Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:04:14 (2122331): wrapper (7.7.26015): starting
22:04:14 (2122331): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 22:04:14] Arguments: --nthreads 12
[2025-11-21 22:04:14] Threads: 12
[2025-11-21 22:04:14] Checking for CVMFS
[2025-11-21 22:04:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:04:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:04:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:04:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:04:14] 2.13.0.0 498242 4073 46392 153145 2 81 71992523 82903041 0 130560 0 2132335 99.984 107070 977 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 22:04:14] CVMFS is ok
[2025-11-21 22:04:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:04:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 22:04:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 22:04:15] Further information can be found at the LHC@home message board.
[2025-11-21 22:04:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:04:15] Checking for apptainer binary...
[2025-11-21 22:04:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:04:15] Running /usr/bin/apptainer --version
[2025-11-21 22:04:15] apptainer version 1.4.4
[2025-11-21 22:04:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:04:15] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-11-21 22:04:15] apptainer works
[2025-11-21 22:04:15] Set ATHENA_PROC_NUMBER=12
[2025-11-21 22:04:15] Set ATHENA_CORE_NUMBER=12
[2025-11-21 22:04:15] Starting ATLAS job with PandaID=6893864180
[2025-11-21 22:04:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 01:00:44]  *** The last 200 lines of the pilot log: ***
[2025-11-22 01:00:44] 2025-11-22 00:59:51,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,324 | INFO     | time since job start (10532s) is within the limit (172800.0s)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 01:00:44] 2025-11-22 00:59:53,815 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2239.066416666667
[2025-11-22 01:00:44] 2025-11-22 00:59:53,816 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6893864180/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,816 | INFO     | extracted standard info from prmon json
[2025-11-22 01:00:44] 2025-11-22 00:59:53,816 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 01:00:44] 2025-11-22 00:59:53,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 01:00:44] 2025-11-22 00:59:53,817 | INFO     | fitting pss+swap vs Time
[2025-11-22 01:00:44] 2025-11-22 00:59:53,817 | INFO     | sum of square deviations: 1605465467.9768791
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | sum of deviations: 50864345681.3237
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | mean x: 1763767925.0115607
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | mean y: 3483541.838150289
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | intersect: -55876199471.5065
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | chi2: 3.246796063247567
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | sum of square deviations: 1470244937.9761908
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | sum of deviations: 87684651122.11899
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | mean x: 1763767772.5119047
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | mean y: 3524393.4404761903
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | intersect: -105186677455.53049
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | chi2: 1.5170352998568433
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | current chi2=1.5170352998568433 (change=53.2759289371736 %)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,818 | INFO     | sum of square deviations: 1342838507.97546
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | sum of deviations: 82609459125.57669
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | mean x: 1763767620.01227
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | mean y: 3518317.711656442
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | intersect: -108500883549.71082
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | chi2: 1.5175719876809501
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | current chi2=1.5175719876809501 (change=-0.03537741172914824 %)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | right removable region: 162
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | sum of square deviations: 1470243717.9761908
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | sum of deviations: 12125643093.964293
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | mean x: 1763768077.5119047
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | mean y: 3526688.7678571427
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | intersect: -14542920234.92731
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | chi2: 1.7979067244749318
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | current chi2=1.7979067244749318 (change=44.62520314021207 %)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,819 | INFO     | sum of square deviations: 1342836067.97546
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | sum of deviations: 5694514148.159513
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | mean x: 1763768230.01227
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | mean y: 3534370.920245399
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | intersect: -7476010883.640702
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | chi2: 1.7897649585543738
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | current chi2=1.7897649585543738 (change=0.452846958617155 %)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | left removable region: 20
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | sum of square deviations: 887808123.4718295
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | sum of deviations: 30042552209.47888
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | mean x: 1763768199.5140846
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | mean y: 3585124.76056338
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | intersect: -59680593042.14689
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | chi2: 0.013742100528321845
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | current memory leak: 33.84 B/s (using 142 data points, chi2=0.01)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | could have reported an average CPU frequency of 3183 MHz (9 samples)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | ..............................
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . Timing measurements:
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . get job = 0 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . initial setup = 1 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . payload setup = 3 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . stage-in = 0 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . payload execution = 10504 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . stage-out = 0 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | . log creation = 0 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,820 | INFO     | ..............................
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | 
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | job summary report
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | --------------------------------------------------
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | PanDA job id: 6893864180
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | task id: 47523449
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | errors: (none)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | pilot state: finished 
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | transexitcode: 0
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | exeerrorcode: 0
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | exeerrordiag: 
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | exitcode: 0
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | exitmsg: OK
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | cpuconsumptiontime: 121329 s
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | nevents: 1000
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | neventsw: 0
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | pid: 2132618
[2025-11-22 01:00:44] 2025-11-22 00:59:53,845 | INFO     | pgrp: 2132618
[2025-11-22 01:00:44] 2025-11-22 00:59:53,846 | INFO     | corecount: 12
[2025-11-22 01:00:44] 2025-11-22 00:59:53,846 | INFO     | event service: False
[2025-11-22 01:00:44] 2025-11-22 00:59:53,846 | INFO     | sizes: {0: 2298808, 3: 2299070, 11: 2299098, 10511: 2329128, 10512: 2338136, 10513: 2338192, 10519: 2338630}
[2025-11-22 01:00:44] 2025-11-22 00:59:53,846 | INFO     | --------------------------------------------------
[2025-11-22 01:00:44] 2025-11-22 00:59:53,846 | INFO     | 
[2025-11-22 01:00:44] 2025-11-22 00:59:53,846 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | job 6893864180 has completed (purged errors)
[2025-11-22 01:00:44] 2025-11-22 00:59:53,853 | INFO     | overall cleanup function is called
[2025-11-22 01:00:44] 2025-11-22 00:59:54,364 | INFO     | PID=2126061 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 01:00:44] 2025-11-22 00:59:54,858 | INFO     | --- collectZombieJob: --- 10, [2132618]
[2025-11-22 01:00:44] 2025-11-22 00:59:54,858 | INFO     | zombie collector waiting for pid 2132618
[2025-11-22 01:00:44] 2025-11-22 00:59:54,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 01:00:44] 2025-11-22 00:59:54,859 | INFO     | collected zombie processes
[2025-11-22 01:00:44] 2025-11-22 00:59:54,859 | INFO     | will attempt to kill all subprocesses of pid=2132618
[2025-11-22 01:00:44] 2025-11-22 00:59:54,896 | INFO     | process IDs to be killed: [2132618] (in reverse order)
[2025-11-22 01:00:44] 2025-11-22 00:59:54,911 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 01:00:44] 2025-11-22 00:59:54,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 01:00:44] 2025-11-22 00:59:54,912 | INFO     | did not find any defunct processes belonging to 2132618
[2025-11-22 01:00:44] 2025-11-22 00:59:54,913 | INFO     | did not find any defunct processes belonging to 2132618
[2025-11-22 01:00:44] 2025-11-22 00:59:54,913 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 01:00:44] 2025-11-22 00:59:54,913 | INFO     | ready for new job
[2025-11-22 01:00:44] 2025-11-22 00:59:54,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 01:00:44] 2025-11-22 00:59:54,914 | INFO     | ***************************************
[2025-11-22 01:00:44] 2025-11-22 00:59:54,914 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 01:00:44] 2025-11-22 00:59:54,914 | INFO     | ***************************************
[2025-11-22 01:00:44] 2025-11-22 00:59:54,914 | INFO     | 
[2025-11-22 01:00:44] 2025-11-22 00:59:54,914 | INFO     | architecture information:
[2025-11-22 01:00:44] 2025-11-22 00:59:54,914 | INFO     | executing command: cat /etc/os-release
[2025-11-22 01:00:44] 2025-11-22 00:59:54,918 | INFO     | cat /etc/os-release:
[2025-11-22 01:00:44] NAME="CentOS Linux"
[2025-11-22 01:00:44] VERSION="7 (Core)"
[2025-11-22 01:00:44] ID="centos"
[2025-11-22 01:00:44] ID_LIKE="rhel fedora"
[2025-11-22 01:00:44] VERSION_ID="7"
[2025-11-22 01:00:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 01:00:44] ANSI_COLOR="0;31"
[2025-11-22 01:00:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 01:00:44] HOME_URL="https://www.centos.org/"
[2025-11-22 01:00:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 01:00:44] 
[2025-11-22 01:00:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 01:00:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 01:00:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 01:00:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 01:00:44] 
[2025-11-22 01:00:44] 2025-11-22 00:59:54,919 | INFO     | ***************************************
[2025-11-22 01:00:44] 2025-11-22 00:59:55,422 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-22 01:00:44] 2025-11-22 00:59:55,440 | INFO     | sufficient remaining disk space (728465670144 B)
[2025-11-22 01:00:44] 2025-11-22 00:59:55,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 01:00:44] 2025-11-22 00:59:55,441 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 01:00:44] 2025-11-22 00:59:55,441 | INFO     | update_server=False
[2025-11-22 01:00:44] 2025-11-22 00:59:55,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 01:00:44] 2025-11-22 00:59:55,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:00:44] 2025-11-22 00:59:55,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:00:44] 2025-11-22 00:59:55,442 | INFO     | aborting loop
[2025-11-22 01:00:44] 2025-11-22 00:59:55,955 | INFO     | all data control threads have been joined
[2025-11-22 01:00:44] 2025-11-22 00:59:56,069 | INFO     | all payload control threads have been joined
[2025-11-22 01:00:44] 2025-11-22 00:59:56,446 | INFO     | [job] retrieve thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:56,447 | INFO     | [job] queue monitor thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:56,448 | INFO     | [job] job monitor thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:56,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 01:00:44] 2025-11-22 00:59:56,798 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:56,840 | INFO     | [payload] failed_post thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:56,961 | INFO     | [data] control thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:57,074 | INFO     | [payload] control thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:57,092 | INFO     | all job control threads have been joined
[2025-11-22 01:00:44] 2025-11-22 00:59:57,499 | INFO     | [data] copytool_in thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:57,521 | INFO     | [payload] validate_post thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:57,597 | INFO     | [job] validate thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:57,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 01:00:44] 2025-11-22 00:59:57,851 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:57,942 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:58,098 | INFO     | [job] control thread has finished
[2025-11-22 01:00:44] 2025-11-22 00:59:58,560 | INFO     | [data] copytool_out thread has finished
[2025-11-22 01:00:44] 2025-11-22 01:00:01,789 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 01:00:44] 2025-11-22 01:00:06,097 | INFO     | job.realtimelogging is not enabled
[2025-11-22 01:00:44] 2025-11-22 01:00:07,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 01:00:44] 2025-11-22 01:00:26,461 | INFO     | PID=2126061 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 01:00:44] 2025-11-22 01:00:26,461 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 01:00:44] 2025-11-22 01:00:26,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 01:00:44] 2025-11-22 01:00:26,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 01:00:44] 2025-11-22 01:00:38,467 | INFO     | [monitor] cgroup control has ended
[2025-11-22 01:00:44] 2025-11-22 01:00:39,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126737922615104)>', '<ExcThread(monitor, started 126737650259712)>']
[2025-11-22 01:00:44] 2025-11-22 01:00:40,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 01:00:44] 2025-11-22 01:00:40,532 | INFO     | [monitor] control thread has ended
[2025-11-22 01:00:44] 2025-11-22 01:00:44,771 | INFO     | all workflow threads have been joined
[2025-11-22 01:00:44] 2025-11-22 01:00:44,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 01:00:44] 2025-11-22 01:00:44,771 | INFO     | traces error code: 0
[2025-11-22 01:00:44] 2025-11-22 01:00:44,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 01:00:44] 2025-11-22 01:00:44,812 [wrapper] ==== pilot stdout END ====
[2025-11-22 01:00:44] 2025-11-22 01:00:44,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 01:00:44] 2025-11-22 01:00:44,814 [wrapper] pilotpid: 2126061
[2025-11-22 01:00:44] 2025-11-22 01:00:44,815 [wrapper] Pilot exit status: 0
[2025-11-22 01:00:44] 2025-11-22 01:00:44,817 [wrapper] pandaids: 6893864180
[2025-11-22 01:00:44] 2025-11-22 01:00:44,826 [wrapper] cleanup supervisor_pilot 2200079 2126062
[2025-11-22 01:00:44] 2025-11-22 01:00:44,827 [wrapper] Test setup, not cleaning
[2025-11-22 01:00:44] 2025-11-22 01:00:44,828 [wrapper] apfmon messages muted
[2025-11-22 01:00:44] 2025-11-22 01:00:44,829 [wrapper] ==== wrapper stdout END ====
[2025-11-22 01:00:44] 2025-11-22 01:00:44,830 [wrapper] ==== wrapper stderr END ====
[2025-11-22 01:00:44]  *** Error codes and diagnostics ***
[2025-11-22 01:00:44]     "exeErrorCode": 0,
[2025-11-22 01:00:44]     "exeErrorDiag": "",
[2025-11-22 01:00:44]     "pilotErrorCode": 0,
[2025-11-22 01:00:44]     "pilotErrorDiag": "",
[2025-11-22 01:00:44]  *** Listing of results directory ***
[2025-11-22 01:00:44] total 1302252
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:06 pilot3.tar.gz
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:17 queuedata.json
[2025-11-22 01:00:44] -rwx------ 1 boinc boinc     36292 Nov 20 14:18 runpilot2-wrapper.sh
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc       100 Nov 21 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 01:00:44] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 22:04 run_atlas
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc       105 Nov 21 22:04 job.xml
[2025-11-22 01:00:44] -rw-r--r-- 2 boinc boinc 411025077 Nov 21 22:04 EVNT.47493127._000601.pool.root.1
[2025-11-22 01:00:44] -rw-r--r-- 2 boinc boinc     15847 Nov 21 22:04 start_atlas.sh
[2025-11-22 01:00:44] drwxrwx--x 2 boinc boinc      4096 Nov 21 22:04 shared
[2025-11-22 01:00:44] -rw-r--r-- 2 boinc boinc    590101 Nov 21 22:04 input.tar.gz
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc      9907 Nov 21 22:04 init_data.xml
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:04 boinc_lockfile
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc      2783 Nov 21 22:04 pandaJob.out
[2025-11-22 01:00:44] -rw------- 1 boinc boinc    989798 Nov 21 22:04 agis_schedconf.cvmfs.json
[2025-11-22 01:00:44] -rw------- 1 boinc boinc   1526164 Nov 21 22:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 01:00:44] drwx------ 5 boinc boinc      4096 Nov 21 22:04 pilot3
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc       532 Nov 22 00:56 boinc_task_state.xml
[2025-11-22 01:00:44] -rw------- 1 boinc boinc 911673093 Nov 22 00:59 HITS.47523449._006001.pool.root.1
[2025-11-22 01:00:44] -rw------- 1 boinc boinc      1050 Nov 22 00:59 memory_monitor_summary.json
[2025-11-22 01:00:44] -rw------- 1 boinc boinc        95 Nov 22 00:59 pilot_heartbeat.json
[2025-11-22 01:00:44] -rw------- 1 boinc boinc   1918457 Nov 22 00:59 log.47523449._006001.job.log.tgz.1
[2025-11-22 01:00:44] -rw------- 1 boinc boinc      8581 Nov 22 00:59 heartbeat.json
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc        29 Nov 22 01:00 wrapper_checkpoint.txt
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc      8192 Nov 22 01:00 boinc_mmap_file
[2025-11-22 01:00:44] -rw------- 1 boinc boinc      4828 Nov 22 01:00 pilotlog.txt
[2025-11-22 01:00:44] -rw------- 1 boinc boinc   1521805 Nov 22 01:00 log.47523449._006001.job.log.1
[2025-11-22 01:00:44] -rw------- 1 boinc boinc       353 Nov 22 01:00 output.list
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc       620 Nov 22 01:00 runtime_log
[2025-11-22 01:00:44] -rw------- 1 boinc boinc   3461120 Nov 22 01:00 result.tar.gz
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc      9048 Nov 22 01:00 runtime_log.err
[2025-11-22 01:00:44] -rw------- 1 boinc boinc       657 Nov 22 01:00 i3fLDmOfKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo3HKDmyRD7Bo.diag
[2025-11-22 01:00:44] -rw-r--r-- 1 boinc boinc     21645 Nov 22 01:00 stderr.txt
[2025-11-22 01:00:44] HITS file was successfully produced:
[2025-11-22 01:00:44] -rw------- 1 boinc boinc 911673093 Nov 22 00:59 shared/HITS.pool.root.1
[2025-11-22 01:00:44]  *** Contents of shared directory: ***
[2025-11-22 01:00:44] total 1295684
[2025-11-22 01:00:44] -rw-r--r-- 2 boinc boinc 411025077 Nov 21 22:04 ATLAS.root_0
[2025-11-22 01:00:44] -rw-r--r-- 2 boinc boinc     15847 Nov 21 22:04 start_atlas.sh
[2025-11-22 01:00:44] -rw-r--r-- 2 boinc boinc    590101 Nov 21 22:04 input.tar.gz
[2025-11-22 01:00:44] -rw------- 1 boinc boinc 911673093 Nov 22 00:59 HITS.pool.root.1
[2025-11-22 01:00:44] -rw------- 1 boinc boinc   3461120 Nov 22 01:00 result.tar.gz
01:00:46 (2122331): run_atlas exited; CPU time 120903.307822
01:00:46 (2122331): called boinc_finish(0)

</stderr_txt>
]]>

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