Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:55:50 (1902938): wrapper (7.7.26015): starting
02:55:50 (1902938): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 02:55:50] Arguments: --nthreads 9
[2025-11-21 02:55:50] Threads: 9
[2025-11-21 02:55:50] Checking for CVMFS
[2025-11-21 02:55:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 02:55:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 02:55:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 02:55:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 02:55:50] 2.13.2.0 3557600 15375 214148 153113 2 236 28678766 40960001 14589 16776704 0 154177857 99.713 112683815 47938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 02:55:50] CVMFS is ok
[2025-11-21 02:55:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 02:55:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 02:55:50] Further information can be found at the LHC@home message board.
[2025-11-21 02:55:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 02:55:50] Checking for apptainer binary...
[2025-11-21 02:55:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 02:55:50] Running /usr/bin/apptainer --version
[2025-11-21 02:55:50] apptainer version 1.4.4-1.el9
[2025-11-21 02:55:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 02:55:50] c-208-40.aglt2.org
[2025-11-21 02:55:50] apptainer works
[2025-11-21 02:55:50] Set ATHENA_PROC_NUMBER=9
[2025-11-21 02:55:50] Set ATHENA_CORE_NUMBER=9
[2025-11-21 02:55:51] Starting ATLAS job with PandaID=6893850467
[2025-11-21 02:55:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 07:52:39]  *** The last 200 lines of the pilot log: ***
[2025-11-21 07:52:39] 2025-11-21 12:51:32,192 | INFO     | monitor loop #1184: job 0:6893850467 is in state 'finished'
[2025-11-21 07:52:39] 2025-11-21 12:51:32,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,114 | INFO     | time since job start (17731s) is within the limit (172800.0s)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,634 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 07:52:39] 2025-11-21 12:51:34,640 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.990874999999
[2025-11-21 07:52:39] 2025-11-21 12:51:34,652 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6893850467/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,653 | INFO     | extracted standard info from prmon json
[2025-11-21 07:52:39] 2025-11-21 12:51:34,653 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 07:52:39] 2025-11-21 12:51:34,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 07:52:39] 2025-11-21 12:51:34,656 | INFO     | fitting pss+swap vs Time
[2025-11-21 07:52:39] 2025-11-21 12:51:34,656 | INFO     | sum of square deviations: 7563233290.082774
[2025-11-21 07:52:39] 2025-11-21 12:51:34,657 | INFO     | sum of deviations: 34543460974.14482
[2025-11-21 07:52:39] 2025-11-21 12:51:34,657 | INFO     | mean x: 1763720610.262069
[2025-11-21 07:52:39] 2025-11-21 12:51:34,657 | INFO     | mean y: 2965549.45862069
[2025-11-21 07:52:39] 2025-11-21 12:51:34,657 | INFO     | intersect: -8052453572.647539
[2025-11-21 07:52:39] 2025-11-21 12:51:34,658 | INFO     | chi2: 8.879074171510917
[2025-11-21 07:52:39] 2025-11-21 12:51:34,658 | INFO     | sum of square deviations: 7178837669.628075
[2025-11-21 07:52:39] 2025-11-21 12:51:34,659 | INFO     | sum of deviations: 139715425668.916
[2025-11-21 07:52:39] 2025-11-21 12:51:34,659 | INFO     | mean x: 1763720457.7754385
[2025-11-21 07:52:39] 2025-11-21 12:51:34,659 | INFO     | mean y: 3007283.8736842107
[2025-11-21 07:52:39] 2025-11-21 12:51:34,659 | INFO     | intersect: -34322738172.331535
[2025-11-21 07:52:39] 2025-11-21 12:51:34,659 | INFO     | chi2: 5.148370578139514
[2025-11-21 07:52:39] 2025-11-21 12:51:34,659 | INFO     | current chi2=5.148370578139514 (change=42.01680852426716 %)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,660 | INFO     | sum of square deviations: 6807698111.56787
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | sum of deviations: 228559215917.12143
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | mean x: 1763720305.2892857
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | mean y: 3043657.307142857
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | intersect: -59211469599.24273
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | chi2: 2.254814580405373
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | current chi2=2.254814580405373 (change=56.20333567324122 %)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,661 | INFO     | sum of square deviations: 6449445534.021835
[2025-11-21 07:52:39] 2025-11-21 12:51:34,662 | INFO     | sum of deviations: 219775433922.48376
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | mean x: 1763720152.7745454
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | mean y: 3039918.669090909
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | intersect: -60098616859.27971
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | chi2: 2.254898139574032
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | current chi2=2.254898139574032 (change=-0.0037058110846508773 %)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | right removable region: 274
[2025-11-21 07:52:39] 2025-11-21 12:51:34,663 | INFO     | sum of square deviations: 7178720306.175491
[2025-11-21 07:52:39] 2025-11-21 12:51:34,664 | INFO     | sum of deviations: -39369301789.19302
[2025-11-21 07:52:39] 2025-11-21 12:51:34,664 | INFO     | mean x: 1763720762.7719297
[2025-11-21 07:52:39] 2025-11-21 12:51:34,664 | INFO     | mean y: 2994692.950877193
[2025-11-21 07:52:39] 2025-11-21 12:51:34,664 | INFO     | intersect: 9675534089.937988
[2025-11-21 07:52:39] 2025-11-21 12:51:34,665 | INFO     | chi2: 6.808829109257196
[2025-11-21 07:52:39] 2025-11-21 12:51:34,665 | INFO     | current chi2=6.808829109257196 (change=23.31600144636966 %)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,665 | INFO     | left removable region: 10
[2025-11-21 07:52:39] 2025-11-21 12:51:34,665 | INFO     | sum of square deviations: 5706088123.693153
[2025-11-21 07:52:39] 2025-11-21 12:51:34,666 | INFO     | sum of deviations: 130693185590.69316
[2025-11-21 07:52:39] 2025-11-21 12:51:34,666 | INFO     | mean x: 1763720427.284091
[2025-11-21 07:52:39] 2025-11-21 12:51:34,666 | INFO     | mean y: 3078169.617424242
[2025-11-21 07:52:39] 2025-11-21 12:51:34,666 | INFO     | intersect: -40393466036.563835
[2025-11-21 07:52:39] 2025-11-21 12:51:34,666 | INFO     | chi2: 0.0271463545650158
[2025-11-21 07:52:39] 2025-11-21 12:51:34,666 | INFO     | current memory leak: 22.90 B/s (using 264 data points, chi2=0.03)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | could have reported an average CPU frequency of 3799 MHz (13 samples)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | ..............................
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . Timing measurements:
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . get job = 0 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . initial setup = 2 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . payload setup = 8 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . stage-in = 0 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . payload execution = 17668 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . stage-out = 3 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | . log creation = 0 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,667 | INFO     | ..............................
[2025-11-21 07:52:39] 2025-11-21 12:51:34,747 | INFO     | 
[2025-11-21 07:52:39] 2025-11-21 12:51:34,747 | INFO     | job summary report
[2025-11-21 07:52:39] 2025-11-21 12:51:34,747 | INFO     | --------------------------------------------------
[2025-11-21 07:52:39] 2025-11-21 12:51:34,747 | INFO     | PanDA job id: 6893850467
[2025-11-21 07:52:39] 2025-11-21 12:51:34,747 | INFO     | task id: 47523449
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | errors: (none)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | pilot state: finished 
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | transexitcode: 0
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | exeerrorcode: 0
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | exeerrordiag: 
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | exitcode: 0
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | exitmsg: OK
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | cpuconsumptiontime: 131440 s
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | nevents: 1000
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | neventsw: 0
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | pid: 1924329
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | pgrp: 1924329
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | corecount: 9
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | event service: False
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | sizes: {0: 2298630, 1: 2298829, 6: 2299091, 11: 2299119, 17680: 2332523, 17685: 2341517, 17687: 2341701, 17715: 2341947}
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | --------------------------------------------------
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | 
[2025-11-21 07:52:39] 2025-11-21 12:51:34,748 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | job 6893850467 has completed (purged errors)
[2025-11-21 07:52:39] 2025-11-21 12:51:34,856 | INFO     | overall cleanup function is called
[2025-11-21 07:52:39] 2025-11-21 12:51:35,880 | INFO     | --- collectZombieJob: --- 10, [1924329]
[2025-11-21 07:52:39] 2025-11-21 12:51:35,880 | INFO     | zombie collector waiting for pid 1924329
[2025-11-21 07:52:39] 2025-11-21 12:51:35,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 07:52:39] 2025-11-21 12:51:35,880 | INFO     | collected zombie processes
[2025-11-21 07:52:39] 2025-11-21 12:51:35,880 | INFO     | will attempt to kill all subprocesses of pid=1924329
[2025-11-21 07:52:39] 2025-11-21 12:51:36,760 | INFO     | process IDs to be killed: [1924329] (in reverse order)
[2025-11-21 07:52:39] 2025-11-21 12:51:36,957 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 07:52:39] 2025-11-21 12:51:36,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 07:52:39] 2025-11-21 12:51:37,000 | INFO     | did not find any defunct processes belonging to 1924329
[2025-11-21 07:52:39] 2025-11-21 12:51:37,051 | INFO     | did not find any defunct processes belonging to 1924329
[2025-11-21 07:52:39] 2025-11-21 12:51:37,055 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 07:52:39] 2025-11-21 12:51:37,055 | INFO     | ready for new job
[2025-11-21 07:52:39] 2025-11-21 12:51:37,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 07:52:39] 2025-11-21 12:51:37,060 | INFO     | ***************************************
[2025-11-21 07:52:39] 2025-11-21 12:51:37,060 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 07:52:39] 2025-11-21 12:51:37,060 | INFO     | ***************************************
[2025-11-21 07:52:39] 2025-11-21 12:51:37,061 | INFO     | 
[2025-11-21 07:52:39] 2025-11-21 12:51:37,068 | INFO     | architecture information:
[2025-11-21 07:52:39] 2025-11-21 12:51:37,071 | INFO     | executing command: cat /etc/os-release
[2025-11-21 07:52:39] 2025-11-21 12:51:37,119 | INFO     | cat /etc/os-release:
[2025-11-21 07:52:39] NAME="CentOS Linux"
[2025-11-21 07:52:39] VERSION="7 (Core)"
[2025-11-21 07:52:39] ID="centos"
[2025-11-21 07:52:39] ID_LIKE="rhel fedora"
[2025-11-21 07:52:39] VERSION_ID="7"
[2025-11-21 07:52:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 07:52:39] ANSI_COLOR="0;31"
[2025-11-21 07:52:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 07:52:39] HOME_URL="https://www.centos.org/"
[2025-11-21 07:52:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 07:52:39] 
[2025-11-21 07:52:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 07:52:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 07:52:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 07:52:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 07:52:39] 
[2025-11-21 07:52:39] 2025-11-21 12:51:37,119 | INFO     | ***************************************
[2025-11-21 07:52:39] 2025-11-21 12:51:37,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-21 07:52:39] 2025-11-21 12:51:37,680 | INFO     | sufficient remaining disk space (151943905280 B)
[2025-11-21 07:52:39] 2025-11-21 12:51:37,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 07:52:39] 2025-11-21 12:51:37,681 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 07:52:39] 2025-11-21 12:51:37,681 | INFO     | update_server=False
[2025-11-21 07:52:39] 2025-11-21 12:51:37,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 07:52:39] 2025-11-21 12:51:37,834 | INFO     | all job control threads have been joined
[2025-11-21 07:52:39] 2025-11-21 12:51:37,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 07:52:39] 2025-11-21 12:51:38,102 | INFO     | all data control threads have been joined
[2025-11-21 07:52:39] 2025-11-21 12:51:38,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:52:39] 2025-11-21 12:51:38,217 | INFO     | aborting loop
[2025-11-21 07:52:39] 2025-11-21 12:51:38,687 | INFO     | [job] retrieve thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:38,765 | INFO     | [job] validate thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:38,839 | INFO     | [job] control thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,108 | INFO     | [data] control thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,187 | INFO     | all payload control threads have been joined
[2025-11-21 07:52:39] 2025-11-21 12:51:39,223 | INFO     | [job] job monitor thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,379 | INFO     | [payload] validate_post thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,749 | INFO     | [data] copytool_in thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:52:39] 2025-11-21 12:51:39,867 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,901 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:39,923 | INFO     | [data] copytool_out thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:40,106 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:40,192 | INFO     | [payload] control thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:40,205 | INFO     | [payload] failed_post thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:40,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 07:52:39] 2025-11-21 12:51:40,772 | INFO     | [job] queue monitor thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:51:44,330 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 07:52:39] 2025-11-21 12:52:07,996 | INFO     | PID=1907353 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 07:52:39] 2025-11-21 12:52:07,997 | INFO     | .. there are 37 such processes running
[2025-11-21 07:52:39] 2025-11-21 12:52:07,997 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 07:52:39] 2025-11-21 12:52:07,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 07:52:39] 2025-11-21 12:52:07,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 07:52:39] 2025-11-21 12:52:32,853 | INFO     | [monitor] cgroup control has ended
[2025-11-21 07:52:39] 2025-11-21 12:52:34,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140705051936576)>', '<ExcThread(monitor, started 140704261072640)>']
[2025-11-21 07:52:39] 2025-11-21 12:52:35,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 07:52:39] 2025-11-21 12:52:35,158 | INFO     | [monitor] control thread has ended
[2025-11-21 07:52:39] 2025-11-21 12:52:39,357 | INFO     | all workflow threads have been joined
[2025-11-21 07:52:39] 2025-11-21 12:52:39,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 07:52:39] 2025-11-21 12:52:39,357 | INFO     | traces error code: 0
[2025-11-21 07:52:39] 2025-11-21 12:52:39,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 07:52:39] 2025-11-21 12:52:39,450 [wrapper] ==== pilot stdout END ====
[2025-11-21 07:52:39] 2025-11-21 12:52:39,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 07:52:39] 2025-11-21 12:52:39,467 [wrapper] pilotpid: 1907353
[2025-11-21 07:52:39] 2025-11-21 12:52:39,474 [wrapper] Pilot exit status: 0
[2025-11-21 07:52:39] 2025-11-21 12:52:39,506 [wrapper] pandaids: 6893850467
[2025-11-21 07:52:39] 2025-11-21 12:52:39,686 [wrapper] cleanup supervisor_pilot  278340 1907354
[2025-11-21 07:52:39] 2025-11-21 12:52:39,694 [wrapper] Test setup, not cleaning
[2025-11-21 07:52:39] 2025-11-21 12:52:39,705 [wrapper] apfmon messages muted
[2025-11-21 07:52:39] 2025-11-21 12:52:39,709 [wrapper] ==== wrapper stdout END ====
[2025-11-21 07:52:39] 2025-11-21 12:52:39,714 [wrapper] ==== wrapper stderr END ====
[2025-11-21 07:52:39]  *** Error codes and diagnostics ***
[2025-11-21 07:52:39]     "exeErrorCode": 0,
[2025-11-21 07:52:39]     "exeErrorDiag": "",
[2025-11-21 07:52:39]     "pilotErrorCode": 0,
[2025-11-21 07:52:39]     "pilotErrorDiag": "",
[2025-11-21 07:52:39]  *** Listing of results directory ***
[2025-11-21 07:52:40] total 1295888
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:23 queuedata.json
[2025-11-21 07:52:40] -rwx------. 1 boincer umatlas     36292 Nov 20 06:23 runpilot2-wrapper.sh
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas       100 Nov 21 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 07:52:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 02:55 run_atlas
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas       105 Nov 21 02:55 job.xml
[2025-11-21 07:52:40] -rw-r--r--. 2 boincer umatlas 408376704 Nov 21 02:55 EVNT.47493127._000338.pool.root.1
[2025-11-21 07:52:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 02:55 start_atlas.sh
[2025-11-21 07:52:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 02:55 shared
[2025-11-21 07:52:40] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 02:55 input.tar.gz
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas         0 Nov 21 02:55 boinc_lockfile
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas      2783 Nov 21 02:55 pandaJob.out
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas        57 Nov 21 02:55 setup.sh.local
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas    989817 Nov 21 02:56 agis_schedconf.cvmfs.json
[2025-11-21 07:52:40] drwx------. 5 boincer umatlas      4096 Nov 21 02:56 pilot3
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas       533 Nov 21 07:40 boinc_task_state.xml
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas      7178 Nov 21 07:46 init_data.xml
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas 906413980 Nov 21 07:50 HITS.47523449._003371.pool.root.1
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas      1046 Nov 21 07:50 memory_monitor_summary.json
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas   1526164 Nov 21 07:51 agis_ddmendpoints.agis.ALL.json
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas   1711437 Nov 21 07:51 log.47523449._003371.job.log.tgz.1
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas        95 Nov 21 07:51 pilot_heartbeat.json
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas      8581 Nov 21 07:51 heartbeat.json
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 07:52 boinc_mmap_file
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas        29 Nov 21 07:52 wrapper_checkpoint.txt
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas      4825 Nov 21 07:52 pilotlog.txt
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas   2424805 Nov 21 07:52 log.47523449._003371.job.log.1
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas       353 Nov 21 07:52 output.list
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas       620 Nov 21 07:52 runtime_log
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas   4157440 Nov 21 07:52 result.tar.gz
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 07:52 runtime_log.err
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas       660 Nov 21 07:52 LhFNDmiwHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIXGKDmq53Kfm.diag
[2025-11-21 07:52:40] -rw-r--r--. 1 boincer umatlas     21337 Nov 21 07:52 stderr.txt
[2025-11-21 07:52:40] HITS file was successfully produced:
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas 906413980 Nov 21 07:50 shared/HITS.pool.root.1
[2025-11-21 07:52:40]  *** Contents of shared directory: ***
[2025-11-21 07:52:40] total 1288644
[2025-11-21 07:52:40] -rw-r--r--. 2 boincer umatlas 408376704 Nov 21 02:55 ATLAS.root_0
[2025-11-21 07:52:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 02:55 start_atlas.sh
[2025-11-21 07:52:40] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 02:55 input.tar.gz
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas 906413980 Nov 21 07:50 HITS.pool.root.1
[2025-11-21 07:52:40] -rw-------. 1 boincer umatlas   4157440 Nov 21 07:52 result.tar.gz
07:52:41 (1902938): run_atlas exited; CPU time 131678.333067
07:52:41 (1902938): called boinc_finish(0)

</stderr_txt>
]]>

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