Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:04 (3385547): wrapper (7.7.26015): starting
10:31:04 (3385547): wrapper: running run_atlas (--nthreads 10)
[2025-11-21 10:31:04] Arguments: --nthreads 10
[2025-11-21 10:31:04] Threads: 10
[2025-11-21 10:31:04] Checking for CVMFS
[2025-11-21 10:31:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:31:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:31:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:31:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:31:05] 2.13.3.0 9393 22986 327144 153133 0 178 20032474 32935937 9114 16776704 0 85472315 99.548 94866587 39415 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 10:31:05] CVMFS is ok
[2025-11-21 10:31:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:31:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:31:05] Further information can be found at the LHC@home message board.
[2025-11-21 10:31:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:31:05] Checking for apptainer binary...
[2025-11-21 10:31:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:31:05] Running /usr/bin/apptainer --version
[2025-11-21 10:31:05] apptainer version 1.4.4-1.el9
[2025-11-21 10:31:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:31:05] c6-6-39-1.aglt2.org
[2025-11-21 10:31:05] apptainer works
[2025-11-21 10:31:05] Set ATHENA_PROC_NUMBER=10
[2025-11-21 10:31:05] Set ATHENA_CORE_NUMBER=10
[2025-11-21 10:31:05] Starting ATLAS job with PandaID=6893849769
[2025-11-21 10:31:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 16:57:02]  *** The last 200 lines of the pilot log: ***
[2025-11-22 16:57:02] 2025-11-22 21:56:21,088 | INFO     | monitor loop #6444: job 0:6893849769 is in state 'finished'
[2025-11-22 16:57:02] 2025-11-22 21:56:21,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:57:02] 2025-11-22 21:56:21,783 | INFO     | time since job start (109502s) is within the limit (172800.0s)
[2025-11-22 16:57:02] 2025-11-22 21:56:23,596 | INFO     | monitor loop #6445: job 0:6893849769 is in state 'finished'
[2025-11-22 16:57:02] 2025-11-22 21:56:23,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:57:02] 2025-11-22 21:56:23,802 | INFO     | time since job start (109504s) is within the limit (172800.0s)
[2025-11-22 16:57:02] 2025-11-22 21:56:25,810 | INFO     | time since job start (109506s) is within the limit (172800.0s)
[2025-11-22 16:57:02] 2025-11-22 21:56:26,110 | INFO     | monitor loop #6446: job 0:6893849769 is in state 'finished'
[2025-11-22 16:57:02] 2025-11-22 21:56:26,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:57:02] 2025-11-22 21:56:27,784 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 16:57:02] 2025-11-22 21:56:27,792 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2836.252464285714
[2025-11-22 16:57:02] 2025-11-22 21:56:27,804 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893849769/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 16:57:02] 2025-11-22 21:56:27,804 | INFO     | extracted standard info from prmon json
[2025-11-22 16:57:02] 2025-11-22 21:56:27,805 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 16:57:02] 2025-11-22 21:56:27,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 16:57:02] 2025-11-22 21:56:27,833 | INFO     | fitting pss+swap vs Time
[2025-11-22 16:57:02] 2025-11-22 21:56:27,837 | INFO     | sum of square deviations: 1793212474690.6455
[2025-11-22 16:57:02] 2025-11-22 21:56:27,844 | INFO     | time since job start (109508s) is within the limit (172800.0s)
[2025-11-22 16:57:02] 2025-11-22 21:56:27,925 | INFO     | sum of deviations: 4376450414927.6074
[2025-11-22 16:57:02] 2025-11-22 21:56:27,925 | INFO     | mean x: 1763793829.9637883
[2025-11-22 16:57:02] 2025-11-22 21:56:27,925 | INFO     | mean y: 3343758.363231198
[2025-11-22 16:57:02] 2025-11-22 21:56:27,926 | INFO     | intersect: -4301308561.392373
[2025-11-22 16:57:02] 2025-11-22 21:56:27,928 | INFO     | chi2: 10.660440330767045
[2025-11-22 16:57:02] 2025-11-22 21:56:27,931 | INFO     | sum of square deviations: 1778270456094.6062
[2025-11-22 16:57:02] 2025-11-22 21:56:28,015 | INFO     | sum of deviations: 5107395437887.233
[2025-11-22 16:57:02] 2025-11-22 21:56:28,015 | INFO     | mean x: 1763793677.4776537
[2025-11-22 16:57:02] 2025-11-22 21:56:28,015 | INFO     | mean y: 3351217.530726257
[2025-11-22 16:57:02] 2025-11-22 21:56:28,016 | INFO     | intersect: -5062465262.099556
[2025-11-22 16:57:02] 2025-11-22 21:56:28,018 | INFO     | chi2: 7.265995600646615
[2025-11-22 16:57:02] 2025-11-22 21:56:28,018 | INFO     | current chi2=7.265995600646615 (change=31.841505836524775 %)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,021 | INFO     | sum of square deviations: 1763411694872.8743
[2025-11-22 16:57:02] 2025-11-22 21:56:28,100 | INFO     | sum of deviations: 5608679625746.802
[2025-11-22 16:57:02] 2025-11-22 21:56:28,100 | INFO     | mean x: 1763793524.9915967
[2025-11-22 16:57:02] 2025-11-22 21:56:28,100 | INFO     | mean y: 3356360.3204481793
[2025-11-22 16:57:02] 2025-11-22 21:56:28,100 | INFO     | intersect: -5606537708.323381
[2025-11-22 16:57:02] 2025-11-22 21:56:28,101 | INFO     | chi2: 5.494637326845614
[2025-11-22 16:57:02] 2025-11-22 21:56:28,101 | INFO     | current chi2=5.494637326845614 (change=24.378741347481203 %)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,101 | INFO     | right removable region: 1784
[2025-11-22 16:57:02] 2025-11-22 21:56:28,102 | INFO     | sum of square deviations: 1778265130254.5598
[2025-11-22 16:57:02] 2025-11-22 21:56:28,155 | INFO     | sum of deviations: 3862115092470.24
[2025-11-22 16:57:02] 2025-11-22 21:56:28,155 | INFO     | mean x: 1763793982.477095
[2025-11-22 16:57:02] 2025-11-22 21:56:28,156 | INFO     | mean y: 3349001.969273743
[2025-11-22 16:57:02] 2025-11-22 21:56:28,156 | INFO     | intersect: -3827337009.827988
[2025-11-22 16:57:02] 2025-11-22 21:56:28,157 | INFO     | chi2: 8.721333857555722
[2025-11-22 16:57:02] 2025-11-22 21:56:28,158 | INFO     | current chi2=8.721333857555722 (change=18.18974088354378 %)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,158 | INFO     | left removable region: 10
[2025-11-22 16:57:02] 2025-11-22 21:56:28,159 | INFO     | sum of square deviations: 1731004121408.8481
[2025-11-22 16:57:02] 2025-11-22 21:56:28,210 | INFO     | sum of deviations: 5035952695560.897
[2025-11-22 16:57:02] 2025-11-22 21:56:28,210 | INFO     | mean x: 1763793799.5191658
[2025-11-22 16:57:02] 2025-11-22 21:56:28,211 | INFO     | mean y: 3364063.635287486
[2025-11-22 16:57:02] 2025-11-22 21:56:28,211 | INFO     | intersect: -5127982551.457027
[2025-11-22 16:57:02] 2025-11-22 21:56:28,213 | INFO     | chi2: 3.220589492031449
[2025-11-22 16:57:02] 2025-11-22 21:56:28,213 | INFO     | current memory leak: 2.91 B/s (using 1774 data points, chi2=3.22)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,214 | INFO     | could have reported an average CPU frequency of 2922 MHz (63 samples)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | ..............................
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . Timing measurements:
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . get job = 0 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . initial setup = 2 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . payload setup = 6 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . stage-in = 0 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . payload execution = 109465 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . stage-out = 4 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | . log creation = 1 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,215 | INFO     | ..............................
[2025-11-22 16:57:02] 2025-11-22 21:56:28,346 | INFO     | 
[2025-11-22 16:57:02] 2025-11-22 21:56:28,347 | INFO     | job summary report
[2025-11-22 16:57:02] 2025-11-22 21:56:28,347 | INFO     | --------------------------------------------------
[2025-11-22 16:57:02] 2025-11-22 21:56:28,347 | INFO     | PanDA job id: 6893849769
[2025-11-22 16:57:02] 2025-11-22 21:56:28,347 | INFO     | task id: 47523449
[2025-11-22 16:57:02] 2025-11-22 21:56:28,347 | INFO     | errors: (none)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | pilot state: finished 
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | transexitcode: 0
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | exeerrorcode: 0
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | exeerrordiag: 
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | exitcode: 0
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | exitmsg: OK
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | cpuconsumptiontime: 248360 s
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | nevents: 1000
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | neventsw: 0
[2025-11-22 16:57:02] 2025-11-22 21:56:28,348 | INFO     | pid: 3396236
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | pgrp: 3396236
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | corecount: 10
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | event service: False
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 109475: 2374057, 109481: 2383235, 109492: 2383425}
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | --------------------------------------------------
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | 
[2025-11-22 16:57:02] 2025-11-22 21:56:28,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 16:57:02] 2025-11-22 21:56:28,405 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,406 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,406 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 16:57:02] 2025-11-22 21:56:28,410 | INFO     | job 6893849769 has completed (purged errors)
[2025-11-22 16:57:02] 2025-11-22 21:56:28,410 | INFO     | overall cleanup function is called
[2025-11-22 16:57:02] 2025-11-22 21:56:29,440 | INFO     | --- collectZombieJob: --- 10, [3396236]
[2025-11-22 16:57:02] 2025-11-22 21:56:29,441 | INFO     | zombie collector waiting for pid 3396236
[2025-11-22 16:57:02] 2025-11-22 21:56:29,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 16:57:02] 2025-11-22 21:56:29,441 | INFO     | collected zombie processes
[2025-11-22 16:57:02] 2025-11-22 21:56:29,441 | INFO     | will attempt to kill all subprocesses of pid=3396236
[2025-11-22 16:57:02] 2025-11-22 21:56:29,790 | INFO     | process IDs to be killed: [3396236] (in reverse order)
[2025-11-22 16:57:02] 2025-11-22 21:56:29,913 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 16:57:02] 2025-11-22 21:56:29,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 16:57:02] 2025-11-22 21:56:29,926 | INFO     | did not find any defunct processes belonging to 3396236
[2025-11-22 16:57:02] 2025-11-22 21:56:29,938 | INFO     | did not find any defunct processes belonging to 3396236
[2025-11-22 16:57:02] 2025-11-22 21:56:29,940 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 16:57:02] 2025-11-22 21:56:29,940 | INFO     | ready for new job
[2025-11-22 16:57:02] 2025-11-22 21:56:29,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 16:57:02] 2025-11-22 21:56:29,947 | INFO     | ***************************************
[2025-11-22 16:57:02] 2025-11-22 21:56:29,948 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 16:57:02] 2025-11-22 21:56:29,948 | INFO     | ***************************************
[2025-11-22 16:57:02] 2025-11-22 21:56:29,948 | INFO     | 
[2025-11-22 16:57:02] 2025-11-22 21:56:29,951 | INFO     | architecture information:
[2025-11-22 16:57:02] 2025-11-22 21:56:29,951 | INFO     | executing command: cat /etc/os-release
[2025-11-22 16:57:02] 2025-11-22 21:56:29,976 | INFO     | cat /etc/os-release:
[2025-11-22 16:57:02] NAME="CentOS Linux"
[2025-11-22 16:57:02] VERSION="7 (Core)"
[2025-11-22 16:57:02] ID="centos"
[2025-11-22 16:57:02] ID_LIKE="rhel fedora"
[2025-11-22 16:57:02] VERSION_ID="7"
[2025-11-22 16:57:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 16:57:02] ANSI_COLOR="0;31"
[2025-11-22 16:57:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 16:57:02] HOME_URL="https://www.centos.org/"
[2025-11-22 16:57:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 16:57:02] 
[2025-11-22 16:57:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 16:57:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 16:57:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 16:57:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 16:57:02] 
[2025-11-22 16:57:02] 2025-11-22 21:56:29,977 | INFO     | ***************************************
[2025-11-22 16:57:02] 2025-11-22 21:56:30,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 16:57:02] 2025-11-22 21:56:30,509 | INFO     | sufficient remaining disk space (66696773632 B)
[2025-11-22 16:57:02] 2025-11-22 21:56:30,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 16:57:02] 2025-11-22 21:56:30,509 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 16:57:02] 2025-11-22 21:56:30,509 | INFO     | update_server=False
[2025-11-22 16:57:02] 2025-11-22 21:56:30,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 16:57:02] 2025-11-22 21:56:30,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 16:57:02] 2025-11-22 21:56:30,510 | INFO     | aborting loop
[2025-11-22 16:57:02] 2025-11-22 21:56:30,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 16:57:02] 2025-11-22 21:56:30,917 | INFO     | all data control threads have been joined
[2025-11-22 16:57:02] 2025-11-22 21:56:31,023 | INFO     | all job control threads have been joined
[2025-11-22 16:57:02] 2025-11-22 21:56:31,174 | INFO     | all payload control threads have been joined
[2025-11-22 16:57:02] 2025-11-22 21:56:31,516 | INFO     | [job] retrieve thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:31,518 | INFO     | [job] job monitor thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:31,922 | INFO     | [data] control thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:31,940 | INFO     | [payload] validate_post thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:31,964 | INFO     | [data] copytool_in thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:31,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,029 | INFO     | [job] control thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,147 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,180 | INFO     | [payload] control thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,221 | INFO     | [job] validate thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 16:57:02] 2025-11-22 21:56:32,316 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,386 | INFO     | [payload] failed_post thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,517 | INFO     | [data] copytool_out thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:32,747 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:33,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 16:57:02] 2025-11-22 21:56:34,330 | INFO     | [job] queue monitor thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:36,288 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 16:57:02] 2025-11-22 21:56:42,416 | INFO     | [monitor] cgroup control has ended
[2025-11-22 16:57:02] 2025-11-22 21:56:42,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154216470336)>', '<ExcThread(monitor, started 140153330837248)>']
[2025-11-22 16:57:02] 2025-11-22 21:56:47,689 | INFO     | all workflow threads have been joined
[2025-11-22 16:57:02] 2025-11-22 21:56:47,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 16:57:02] 2025-11-22 21:56:47,695 | INFO     | traces error code: 0
[2025-11-22 16:57:02] 2025-11-22 21:56:47,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 16:57:02] 2025-11-22 21:57:01,330 | INFO     | PID=3389642 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 16:57:02] 2025-11-22 21:57:01,330 | INFO     | .. there are 24 such processes running
[2025-11-22 16:57:02] 2025-11-22 21:57:01,331 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 16:57:02] 2025-11-22 21:57:01,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 16:57:02] 2025-11-22 21:57:01,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 16:57:02] 2025-11-22 21:57:01,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 16:57:02] 2025-11-22 21:57:01,332 | INFO     | [monitor] control thread has ended
[2025-11-22 16:57:02] 2025-11-22 21:57:01,509 [wrapper] ==== pilot stdout END ====
[2025-11-22 16:57:02] 2025-11-22 21:57:01,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 16:57:02] 2025-11-22 21:57:01,516 [wrapper] pilotpid: 3389642
[2025-11-22 16:57:02] 2025-11-22 21:57:01,519 [wrapper] Pilot exit status: 0
[2025-11-22 16:57:02] 2025-11-22 21:57:01,532 [wrapper] pandaids: 6893849769
[2025-11-22 16:57:02] 2025-11-22 21:57:01,605 [wrapper] cleanup supervisor_pilot  597065 3389643
[2025-11-22 16:57:02] 2025-11-22 21:57:01,621 [wrapper] Test setup, not cleaning
[2025-11-22 16:57:02] 2025-11-22 21:57:01,634 [wrapper] apfmon messages muted
[2025-11-22 16:57:02] 2025-11-22 21:57:01,652 [wrapper] ==== wrapper stdout END ====
[2025-11-22 16:57:02] 2025-11-22 21:57:01,673 [wrapper] ==== wrapper stderr END ====
[2025-11-22 16:57:02]  *** Error codes and diagnostics ***
[2025-11-22 16:57:02]     "exeErrorCode": 0,
[2025-11-22 16:57:02]     "exeErrorDiag": "",
[2025-11-22 16:57:02]     "pilotErrorCode": 0,
[2025-11-22 16:57:02]     "pilotErrorDiag": "",
[2025-11-22 16:57:02]  *** Listing of results directory ***
[2025-11-22 16:57:02] total 1345288
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:00 pilot3.tar.gz
[2025-11-22 16:57:02] -rwx------. 1 boincer umatlas     36292 Nov 20 06:05 runpilot2-wrapper.sh
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:05 queuedata.json
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas       100 Nov 21 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 16:57:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 10:31 run_atlas
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas       105 Nov 21 10:31 job.xml
[2025-11-22 16:57:02] -rw-r--r--. 2 boincer umatlas 411302254 Nov 21 10:31 EVNT.47493127._000306.pool.root.1
[2025-11-22 16:57:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:31 start_atlas.sh
[2025-11-22 16:57:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 10:31 shared
[2025-11-22 16:57:02] -rw-r--r--. 2 boincer umatlas    590093 Nov 21 10:31 input.tar.gz
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas         0 Nov 21 10:31 boinc_lockfile
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 10:31 pandaJob.out
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas        57 Nov 21 10:31 setup.sh.local
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas    989798 Nov 21 10:31 agis_schedconf.cvmfs.json
[2025-11-22 16:57:02] drwx------. 5 boincer umatlas      4096 Nov 21 10:31 pilot3
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas       534 Nov 22 16:28 boinc_task_state.xml
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas 929401703 Nov 22 16:55 HITS.47523449._003059.pool.root.1
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas      6845 Nov 22 16:55 init_data.xml
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas      1059 Nov 22 16:56 memory_monitor_summary.json
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas   1526164 Nov 22 16:56 agis_ddmendpoints.agis.ALL.json
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas   2901645 Nov 22 16:56 log.47523449._003059.job.log.tgz.1
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas      8636 Nov 22 16:56 heartbeat.json
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas        30 Nov 22 16:57 wrapper_checkpoint.txt
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas        95 Nov 22 16:57 pilot_heartbeat.json
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas       823 Nov 22 16:57 pilotlog.txt
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 16:57 boinc_mmap_file
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas  13573493 Nov 22 16:57 log.47523449._003059.job.log.1
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas       353 Nov 22 16:57 output.list
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas       620 Nov 22 16:57 runtime_log
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas  16496640 Nov 22 16:57 result.tar.gz
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas      9351 Nov 22 16:57 runtime_log.err
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas       664 Nov 22 16:57 a7MODmZeHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSVGKDmDJkJlm.diag
[2025-11-22 16:57:02] -rw-r--r--. 1 boincer umatlas     21549 Nov 22 16:57 stderr.txt
[2025-11-22 16:57:02] HITS file was successfully produced:
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas 929401703 Nov 22 16:55 shared/HITS.pool.root.1
[2025-11-22 16:57:02]  *** Contents of shared directory: ***
[2025-11-22 16:57:02] total 1325996
[2025-11-22 16:57:02] -rw-r--r--. 2 boincer umatlas 411302254 Nov 21 10:31 ATLAS.root_0
[2025-11-22 16:57:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:31 start_atlas.sh
[2025-11-22 16:57:02] -rw-r--r--. 2 boincer umatlas    590093 Nov 21 10:31 input.tar.gz
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas 929401703 Nov 22 16:55 HITS.pool.root.1
[2025-11-22 16:57:02] -rw-------. 1 boincer umatlas  16496640 Nov 22 16:57 result.tar.gz
16:57:03 (3385547): run_atlas exited; CPU time 250551.175494
16:57:03 (3385547): called boinc_finish(0)

</stderr_txt>
]]>

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