Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:20:20 (674940): wrapper (7.7.26015): starting
23:20:20 (674940): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 23:20:20] Arguments: --nthreads 12
[2025-11-20 23:20:20] Threads: 12
[2025-11-20 23:20:20] Checking for CVMFS
[2025-11-20 23:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:20:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:20:21] 2.11.5.0 4038285 20782 305500 153113 2 157 44086960 45568001 15726 130560 0 214947939 99.822 118415691 16464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-20 23:20:21] CVMFS is ok
[2025-11-20 23:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:20:21] Further information can be found at the LHC@home message board.
[2025-11-20 23:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:20:21] Checking for apptainer binary...
[2025-11-20 23:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:20:21] Running /usr/bin/apptainer --version
[2025-11-20 23:20:21] apptainer version 1.4.1-1.el9
[2025-11-20 23:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:20:22] wns0061.triumf.lcg
[2025-11-20 23:20:22] apptainer works
[2025-11-20 23:20:22] Set ATHENA_PROC_NUMBER=12
[2025-11-20 23:20:22] Set ATHENA_CORE_NUMBER=12
[2025-11-20 23:20:22] Starting ATLAS job with PandaID=6894247014
[2025-11-20 23:20:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:26:51]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 23:26:51] 2025-11-21 07:25:52,053 | WARNING  | wrong length of table data, x=[1763709696.0, 1763709757.0, 1763709818.0], y=[2001.0, 746942.0, 705961.0] (must be same and length>=4)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,053 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | ..............................
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . Timing measurements:
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . get job = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . initial setup = 3 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . payload setup = 11 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . stage-in = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . payload execution = 142 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . stage-out = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . log creation = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | ..............................
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894247014/pilotlog.txt
[2025-11-20 23:26:51] 2025-11-21 07:25:52,065 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 23:26:51] - Log from pilotlog.txt -
[2025-11-20 23:26:51] 2025-11-21 07:25:52,051 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894247014/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | INFO     | extracted standard info from prmon json
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 23:26:51] 2025-11-21 07:25:52,053 | WARNING  | wrong length of table data, x=[1763709696.0, 1763709757.0, 1763709818.0], y=[2001.0, 746942.0, 705961.0] (must be same and length>=4)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,053 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | ..............................
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . Timing measurements:
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . get job = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . initial setup = 3 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . payload setup = 11 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . stage-in = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . payload execution = 142 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . stage-out = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . log creation = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | ..............................
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894247014/pilotlog.txt
[2025-11-20 23:26:51] 2025-11-21 07:25:52,066 | WARNING  | 
[2025-11-20 23:26:51] [begin log extracts]
[2025-11-20 23:26:51] - Log from pilotlog.txt -
[2025-11-20 23:26:51] 2025-11-21 07:25:52,051 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894247014/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | INFO     | extracted standard info from prmon json
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 23:26:51] 2025-11-21 07:25:52,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 23:26:51] 2025-11-21 07:25:52,053 | WARNING  | wrong length of table data, x=[1763709696.0, 1763709757.0, 1763709818.0], y=[2001.0, 746942.0, 705961.0] (must be same and length>=4)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,053 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | ..............................
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . Timing measurements:
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . get job = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . initial setup = 3 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . payload setup = 11 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . stage-in = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . payload execution = 142 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . stage-out = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | . log creation = 0 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | ..............................
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 23:26:51] 2025-11-21 07:25:52,054 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894247014/pilotlog.txt
[2025-11-20 23:26:51] [end log extracts]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,066 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,067 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | 
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | job summary report
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | --------------------------------------------------
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | PanDA job id: 6894247014
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | task id: 47533967
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 23:23:44,675 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | pilot state: failed 
[2025-11-20 23:26:51] 2025-11-21 07:25:52,186 | INFO     | transexitcode: 65
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | exeerrorcode: 65
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | exitcode: 65
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | cpuconsumptiontime: 44 s
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | nevents: 0
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | neventsw: 0
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | pid: 692796
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | pgrp: 692796
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | corecount: 12
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | event service: False
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | sizes: {0: 2298802, 1: 2298802, 12: 2299120, 22: 2299120, 157: 2324567, 158: 2328989, 277: 2329127}
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | --------------------------------------------------
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | 
[2025-11-20 23:26:51] 2025-11-21 07:25:52,187 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 23:26:51] 2025-11-21 07:25:52,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | job 6894247014 has completed (purged errors)
[2025-11-20 23:26:51] 2025-11-21 07:25:52,206 | INFO     | overall cleanup function is called
[2025-11-20 23:26:51] 2025-11-21 07:25:53,213 | INFO     | --- collectZombieJob: --- 10, [692796]
[2025-11-20 23:26:51] 2025-11-21 07:25:53,214 | INFO     | zombie collector waiting for pid 692796
[2025-11-20 23:26:51] 2025-11-21 07:25:53,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:26:51] 2025-11-21 07:25:53,214 | INFO     | collected zombie processes
[2025-11-20 23:26:51] 2025-11-21 07:25:53,214 | INFO     | will attempt to kill all subprocesses of pid=692796
[2025-11-20 23:26:51] 2025-11-21 07:25:53,420 | INFO     | process IDs to be killed: [692796] (in reverse order)
[2025-11-20 23:26:51] 2025-11-21 07:25:53,496 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:26:51] 2025-11-21 07:25:53,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:26:51] 2025-11-21 07:25:53,505 | INFO     | did not find any defunct processes belonging to 692796
[2025-11-20 23:26:51] 2025-11-21 07:25:53,512 | INFO     | did not find any defunct processes belonging to 692796
[2025-11-20 23:26:51] 2025-11-21 07:25:53,513 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:26:51] 2025-11-21 07:25:53,513 | INFO     | ready for new job
[2025-11-20 23:26:51] 2025-11-21 07:25:53,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:26:51] 2025-11-21 07:25:53,515 | INFO     | ***************************************
[2025-11-20 23:26:51] 2025-11-21 07:25:53,515 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:26:51] 2025-11-21 07:25:53,515 | INFO     | ***************************************
[2025-11-20 23:26:51] 2025-11-21 07:25:53,515 | INFO     | 
[2025-11-20 23:26:51] 2025-11-21 07:25:53,517 | INFO     | architecture information:
[2025-11-20 23:26:51] 2025-11-21 07:25:53,517 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:26:51] 2025-11-21 07:25:53,527 | INFO     | cat /etc/os-release:
[2025-11-20 23:26:51] NAME="CentOS Linux"
[2025-11-20 23:26:51] VERSION="7 (Core)"
[2025-11-20 23:26:51] ID="centos"
[2025-11-20 23:26:51] ID_LIKE="rhel fedora"
[2025-11-20 23:26:51] VERSION_ID="7"
[2025-11-20 23:26:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:26:51] ANSI_COLOR="0;31"
[2025-11-20 23:26:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:26:51] HOME_URL="https://www.centos.org/"
[2025-11-20 23:26:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:26:51] 
[2025-11-20 23:26:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:26:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:26:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:26:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:26:51] 
[2025-11-20 23:26:51] 2025-11-21 07:25:53,527 | INFO     | ***************************************
[2025-11-20 23:26:51] 2025-11-21 07:25:54,030 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 23:26:51] 2025-11-21 07:25:54,042 | INFO     | sufficient remaining disk space (2064827547648 B)
[2025-11-20 23:26:51] 2025-11-21 07:25:54,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:26:51] 2025-11-21 07:25:54,043 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:26:51] 2025-11-21 07:25:54,043 | INFO     | update_server=False
[2025-11-20 23:26:51] 2025-11-21 07:25:54,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:26:51] 2025-11-21 07:25:54,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:26:51] 2025-11-21 07:25:54,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:26:51] 2025-11-21 07:25:54,246 | INFO     | all payload control threads have been joined
[2025-11-20 23:26:51] 2025-11-21 07:25:54,538 | INFO     | all job control threads have been joined
[2025-11-20 23:26:51] 2025-11-21 07:25:54,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:26:51] 2025-11-21 07:25:54,839 | INFO     | aborting loop
[2025-11-20 23:26:51] 2025-11-21 07:25:55,043 | INFO     | all data control threads have been joined
[2025-11-20 23:26:51] 2025-11-21 07:25:55,048 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,048 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,098 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,251 | INFO     | [payload] control thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,326 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,535 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,544 | INFO     | [job] control thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,640 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,785 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:55,844 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:56,049 | INFO     | [data] control thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:56,049 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:56,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:26:51] 2025-11-21 07:25:56,317 | INFO     | [job] validate thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:56,416 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:25:56,461 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:26:00,181 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:26:51] 2025-11-21 07:26:24,414 | INFO     | PID=678853 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 23:26:51] 2025-11-21 07:26:24,414 | INFO     | .. there are 27 such processes running
[2025-11-20 23:26:51] 2025-11-21 07:26:24,414 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:26:51] 2025-11-21 07:26:24,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:26:51] 2025-11-21 07:26:24,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:26:51] 2025-11-21 07:26:45,158 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:26:51] 2025-11-21 07:26:46,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440282810176)>', '<ExcThread(monitor, started 140439499818752)>']
[2025-11-20 23:26:51] 2025-11-21 07:26:47,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:26:51] 2025-11-21 07:26:47,530 | INFO     | [monitor] control thread has ended
[2025-11-20 23:26:51] 2025-11-21 07:26:51,701 | INFO     | all workflow threads have been joined
[2025-11-20 23:26:51] 2025-11-21 07:26:51,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:26:51] 2025-11-21 07:26:51,702 | INFO     | traces error code: 0
[2025-11-20 23:26:51] 2025-11-21 07:26:51,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:26:51] 2025-11-21 07:26:51,797 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:26:51] 2025-11-21 07:26:51,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:26:51] 2025-11-21 07:26:51,801 [wrapper] pilotpid: 678853
[2025-11-20 23:26:51] 2025-11-21 07:26:51,802 [wrapper] Pilot exit status: 0
[2025-11-20 23:26:51] 2025-11-21 07:26:51,809 [wrapper] pandaids: 6894247014
[2025-11-20 23:26:51] 2025-11-21 07:26:51,854 [wrapper] cleanup supervisor_pilot  678859 678854
[2025-11-20 23:26:51] 2025-11-21 07:26:51,856 [wrapper] Test setup, not cleaning
[2025-11-20 23:26:51] 2025-11-21 07:26:51,858 [wrapper] apfmon messages muted
[2025-11-20 23:26:51] 2025-11-21 07:26:51,859 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:26:51] 2025-11-21 07:26:51,861 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:26:51]  *** Error codes and diagnostics ***
[2025-11-20 23:26:51]     "exeErrorCode": 65,
[2025-11-20 23:26:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 23:26:51]     "pilotErrorCode": 1305,
[2025-11-20 23:26:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 23:26:51]  *** Listing of results directory ***
[2025-11-20 23:26:51] total 405732
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-20 23:26:51] -rwx------. 1 boinc boinc     36292 Nov 20 17:44 runpilot2-wrapper.sh
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc      5112 Nov 20 17:44 queuedata.json
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc       100 Nov 20 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:26:51] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 23:20 run_atlas
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc       105 Nov 20 23:20 job.xml
[2025-11-20 23:26:51] -rw-r--r--. 2 boinc boinc 411239304 Nov 20 23:20 EVNT.47493127._002096.pool.root.1
[2025-11-20 23:26:51] -rw-r--r--. 2 boinc boinc     15847 Nov 20 23:20 start_atlas.sh
[2025-11-20 23:26:51] drwxrwx--x. 2 boinc boinc      4096 Nov 20 23:20 shared
[2025-11-20 23:26:51] -rw-r--r--. 2 boinc boinc    590100 Nov 20 23:20 input.tar.gz
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc      6595 Nov 20 23:20 init_data.xml
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc         0 Nov 20 23:20 boinc_lockfile
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc      2785 Nov 20 23:20 pandaJob.out
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc    989817 Nov 20 23:20 agis_schedconf.cvmfs.json
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc   1526164 Nov 20 23:20 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:26:51] drwx------. 5 boinc boinc      4096 Nov 20 23:20 pilot3
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc       525 Nov 20 23:23 boinc_task_state.xml
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc       994 Nov 20 23:23 memory_monitor_summary.json
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc     50100 Nov 20 23:23 log.47533967._000679.job.log.tgz.1
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc        95 Nov 20 23:25 pilot_heartbeat.json
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc     10339 Nov 20 23:25 heartbeat.json
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc      8192 Nov 20 23:26 boinc_mmap_file
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc        23 Nov 20 23:26 wrapper_checkpoint.txt
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc      4822 Nov 20 23:26 pilotlog.txt
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc    105127 Nov 20 23:26 log.47533967._000679.job.log.1
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc       186 Nov 20 23:26 output.list
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc       620 Nov 20 23:26 runtime_log
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc    174080 Nov 20 23:26 result.tar.gz
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc      8636 Nov 20 23:26 runtime_log.err
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc       647 Nov 20 23:26 MW2LDmSNVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbpIKDmRzSkSn.diag
[2025-11-20 23:26:51] -rw-r--r--. 1 boinc boinc     22535 Nov 20 23:26 stderr.txt
[2025-11-20 23:26:51] No HITS result produced
[2025-11-20 23:26:51]  *** Contents of shared directory: ***
[2025-11-20 23:26:51] total 402376
[2025-11-20 23:26:51] -rw-r--r--. 2 boinc boinc 411239304 Nov 20 23:20 ATLAS.root_0
[2025-11-20 23:26:51] -rw-r--r--. 2 boinc boinc     15847 Nov 20 23:20 start_atlas.sh
[2025-11-20 23:26:51] -rw-r--r--. 2 boinc boinc    590100 Nov 20 23:20 input.tar.gz
[2025-11-20 23:26:51] -rw-------. 1 boinc boinc    174080 Nov 20 23:26 result.tar.gz
23:26:53 (674940): run_atlas exited; CPU time 45.999585
23:26:53 (674940): called boinc_finish(0)

</stderr_txt>
]]>

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