(0)

</stderr_txt>
]]>

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