Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:15:25 (308590): wrapper (7.7.26015): starting
11:15:25 (308590): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 11:15:25] Arguments: --nthreads 8
[2025-11-21 11:15:25] Threads: 8
[2025-11-21 11:15:25] Checking for CVMFS
[2025-11-21 11:15:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 11:15:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 11:15:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 11:15:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 11:15:26] 2.13.2.0 1687 2369 47504 153122 0 72 2438073 4096001 0 130560 0 855505 99.972 84833 587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 11:15:26] CVMFS is ok
[2025-11-21 11:15:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 11:15:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 11:15:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 11:15:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 11:15:26] Further information can be found at the LHC@home message board.
[2025-11-21 11:15:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 11:15:26] Checking for apptainer binary...
[2025-11-21 11:15:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 11:15:26] Running /usr/bin/apptainer --version
[2025-11-21 11:15:26] apptainer version 1.4.3
[2025-11-21 11:15:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 11:15:26] lab01ubuntu
[2025-11-21 11:15:26] apptainer works
[2025-11-21 11:15:26] Set ATHENA_PROC_NUMBER=8
[2025-11-21 11:15:26] Set ATHENA_CORE_NUMBER=8
[2025-11-21 11:15:26] Starting ATLAS job with PandaID=6893882296
[2025-11-21 11:15:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:13:10]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:13:10] 2025-11-21 21:12:19,283 | INFO     | monitor loop #2706: job 0:6893882296 is in state 'finished'
[2025-11-21 21:13:10] 2025-11-21 21:12:19,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:13:10] 2025-11-21 21:12:20,191 | INFO     | time since job start (35775s) is within the limit (172800.0s)
[2025-11-21 21:13:10] 2025-11-21 21:12:20,192 | INFO     | 35781s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-21 21:13:10] 2025-11-21 21:12:21,791 | INFO     | monitor loop #2707: job 0:6893882296 is in state 'finished'
[2025-11-21 21:13:10] 2025-11-21 21:12:21,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:13:10] 2025-11-21 21:12:22,198 | INFO     | time since job start (35777s) is within the limit (172800.0s)
[2025-11-21 21:13:10] 2025-11-21 21:12:24,204 | INFO     | time since job start (35779s) is within the limit (172800.0s)
[2025-11-21 21:13:10] 2025-11-21 21:12:24,294 | INFO     | monitor loop #2708: job 0:6893882296 is in state 'finished'
[2025-11-21 21:13:10] 2025-11-21 21:12:24,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,240 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 21:13:10] 2025-11-21 21:12:25,242 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2025-11-21 21:13:10] 2025-11-21 21:12:25,246 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6893882296/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,248 | INFO     | extracted standard info from prmon json
[2025-11-21 21:13:10] 2025-11-21 21:12:25,248 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:13:10] 2025-11-21 21:12:25,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:13:10] 2025-11-21 21:12:25,269 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:13:10] 2025-11-21 21:12:25,270 | INFO     | sum of square deviations: 62397904822.5
[2025-11-21 21:13:10] 2025-11-21 21:12:25,287 | INFO     | sum of deviations: 516093398049.0002
[2025-11-21 21:13:10] 2025-11-21 21:12:25,288 | INFO     | mean x: 1763741669.5
[2025-11-21 21:13:10] 2025-11-21 21:12:25,288 | INFO     | mean y: 2863225.2832764504
[2025-11-21 21:13:10] 2025-11-21 21:12:25,288 | INFO     | intersect: -14585053373.554888
[2025-11-21 21:13:10] 2025-11-21 21:12:25,290 | INFO     | chi2: 13.557589160655924
[2025-11-21 21:13:10] 2025-11-21 21:12:25,291 | INFO     | sum of square deviations: 60814275130.0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,308 | INFO     | sum of deviations: 706850003352.9999
[2025-11-21 21:13:10] 2025-11-21 21:12:25,309 | INFO     | mean x: 1763741517.0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,309 | INFO     | mean y: 2881590.6506024096
[2025-11-21 21:13:10] 2025-11-21 21:12:25,309 | INFO     | intersect: -20497250895.353016
[2025-11-21 21:13:10] 2025-11-21 21:12:25,311 | INFO     | chi2: 10.509931392549433
[2025-11-21 21:13:10] 2025-11-21 21:12:25,311 | INFO     | current chi2=10.509931392549433 (change=22.47934888712208 %)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,311 | INFO     | right removable region: 580
[2025-11-21 21:13:10] 2025-11-21 21:12:25,313 | INFO     | sum of square deviations: 60814275130.0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,329 | INFO     | sum of deviations: 303357373517.00006
[2025-11-21 21:13:10] 2025-11-21 21:12:25,330 | INFO     | mean x: 1763741822.0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,330 | INFO     | mean y: 2883701.1841652323
[2025-11-21 21:13:10] 2025-11-21 21:12:25,331 | INFO     | intersect: -8795117845.989882
[2025-11-21 21:13:10] 2025-11-21 21:12:25,332 | INFO     | chi2: 10.014509352426504
[2025-11-21 21:13:10] 2025-11-21 21:12:25,333 | INFO     | current chi2=10.014509352426504 (change=26.13355343818372 %)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,334 | INFO     | sum of square deviations: 59257669200.0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,351 | INFO     | sum of deviations: 138289710291.00006
[2025-11-21 21:13:10] 2025-11-21 21:12:25,352 | INFO     | mean x: 1763741974.5
[2025-11-21 21:13:10] 2025-11-21 21:12:25,352 | INFO     | mean y: 2899869.8055555555
[2025-11-21 21:13:10] 2025-11-21 21:12:25,352 | INFO     | intersect: -4113147385.7567916
[2025-11-21 21:13:10] 2025-11-21 21:12:25,354 | INFO     | chi2: 8.006212904931617
[2025-11-21 21:13:10] 2025-11-21 21:12:25,354 | INFO     | current chi2=8.006212904931617 (change=20.05386761167964 %)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,354 | INFO     | left removable region: 20
[2025-11-21 21:13:10] 2025-11-21 21:12:25,356 | INFO     | sum of square deviations: 54455421020.0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,371 | INFO     | sum of deviations: 214315838430.49994
[2025-11-21 21:13:10] 2025-11-21 21:12:25,371 | INFO     | mean x: 1763742096.5
[2025-11-21 21:13:10] 2025-11-21 21:12:25,371 | INFO     | mean y: 2938984.4267857145
[2025-11-21 21:13:10] 2025-11-21 21:12:25,372 | INFO     | intersect: -6938479502.591005
[2025-11-21 21:13:10] 2025-11-21 21:12:25,373 | INFO     | chi2: 2.865185706662683
[2025-11-21 21:13:10] 2025-11-21 21:12:25,374 | INFO     | current memory leak: 3.94 B/s (using 560 data points, chi2=2.87)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,375 | INFO     | could have reported an average CPU frequency of 2893 MHz (23 samples)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,375 | INFO     | ..............................
[2025-11-21 21:13:10] 2025-11-21 21:12:25,376 | INFO     | . Timing measurements:
[2025-11-21 21:13:10] 2025-11-21 21:12:25,376 | INFO     | . get job = 0 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,376 | INFO     | . initial setup = 7 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,376 | INFO     | . payload setup = 18 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,377 | INFO     | . stage-in = 0 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,377 | INFO     | . payload execution = 35700 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,377 | INFO     | . stage-out = 4 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,377 | INFO     | . log creation = 0 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,378 | INFO     | ..............................
[2025-11-21 21:13:10] 2025-11-21 21:12:25,687 | INFO     | 
[2025-11-21 21:13:10] 2025-11-21 21:12:25,688 | INFO     | job summary report
[2025-11-21 21:13:10] 2025-11-21 21:12:25,688 | INFO     | --------------------------------------------------
[2025-11-21 21:13:10] 2025-11-21 21:12:25,688 | INFO     | PanDA job id: 6893882296
[2025-11-21 21:13:10] 2025-11-21 21:12:25,689 | INFO     | task id: 47523449
[2025-11-21 21:13:10] 2025-11-21 21:12:25,689 | INFO     | errors: (none)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:13:10] 2025-11-21 21:12:25,690 | INFO     | pilot state: finished 
[2025-11-21 21:13:10] 2025-11-21 21:12:25,690 | INFO     | transexitcode: 0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,690 | INFO     | exeerrorcode: 0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,690 | INFO     | exeerrordiag: 
[2025-11-21 21:13:10] 2025-11-21 21:12:25,691 | INFO     | exitcode: 0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,691 | INFO     | exitmsg: OK
[2025-11-21 21:13:10] 2025-11-21 21:12:25,691 | INFO     | cpuconsumptiontime: 272392 s
[2025-11-21 21:13:10] 2025-11-21 21:12:25,691 | INFO     | nevents: 1000
[2025-11-21 21:13:10] 2025-11-21 21:12:25,692 | INFO     | neventsw: 0
[2025-11-21 21:13:10] 2025-11-21 21:12:25,692 | INFO     | pid: 318741
[2025-11-21 21:13:10] 2025-11-21 21:12:25,692 | INFO     | pgrp: 318741
[2025-11-21 21:13:10] 2025-11-21 21:12:25,693 | INFO     | corecount: 8
[2025-11-21 21:13:10] 2025-11-21 21:12:25,693 | INFO     | event service: False
[2025-11-21 21:13:10] 2025-11-21 21:12:25,693 | INFO     | sizes: {0: 2298649, 1: 2298791, 12: 2298791, 15: 2299081, 23: 2299109, 35723: 2340873, 35728: 2349881, 35731: 2349937, 35746: 2350183}
[2025-11-21 21:13:10] 2025-11-21 21:12:25,693 | INFO     | --------------------------------------------------
[2025-11-21 21:13:10] 2025-11-21 21:12:25,694 | INFO     | 
[2025-11-21 21:13:10] 2025-11-21 21:12:25,694 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-11-21 21:13:10] 2025-11-21 21:12:25,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:13:10] 2025-11-21 21:12:25,752 | INFO     | job 6893882296 has completed (purged errors)
[2025-11-21 21:13:10] 2025-11-21 21:12:25,752 | INFO     | overall cleanup function is called
[2025-11-21 21:13:10] 2025-11-21 21:12:26,785 | INFO     | --- collectZombieJob: --- 10, [318741]
[2025-11-21 21:13:10] 2025-11-21 21:12:26,785 | INFO     | zombie collector waiting for pid 318741
[2025-11-21 21:13:10] 2025-11-21 21:12:26,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:13:10] 2025-11-21 21:12:26,786 | INFO     | collected zombie processes
[2025-11-21 21:13:10] 2025-11-21 21:12:26,786 | INFO     | will attempt to kill all subprocesses of pid=318741
[2025-11-21 21:13:10] 2025-11-21 21:12:26,960 | INFO     | process IDs to be killed: [318741] (in reverse order)
[2025-11-21 21:13:10] 2025-11-21 21:12:27,050 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:13:10] 2025-11-21 21:12:27,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:13:10] 2025-11-21 21:12:27,056 | INFO     | did not find any defunct processes belonging to 318741
[2025-11-21 21:13:10] 2025-11-21 21:12:27,061 | INFO     | did not find any defunct processes belonging to 318741
[2025-11-21 21:13:10] 2025-11-21 21:12:27,065 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:13:10] 2025-11-21 21:12:27,066 | INFO     | ready for new job
[2025-11-21 21:13:10] 2025-11-21 21:12:27,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:13:10] 2025-11-21 21:12:27,072 | INFO     | ***************************************
[2025-11-21 21:13:10] 2025-11-21 21:12:27,073 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:13:10] 2025-11-21 21:12:27,073 | INFO     | ***************************************
[2025-11-21 21:13:10] 2025-11-21 21:12:27,073 | INFO     | 
[2025-11-21 21:13:10] 2025-11-21 21:12:27,074 | INFO     | pilot is running in a VM
[2025-11-21 21:13:10] 2025-11-21 21:12:27,075 | INFO     | architecture information:
[2025-11-21 21:13:10] 2025-11-21 21:12:27,076 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:13:10] 2025-11-21 21:12:27,111 | INFO     | cat /etc/os-release:
[2025-11-21 21:13:10] NAME="CentOS Linux"
[2025-11-21 21:13:10] VERSION="7 (Core)"
[2025-11-21 21:13:10] ID="centos"
[2025-11-21 21:13:10] ID_LIKE="rhel fedora"
[2025-11-21 21:13:10] VERSION_ID="7"
[2025-11-21 21:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:13:10] ANSI_COLOR="0;31"
[2025-11-21 21:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:13:10] HOME_URL="https://www.centos.org/"
[2025-11-21 21:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:13:10] 
[2025-11-21 21:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:13:10] 
[2025-11-21 21:13:10] 2025-11-21 21:12:27,112 | INFO     | ***************************************
[2025-11-21 21:13:10] 2025-11-21 21:12:27,616 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-11-21 21:13:10] 2025-11-21 21:12:27,655 | INFO     | sufficient remaining disk space (15321792512 B)
[2025-11-21 21:13:10] 2025-11-21 21:12:27,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:13:10] 2025-11-21 21:12:27,656 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:13:10] 2025-11-21 21:12:27,657 | INFO     | update_server=False
[2025-11-21 21:13:10] 2025-11-21 21:12:27,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:13:10] 2025-11-21 21:12:27,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:13:10] 2025-11-21 21:12:27,762 | INFO     | all data control threads have been joined
[2025-11-21 21:13:10] 2025-11-21 21:12:27,776 | INFO     | all payload control threads have been joined
[2025-11-21 21:13:10] 2025-11-21 21:12:27,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:13:10] 2025-11-21 21:12:27,810 | INFO     | aborting loop
[2025-11-21 21:13:10] 2025-11-21 21:12:28,664 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:28,769 | INFO     | [data] control thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:28,782 | INFO     | [payload] control thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:28,795 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:28,815 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:28,837 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:29,057 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:29,165 | INFO     | all job control threads have been joined
[2025-11-21 21:13:10] 2025-11-21 21:12:29,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:29,665 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:29,666 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:29,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:13:10] 2025-11-21 21:12:29,995 | INFO     | [job] validate thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:29,995 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:30,018 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:30,171 | INFO     | [job] control thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:30,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:13:10] 2025-11-21 21:12:31,467 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:33,930 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:13:10] 2025-11-21 21:12:57,407 | INFO     | PID=312318 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 21:13:10] 2025-11-21 21:12:57,408 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:13:10] 2025-11-21 21:12:57,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:13:10] 2025-11-21 21:12:57,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:13:10] 2025-11-21 21:13:03,461 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:13:10] 2025-11-21 21:13:05,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124443585341248)>', '<ExcThread(monitor, started 124443070273280)>']
[2025-11-21 21:13:10] 2025-11-21 21:13:05,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:13:10] 2025-11-21 21:13:05,450 | INFO     | [monitor] control thread has ended
[2025-11-21 21:13:10] 2025-11-21 21:13:10,267 | INFO     | all workflow threads have been joined
[2025-11-21 21:13:10] 2025-11-21 21:13:10,267 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:13:10] 2025-11-21 21:13:10,277 | INFO     | traces error code: 0
[2025-11-21 21:13:10] 2025-11-21 21:13:10,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:13:10] 2025-11-21 21:13:10,485 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:13:10] 2025-11-21 21:13:10,495 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:13:10] 2025-11-21 21:13:10,504 [wrapper] pilotpid: 312318
[2025-11-21 21:13:10] 2025-11-21 21:13:10,513 [wrapper] Pilot exit status: 0
[2025-11-21 21:13:10] 2025-11-21 21:13:10,546 [wrapper] pandaids: 6893882296
[2025-11-21 21:13:10] 2025-11-21 21:13:10,623 [wrapper] cleanup supervisor_pilot  382107 312319
[2025-11-21 21:13:10] 2025-11-21 21:13:10,632 [wrapper] Test setup, not cleaning
[2025-11-21 21:13:10] 2025-11-21 21:13:10,641 [wrapper] apfmon messages muted
[2025-11-21 21:13:10] 2025-11-21 21:13:10,650 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:13:10] 2025-11-21 21:13:10,658 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:13:10]  *** Error codes and diagnostics ***
[2025-11-21 21:13:10]     "exeErrorCode": 0,
[2025-11-21 21:13:10]     "exeErrorDiag": "",
[2025-11-21 21:13:10]     "pilotErrorCode": 0,
[2025-11-21 21:13:10]     "pilotErrorDiag": "",
[2025-11-21 21:13:10]  *** Listing of results directory ***
[2025-11-21 21:13:10] total 1300620
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc    576529 Nov 20 20:51 pilot3.tar.gz
[2025-11-21 21:13:10] -rwx------ 1 boinc boinc     36292 Nov 20 20:51 runpilot2-wrapper.sh
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc      5112 Nov 20 20:51 queuedata.json
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc       100 Nov 21 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:13:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 11:15 run_atlas
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc       105 Nov 21 11:15 job.xml
[2025-11-21 21:13:10] -rw-r--r-- 2 boinc boinc 408383429 Nov 21 11:15 EVNT.47493127._000902.pool.root.1
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc      6315 Nov 21 11:15 init_data.xml
[2025-11-21 21:13:10] -rw-r--r-- 2 boinc boinc     15847 Nov 21 11:15 start_atlas.sh
[2025-11-21 21:13:10] drwxrwx--x 2 boinc boinc      4096 Nov 21 11:15 shared
[2025-11-21 21:13:10] -rw-r--r-- 2 boinc boinc    590098 Nov 21 11:15 input.tar.gz
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc         0 Nov 21 11:15 boinc_lockfile
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc      2785 Nov 21 11:15 pandaJob.out
[2025-11-21 21:13:10] -rw------- 1 boinc boinc    989817 Nov 21 11:16 agis_schedconf.cvmfs.json
[2025-11-21 21:13:10] drwx------ 5 boinc boinc      4096 Nov 21 11:16 pilot3
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc       532 Nov 21 20:57 boinc_task_state.xml
[2025-11-21 21:13:10] -rw------- 1 boinc boinc 905647690 Nov 21 21:11 HITS.47523449._009012.pool.root.1
[2025-11-21 21:13:10] -rw------- 1 boinc boinc      1032 Nov 21 21:11 memory_monitor_summary.json
[2025-11-21 21:13:10] -rw------- 1 boinc boinc   1526164 Nov 21 21:12 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:13:10] -rw------- 1 boinc boinc   1868428 Nov 21 21:12 log.47523449._009012.job.log.tgz.1
[2025-11-21 21:13:10] -rw------- 1 boinc boinc        95 Nov 21 21:12 pilot_heartbeat.json
[2025-11-21 21:13:10] -rw------- 1 boinc boinc      8585 Nov 21 21:12 heartbeat.json
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc        29 Nov 21 21:13 wrapper_checkpoint.txt
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc      8192 Nov 21 21:13 boinc_mmap_file
[2025-11-21 21:13:10] -rw------- 1 boinc boinc      4816 Nov 21 21:13 pilotlog.txt
[2025-11-21 21:13:10] -rw------- 1 boinc boinc   5070250 Nov 21 21:13 log.47523449._009012.job.log.1
[2025-11-21 21:13:10] -rw------- 1 boinc boinc       353 Nov 21 21:13 output.list
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc       620 Nov 21 21:13 runtime_log
[2025-11-21 21:13:10] -rw------- 1 boinc boinc   6963200 Nov 21 21:13 result.tar.gz
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc      8904 Nov 21 21:13 runtime_log.err
[2025-11-21 21:13:10] -rw------- 1 boinc boinc       656 Nov 21 21:13 RIONDmvnQg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmq5GKDm4u8k3n.diag
[2025-11-21 21:13:10] -rw-r--r-- 1 boinc boinc     21698 Nov 21 21:13 stderr.txt
[2025-11-21 21:13:10] HITS file was successfully produced:
[2025-11-21 21:13:10] -rw------- 1 boinc boinc 905647690 Nov 21 21:11 shared/HITS.pool.root.1
[2025-11-21 21:13:10]  *** Contents of shared directory: ***
[2025-11-21 21:13:10] total 1290640
[2025-11-21 21:13:10] -rw-r--r-- 2 boinc boinc 408383429 Nov 21 11:15 ATLAS.root_0
[2025-11-21 21:13:10] -rw-r--r-- 2 boinc boinc     15847 Nov 21 11:15 start_atlas.sh
[2025-11-21 21:13:10] -rw-r--r-- 2 boinc boinc    590098 Nov 21 11:15 input.tar.gz
[2025-11-21 21:13:10] -rw------- 1 boinc boinc 905647690 Nov 21 21:11 HITS.pool.root.1
[2025-11-21 21:13:10] -rw------- 1 boinc boinc   6963200 Nov 21 21:13 result.tar.gz
21:13:12 (308590): run_atlas exited; CPU time 272058.719295
21:13:12 (308590): called boinc_finish(0)

</stderr_txt>
]]>

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