Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 12:55:52 (31476): vboxwrapper version 26210
2025-11-25 12:55:52 (31476): BOINC client version: 8.2.4
2025-11-25 12:55:53 (31476): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-11-25 12:55:53 (31476): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 12:55:53 (31476): Create VM. (boinc_ab9d8dfcea787fc9, slot#2)
2025-11-25 12:55:54 (31476): Setting Memory Size for VM. (4200MB)
2025-11-25 12:55:54 (31476): Setting CPU Count for VM. (2)
2025-11-25 12:55:54 (31476): Setting Chipset Options for VM.
2025-11-25 12:55:55 (31476): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 12:55:55 (31476): Setting Boot Options for VM.
2025-11-25 12:55:56 (31476): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 12:55:56 (31476): Enabling VM Network Access.
2025-11-25 12:55:56 (31476): Disabling USB Support for VM.
2025-11-25 12:55:56 (31476): Disabling COM Port Support for VM.
2025-11-25 12:55:57 (31476): Disabling LPT Port Support for VM.
2025-11-25 12:55:57 (31476): Disabling Audio Support for VM.
2025-11-25 12:55:57 (31476): Disabling Clipboard Support for VM.
2025-11-25 12:55:57 (31476): Disabling Drag and Drop Support for VM.
2025-11-25 12:55:58 (31476): Adding storage controller(s) to VM.
2025-11-25 12:55:58 (31476): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 12:55:58 (31476): Adding VirtualBox Guest Additions to VM.
2025-11-25 12:55:59 (31476): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 12:55:59 (31476): forwarding host port 57453 to guest port 80
2025-11-25 12:55:59 (31476): Enabling remote desktop for VM.
2025-11-25 12:55:59 (31476): Required extension pack not installed, remote desktop not enabled.
2025-11-25 12:55:59 (31476): Enabling shared directory for VM.
2025-11-25 12:56:00 (31476): Starting VM using VBoxManage interface. (boinc_ab9d8dfcea787fc9, slot#2)
2025-11-25 12:56:06 (31476): Successfully started VM. (PID = '35476')
2025-11-25 12:56:06 (31476): Reporting VM Process ID to BOINC.
2025-11-25 12:56:06 (31476): Guest Log: BIOS: VirtualBox 7.0.6
2025-11-25 12:56:06 (31476): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 12:56:06 (31476): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 12:56:06 (31476): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 12:56:06 (31476): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 12:56:06 (31476): Detected: Web Application Enabled (http://localhost:57453)
2025-11-25 12:56:06 (31476): Preference change detected
2025-11-25 12:56:06 (31476): Setting CPU throttle for VM. (100%)
2025-11-25 12:56:06 (31476): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 12:56:08 (31476): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 12:56:08 (31476): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 12:56:10 (31476): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 12:56:10 (31476): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 12:56:10 (31476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 12:56:16 (31476): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 12:56:16 (31476): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 12:56:20 (31476): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000103 main     Log opened 2025-11-25T12:56:18.512956000Z
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000180 main     OS Product: Linux
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000273 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000310 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000311 main     Process ID: 1262
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.000311 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 12:56:20 (31476): Guest Log: 00:00:00.001685 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 12:56:20 (31476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 12:56:20 (31476): Guest Log: [INFO] Mounting shared directory
2025-11-25 12:56:20 (31476): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 12:56:24 (31476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 12:56:24 (31476): Guest Log: [INFO] Detected branch: prod
2025-11-25 12:56:24 (31476): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 12:56:24 (31476): Guest Log: Copying input files
2025-11-25 12:56:25 (31476): Guest Log: Copied input files into RunAtlas.
2025-11-25 12:56:26 (31476): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 12:56:26 (31476): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 12:56:26 (31476): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 12:56:26 (31476): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 12:56:30 (31476): Guest Log: 00:00:10.006236 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 596 752 000ns (GuestNow=1 764 093 390 115 409 000 ns GuestLast=1 764 075 378 518 657 000 ns fSetTimeLastLoop=true )
2025-11-25 12:56:34 (31476): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 12:56:34 (31476): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 12:56:34 (31476): Guest Log: 2.6.3.0 1539 0 32100 153292 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 12:56:35 (31476): Guest Log: copied the webapp to /var/www
2025-11-25 12:56:35 (31476): Guest Log: ATHENA_PROC_NUMBER=2
2025-11-25 12:56:35 (31476): Guest Log: ATHENA_CORE_NUMBER=2
2025-11-25 12:56:35 (31476): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 12:56:35 (31476): Guest Log:  *** Starting ATLAS job. (PandaID=6886165901 taskID=47450870) ***
2025-11-25 14:36:11 (31476): Status Report: Elapsed Time: '6000.000000'
2025-11-25 14:36:11 (31476): Status Report: CPU Time: '11437.250000'
2025-11-25 16:16:16 (31476): Status Report: Elapsed Time: '12000.000000'
2025-11-25 16:16:16 (31476): Status Report: CPU Time: '23383.296875'
2025-11-25 17:56:20 (31476): Status Report: Elapsed Time: '18000.000000'
2025-11-25 17:56:20 (31476): Status Report: CPU Time: '35333.218750'
2025-11-25 19:36:25 (31476): Status Report: Elapsed Time: '24000.000000'
2025-11-25 19:36:25 (31476): Status Report: CPU Time: '47284.890625'
2025-11-25 21:16:30 (31476): Status Report: Elapsed Time: '30000.000000'
2025-11-25 21:16:30 (31476): Status Report: CPU Time: '59232.937500'
2025-11-25 22:56:35 (31476): Status Report: Elapsed Time: '36000.000000'
2025-11-25 22:56:35 (31476): Status Report: CPU Time: '71186.828125'
2025-11-26 00:36:40 (31476): Status Report: Elapsed Time: '42000.000000'
2025-11-26 00:36:40 (31476): Status Report: CPU Time: '83143.187500'
2025-11-26 02:16:44 (31476): Status Report: Elapsed Time: '48000.000000'
2025-11-26 02:16:44 (31476): Status Report: CPU Time: '95096.250000'
2025-11-26 03:56:50 (31476): Status Report: Elapsed Time: '54000.000000'
2025-11-26 03:56:50 (31476): Status Report: CPU Time: '107052.031250'
2025-11-26 05:36:54 (31476): Status Report: Elapsed Time: '60000.000000'
2025-11-26 05:36:54 (31476): Status Report: CPU Time: '119002.937500'
2025-11-26 06:34:43 (31476): Guest Log:  *** Job finished ***
2025-11-26 06:34:43 (31476): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:06,113 | INFO     | [payload] validate_post thread has finished
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:08,821 | INFO     | [data] queue_monitor thread has finished
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:36,055 | INFO     | [monitor] cgroup control has ended
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:37,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519084042048)>', '<ExcThread(monitor, started 140518361126656)>']
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:37,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:37,818 | INFO     | [monitor] control thread has ended
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,495 | INFO     | all workflow threads have been joined
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,495 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,495 | INFO     | traces error code: 0
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,559 [wrapper] ==== pilot stdout END ====
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,562 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,565 [wrapper] pilotpid: 5915
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,567 [wrapper] Pilot exit status: 0
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,580 [wrapper] pandaids: 6886165901
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,598 [wrapper] cleanup supervisor_pilot  3030 5916
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,600 [wrapper] Test setup, not cleaning
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,604 [wrapper] apfmon messages muted
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,607 [wrapper] ==== wrapper stdout END ====
2025-11-26 06:34:43 (31476): Guest Log: 2025-11-26 11:34:42,610 [wrapper] ==== wrapper stderr END ====
2025-11-26 06:34:43 (31476): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 06:34:43 (31476): Guest Log:     "exeErrorCode": 0,
2025-11-26 06:34:43 (31476): Guest Log:     "exeErrorDiag": "",
2025-11-26 06:34:43 (31476): Guest Log:     "pilotErrorCode": 0,
2025-11-26 06:34:43 (31476): Guest Log:     "pilotErrorDiag": "",
2025-11-26 06:34:43 (31476): Guest Log:  *** Listing of results directory ***
2025-11-26 06:34:43 (31476): Guest Log: total 576072
2025-11-26 06:34:43 (31476): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 14 14:24 pilot3.tar.gz
2025-11-26 06:34:43 (31476): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 14 14:29 queuedata.json
2025-11-26 06:34:43 (31476): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 14 14:31 runpilot2-wrapper.sh
2025-11-26 06:34:43 (31476): Guest Log: -rwxr-xr-x. 1 atlas atlas      8833 Nov 25 17:56 init_data.xml
2025-11-26 06:34:43 (31476): Guest Log: -rwxr-xr-x. 1 atlas atlas    590123 Nov 25 17:56 input.tar.gz
2025-11-26 06:34:43 (31476): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 25 17:56 start_atlas.sh
2025-11-26 06:34:43 (31476): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 17:56 EVNT.14545720._000081.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 06:34:43 (31476): Guest Log: -rw-r--r--. 1 atlas atlas      2928 Nov 25 17:56 pandaJob.out
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas    991543 Nov 25 17:57 agis_schedconf.cvmfs.json
2025-11-26 06:34:43 (31476): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 17:57 pilot3
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas 565655122 Nov 26 11:33 HITS.47450870._000709.pool.root.1
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 11:33 pilot_heartbeat.json
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas      1034 Nov 26 11:33 memory_monitor_summary.json
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 11:33 agis_ddmendpoints.agis.ALL.json
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas   1515055 Nov 26 11:33 log.47450870._000709.job.log.tgz.1
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas     27795 Nov 26 11:34 heartbeat.json
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 26 11:34 pilotlog.txt
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas   8666428 Nov 26 11:34 log.47450870._000709.job.log.1
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 11:34 output.list
2025-11-26 06:34:43 (31476): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 11:34 runtime_log
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas  10219520 Nov 26 11:34 result.tar.gz
2025-11-26 06:34:43 (31476): Guest Log: -rw-r--r--. 1 atlas atlas      8655 Nov 26 11:34 runtime_log.err
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas       667 Nov 26 11:34 0TtNDmr09d8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWlqMDmm1wHHn.diag
2025-11-26 06:34:43 (31476): Guest Log: Looking for outputfile HITS.47450870._000709.pool.root.1
2025-11-26 06:34:43 (31476): Guest Log: HITS file was successfully produced
2025-11-26 06:34:43 (31476): Guest Log: -rw-------. 1 atlas atlas 565655122 Nov 26 11:33 /home/atlas/RunAtlas/HITS.47450870._000709.pool.root.1
2025-11-26 06:34:45 (31476): Guest Log: Successfully finished the ATLAS job!
2025-11-26 06:34:45 (31476): Guest Log: Copying the results back to the shared directory!
2025-11-26 06:34:45 (31476): Guest Log:  *** Contents of shared directory: ***
2025-11-26 06:34:45 (31476): Guest Log: total 935608
2025-11-26 06:34:45 (31476): Guest Log: -rwxrwxrwx. 1 root root 381562050 Nov 25 17:55 ATLAS.root_0
2025-11-26 06:34:45 (31476): Guest Log: -rwxrwxrwx. 1 root root 565655122 Nov 26 11:34 HITS.pool.root.1
2025-11-26 06:34:45 (31476): Guest Log: -rwxrwxrwx. 1 root root      8833 Nov 25 17:55 init_data.xml
2025-11-26 06:34:45 (31476): Guest Log: -rwxrwxrwx. 1 root root    590123 Nov 21 07:43 input.tar.gz
2025-11-26 06:34:45 (31476): Guest Log: -rwxrwxrwx. 1 root root  10219520 Nov 26 11:34 result.tar.gz
2025-11-26 06:34:45 (31476): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 21 07:43 start_atlas.sh
2025-11-26 06:34:45 (31476): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 06:34:45 (31476): VM Completion File Detected.
2025-11-26 06:34:45 (31476): Powering off VM.
2025-11-26 06:34:46 (31476): Successfully stopped VM.
2025-11-26 06:34:46 (31476): Deregistering VM. (boinc_ab9d8dfcea787fc9, slot#2)
2025-11-26 06:34:46 (31476): Removing network bandwidth throttle group from VM.
2025-11-26 06:34:46 (31476): Removing VM from VirtualBox.
2025-11-26 06:34:51 (31476): called boinc_finish(0)

</stderr_txt>
]]>

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