Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:00:38 (2417223): wrapper (7.7.26015): starting
03:00:38 (2417223): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 03:00:38] Arguments: --nthreads 3
[2025-11-27 03:00:38] Threads: 3
[2025-11-27 03:00:38] Checking for CVMFS
[2025-11-27 03:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:00:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:00:39] 2.12.7.0 42853 12635 66492 153342 3 81 2798171 4096000 839 130560 31 7128637 99.910 862799 516 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-11-27 03:00:39] CVMFS is ok
[2025-11-27 03:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:00:39] Checking for apptainer binary...
[2025-11-27 03:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:00:39] Running /usr/bin/apptainer --version
[2025-11-27 03:00:39] apptainer version 1.4.2
[2025-11-27 03:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:00:39] TS-P320
[2025-11-27 03:00:39] apptainer works
[2025-11-27 03:00:39] Set ATHENA_PROC_NUMBER=3
[2025-11-27 03:00:39] Set ATHENA_CORE_NUMBER=3
[2025-11-27 03:00:39] Starting ATLAS job with PandaID=6893880748
[2025-11-27 03:00:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:21:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:21:06] 2025-11-27 15:20:39,714 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 16:21:06] 2025-11-27 15:20:40,466 | INFO     | monitor loop #3639: job 0:6893880748 is in state 'finished'
[2025-11-27 16:21:06] 2025-11-27 15:20:40,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,319 | INFO     | time since job start (47997s) is within the limit (172800.0s)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,567 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 16:21:06] 2025-11-27 15:20:41,569 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 4000.1491250000004
[2025-11-27 16:21:06] 2025-11-27 15:20:41,570 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6893880748/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,570 | INFO     | extracted standard info from prmon json
[2025-11-27 16:21:06] 2025-11-27 15:20:41,570 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:21:06] 2025-11-27 15:20:41,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:21:06] 2025-11-27 15:20:41,583 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:21:06] 2025-11-27 15:20:41,583 | INFO     | sum of square deviations: 151147831178.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,589 | INFO     | sum of deviations: 450122356585.9999
[2025-11-27 16:21:06] 2025-11-27 15:20:41,589 | INFO     | mean x: 1764232836.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,589 | INFO     | mean y: 2196275.500635324
[2025-11-27 16:21:06] 2025-11-27 15:20:41,589 | INFO     | intersect: -5251737145.294015
[2025-11-27 16:21:06] 2025-11-27 15:20:41,589 | INFO     | chi2: 2.1506233371241272
[2025-11-27 16:21:06] 2025-11-27 15:20:41,590 | INFO     | sum of square deviations: 148285256575.5
[2025-11-27 16:21:06] 2025-11-27 15:20:41,595 | INFO     | sum of deviations: 521070485008.5004
[2025-11-27 16:21:06] 2025-11-27 15:20:41,595 | INFO     | mean x: 1764232683.5
[2025-11-27 16:21:06] 2025-11-27 15:20:41,595 | INFO     | mean y: 2200042.1547314576
[2025-11-27 16:21:06] 2025-11-27 15:20:41,596 | INFO     | intersect: -6197267128.683884
[2025-11-27 16:21:06] 2025-11-27 15:20:41,596 | INFO     | chi2: 1.3692335506522295
[2025-11-27 16:21:06] 2025-11-27 15:20:41,596 | INFO     | current chi2=1.3692335506522295 (change=36.33317712978943 %)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,596 | INFO     | sum of square deviations: 145459054748.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | sum of deviations: 516188115189.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | mean x: 1764232531.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | mean y: 2199778.574002574
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | intersect: -6258502702.338623
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | chi2: 1.367888675074385
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | current chi2=1.367888675074385 (change=0.09822105054348364 %)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,602 | INFO     | right removable region: 776
[2025-11-27 16:21:06] 2025-11-27 15:20:41,603 | INFO     | sum of square deviations: 148285256575.5
[2025-11-27 16:21:06] 2025-11-27 15:20:41,608 | INFO     | sum of deviations: 367269574608.50006
[2025-11-27 16:21:06] 2025-11-27 15:20:41,609 | INFO     | mean x: 1764232988.5
[2025-11-27 16:21:06] 2025-11-27 15:20:41,609 | INFO     | mean y: 2200672.428388747
[2025-11-27 16:21:06] 2025-11-27 15:20:41,609 | INFO     | intersect: -4367411750.009388
[2025-11-27 16:21:06] 2025-11-27 15:20:41,609 | INFO     | chi2: 0.9544978675461672
[2025-11-27 16:21:06] 2025-11-27 15:20:41,609 | INFO     | current chi2=0.9544978675461672 (change=55.61761787526457 %)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,609 | INFO     | sum of square deviations: 145459054748.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,615 | INFO     | sum of deviations: 367253543839.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,615 | INFO     | mean x: 1764233141.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,615 | INFO     | mean y: 2200673.0025740024
[2025-11-27 16:21:06] 2025-11-27 15:20:41,615 | INFO     | intersect: -4452117240.123895
[2025-11-27 16:21:06] 2025-11-27 15:20:41,615 | INFO     | chi2: 0.9499680840924607
[2025-11-27 16:21:06] 2025-11-27 15:20:41,616 | INFO     | current chi2=0.9499680840924607 (change=0.47457240164943315 %)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,616 | INFO     | left removable region: 20
[2025-11-27 16:21:06] 2025-11-27 15:20:41,616 | INFO     | sum of square deviations: 133980949305.0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,621 | INFO     | sum of deviations: 413635670552.00006
[2025-11-27 16:21:06] 2025-11-27 15:20:41,621 | INFO     | mean x: 1764233110.5
[2025-11-27 16:21:06] 2025-11-27 15:20:41,621 | INFO     | mean y: 2205302.0793650793
[2025-11-27 16:21:06] 2025-11-27 15:20:41,621 | INFO     | intersect: -5444462671.667221
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | chi2: 0.13801531499845784
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | current memory leak: 3.09 B/s (using 756 data points, chi2=0.14)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | could have reported an average CPU frequency of 4000 MHz (30 samples)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | ..............................
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . Timing measurements:
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . get job = 0 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . initial setup = 1 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . payload setup = 2 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . stage-in = 0 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . payload execution = 47971 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . stage-out = 1 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | . log creation = 0 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,622 | INFO     | ..............................
[2025-11-27 16:21:06] 2025-11-27 15:20:41,656 | INFO     | 
[2025-11-27 16:21:06] 2025-11-27 15:20:41,656 | INFO     | job summary report
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | --------------------------------------------------
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | PanDA job id: 6893880748
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | task id: 47523449
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | errors: (none)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | pilot state: finished 
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | transexitcode: 0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | exeerrorcode: 0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | exeerrordiag: 
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | exitcode: 0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | exitmsg: OK
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | cpuconsumptiontime: 143533 s
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | nevents: 1000
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | neventsw: 0
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | pid: 2427355
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | pgrp: 2427355
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | corecount: 3
[2025-11-27 16:21:06] 2025-11-27 15:20:41,657 | INFO     | event service: False
[2025-11-27 16:21:06] 2025-11-27 15:20:41,658 | INFO     | sizes: {0: 2284264, 2: 2284526, 11: 2284554, 47977: 2332634, 47978: 2332633, 47980: 2341683, 47983: 2341867, 47985: 2342113}
[2025-11-27 16:21:06] 2025-11-27 15:20:41,658 | INFO     | --------------------------------------------------
[2025-11-27 16:21:06] 2025-11-27 15:20:41,658 | INFO     | 
[2025-11-27 16:21:06] 2025-11-27 15:20:41,658 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | job 6893880748 has completed (purged errors)
[2025-11-27 16:21:06] 2025-11-27 15:20:41,668 | INFO     | overall cleanup function is called
[2025-11-27 16:21:06] 2025-11-27 15:20:42,676 | INFO     | --- collectZombieJob: --- 10, [2427355]
[2025-11-27 16:21:06] 2025-11-27 15:20:42,676 | INFO     | zombie collector waiting for pid 2427355
[2025-11-27 16:21:06] 2025-11-27 15:20:42,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:21:06] 2025-11-27 15:20:42,676 | INFO     | collected zombie processes
[2025-11-27 16:21:06] 2025-11-27 15:20:42,676 | INFO     | will attempt to kill all subprocesses of pid=2427355
[2025-11-27 16:21:06] 2025-11-27 15:20:42,718 | INFO     | process IDs to be killed: [2427355] (in reverse order)
[2025-11-27 16:21:06] 2025-11-27 15:20:42,738 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:21:06] 2025-11-27 15:20:42,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:21:06] 2025-11-27 15:20:42,740 | INFO     | did not find any defunct processes belonging to 2427355
[2025-11-27 16:21:06] 2025-11-27 15:20:42,741 | INFO     | did not find any defunct processes belonging to 2427355
[2025-11-27 16:21:06] 2025-11-27 15:20:42,742 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:21:06] 2025-11-27 15:20:42,742 | INFO     | ready for new job
[2025-11-27 16:21:06] 2025-11-27 15:20:42,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:21:06] 2025-11-27 15:20:42,744 | INFO     | ***************************************
[2025-11-27 16:21:06] 2025-11-27 15:20:42,744 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:21:06] 2025-11-27 15:20:42,744 | INFO     | ***************************************
[2025-11-27 16:21:06] 2025-11-27 15:20:42,744 | INFO     | 
[2025-11-27 16:21:06] 2025-11-27 15:20:42,744 | INFO     | architecture information:
[2025-11-27 16:21:06] 2025-11-27 15:20:42,745 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:21:06] 2025-11-27 15:20:42,751 | INFO     | cat /etc/os-release:
[2025-11-27 16:21:06] NAME="CentOS Linux"
[2025-11-27 16:21:06] VERSION="7 (Core)"
[2025-11-27 16:21:06] ID="centos"
[2025-11-27 16:21:06] ID_LIKE="rhel fedora"
[2025-11-27 16:21:06] VERSION_ID="7"
[2025-11-27 16:21:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:21:06] ANSI_COLOR="0;31"
[2025-11-27 16:21:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:21:06] HOME_URL="https://www.centos.org/"
[2025-11-27 16:21:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:21:06] 
[2025-11-27 16:21:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:21:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:21:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:21:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:21:06] 
[2025-11-27 16:21:06] 2025-11-27 15:20:42,751 | INFO     | ***************************************
[2025-11-27 16:21:06] 2025-11-27 15:20:43,254 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-27 16:21:06] 2025-11-27 15:20:43,262 | INFO     | sufficient remaining disk space (192209223680 B)
[2025-11-27 16:21:06] 2025-11-27 15:20:43,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | INFO     | update_server=False
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:21:06] 2025-11-27 15:20:43,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:21:06] 2025-11-27 15:20:43,569 | INFO     | all payload control threads have been joined
[2025-11-27 16:21:06] 2025-11-27 15:20:43,623 | INFO     | all data control threads have been joined
[2025-11-27 16:21:06] 2025-11-27 15:20:43,932 | INFO     | all job control threads have been joined
[2025-11-27 16:21:06] 2025-11-27 15:20:43,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:21:06] 2025-11-27 15:20:43,973 | INFO     | aborting loop
[2025-11-27 16:21:06] 2025-11-27 15:20:44,266 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,268 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,403 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,480 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,573 | INFO     | [payload] control thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,628 | INFO     | [data] control thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,679 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,933 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,936 | INFO     | [job] control thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:44,978 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:45,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:45,139 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:45,269 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:45,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:21:06] 2025-11-27 15:20:45,706 | INFO     | [job] validate thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:45,743 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:20:49,707 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:21:06] 2025-11-27 15:21:01,560 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:21:06] 2025-11-27 15:21:01,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755047393088)>', '<ExcThread(monitor, started 139754335102720)>']
[2025-11-27 16:21:06] 2025-11-27 15:21:02,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:21:06] 2025-11-27 15:21:02,351 | INFO     | [monitor] control thread has ended
[2025-11-27 16:21:06] 2025-11-27 15:21:06,682 | INFO     | all workflow threads have been joined
[2025-11-27 16:21:06] 2025-11-27 15:21:06,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:21:06] 2025-11-27 15:21:06,683 | INFO     | traces error code: 0
[2025-11-27 16:21:06] 2025-11-27 15:21:06,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:21:06] 2025-11-27 15:21:06,738 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:21:06] 2025-11-27 15:21:06,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:21:06] 2025-11-27 15:21:06,741 [wrapper] pilotpid: 2420930
[2025-11-27 16:21:06] 2025-11-27 15:21:06,742 [wrapper] Pilot exit status: 0
[2025-11-27 16:21:06] 2025-11-27 15:21:06,746 [wrapper] pandaids: 6893880748
[2025-11-27 16:21:06] 2025-11-27 15:21:06,758 [wrapper] cleanup supervisor_pilot 2590989 2420931
[2025-11-27 16:21:06] 2025-11-27 15:21:06,759 [wrapper] Test setup, not cleaning
[2025-11-27 16:21:06] 2025-11-27 15:21:06,761 [wrapper] apfmon messages muted
[2025-11-27 16:21:06] 2025-11-27 15:21:06,762 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:21:06] 2025-11-27 15:21:06,763 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:21:06]  *** Error codes and diagnostics ***
[2025-11-27 16:21:06]     "exeErrorCode": 0,
[2025-11-27 16:21:06]     "exeErrorDiag": "",
[2025-11-27 16:21:06]     "pilotErrorCode": 0,
[2025-11-27 16:21:06]     "pilotErrorDiag": "",
[2025-11-27 16:21:06]  *** Listing of results directory ***
[2025-11-27 16:21:06] insgesamt 1318480
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc    576529 20. Nov 20:10 pilot3.tar.gz
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc      5112 20. Nov 20:36 queuedata.json
[2025-11-27 16:21:06] -rwx------ 1 boinc boinc     36292 20. Nov 20:36 runpilot2-wrapper.sh
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc       100 27. Nov 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:21:06] -rwxr-xr-x 1 boinc boinc      7986 27. Nov 03:00 run_atlas
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc       105 27. Nov 03:00 job.xml
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc      9829 27. Nov 03:00 init_data.xml
[2025-11-27 16:21:06] -rw-r--r-- 2 boinc boinc 407604721 27. Nov 03:00 EVNT.47493127._000839.pool.root.1
[2025-11-27 16:21:06] drwxrwx--x 2 boinc boinc      4096 27. Nov 03:00 shared
[2025-11-27 16:21:06] -rw-r--r-- 2 boinc boinc    590101 27. Nov 03:00 input.tar.gz
[2025-11-27 16:21:06] -rw-r--r-- 2 boinc boinc     15847 27. Nov 03:00 start_atlas.sh
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc         0 27. Nov 03:00 boinc_lockfile
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc      2785 27. Nov 03:00 pandaJob.out
[2025-11-27 16:21:06] -rw------- 1 boinc boinc        52 27. Nov 03:00 setup.sh.local
[2025-11-27 16:21:06] -rw------- 1 boinc boinc    991530 27. Nov 03:00 agis_schedconf.cvmfs.json
[2025-11-27 16:21:06] drwx------ 5 boinc boinc      4096 27. Nov 03:00 pilot3
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc       532 27. Nov 16:17 boinc_task_state.xml
[2025-11-27 16:21:06] -rw------- 1 boinc boinc        95 27. Nov 16:20 pilot_heartbeat.json
[2025-11-27 16:21:06] -rw------- 1 boinc boinc 922080763 27. Nov 16:20 HITS.47523449._008383.pool.root.1
[2025-11-27 16:21:06] -rw------- 1 boinc boinc      1024 27. Nov 16:20 memory_monitor_summary.json
[2025-11-27 16:21:06] -rw------- 1 boinc boinc   1516240 27. Nov 16:20 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:21:06] -rw------- 1 boinc boinc   1406782 27. Nov 16:20 log.47523449._008383.job.log.tgz.1
[2025-11-27 16:21:06] -rw------- 1 boinc boinc      8564 27. Nov 16:20 heartbeat.json
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc        29 27. Nov 16:20 wrapper_checkpoint.txt
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc      8192 27. Nov 16:20 boinc_mmap_file
[2025-11-27 16:21:06] -rw------- 1 boinc boinc      4553 27. Nov 16:21 pilotlog.txt
[2025-11-27 16:21:06] -rw------- 1 boinc boinc   6851586 27. Nov 16:21 log.47523449._008383.job.log.1
[2025-11-27 16:21:06] -rw------- 1 boinc boinc       353 27. Nov 16:21 output.list
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc       620 27. Nov 16:21 runtime_log
[2025-11-27 16:21:06] -rw------- 1 boinc boinc   8273920 27. Nov 16:21 result.tar.gz
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc      9275 27. Nov 16:21 runtime_log.err
[2025-11-27 16:21:06] -rw------- 1 boinc boinc       651 27. Nov 16:21 7BLKDmldPg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb1GKDmqdG4Wn.diag
[2025-11-27 16:21:06] -rw-r--r-- 1 boinc boinc     21000 27. Nov 16:21 stderr.txt
[2025-11-27 16:21:06] HITS file was successfully produced:
[2025-11-27 16:21:06] -rw------- 1 boinc boinc 922080763 27. Nov 16:20 shared/HITS.pool.root.1
[2025-11-27 16:21:06]  *** Contents of shared directory: ***
[2025-11-27 16:21:06] insgesamt 1307208
[2025-11-27 16:21:06] -rw-r--r-- 2 boinc boinc 407604721 27. Nov 03:00 ATLAS.root_0
[2025-11-27 16:21:06] -rw-r--r-- 2 boinc boinc    590101 27. Nov 03:00 input.tar.gz
[2025-11-27 16:21:06] -rw-r--r-- 2 boinc boinc     15847 27. Nov 03:00 start_atlas.sh
[2025-11-27 16:21:06] -rw------- 1 boinc boinc 922080763 27. Nov 16:20 HITS.pool.root.1
[2025-11-27 16:21:06] -rw------- 1 boinc boinc   8273920 27. Nov 16:21 result.tar.gz
16:21:08 (2417223): run_atlas exited; CPU time 143754.334965
16:21:08 (2417223): called boinc_finish(0)

</stderr_txt>
]]>

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