Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:15:39 (939122): wrapper (7.7.26015): starting
00:15:39 (939122): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 00:15:39] Arguments: --nthreads 3
[2025-11-24 00:15:39] Threads: 3
[2025-11-24 00:15:39] Checking for CVMFS
[2025-11-24 00:15:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:15:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:15:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:15:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:15:40] 2.9.2.0 4065016 7562 88948 153226 0 80 34205308 36864001 0 130560 0 2818962 99.907 430613 6899 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 00:15:40] CVMFS is ok
[2025-11-24 00:15:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:15:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:15:40] Further information can be found at the LHC@home message board.
[2025-11-24 00:15:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:15:40] Checking for apptainer binary...
[2025-11-24 00:15:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:15:40] Running /usr/bin/apptainer --version
[2025-11-24 00:15:40] apptainer version 1.4.1-1.1
[2025-11-24 00:15:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:15:40] thA312a
[2025-11-24 00:15:40] apptainer works
[2025-11-24 00:15:40] Set ATHENA_PROC_NUMBER=3
[2025-11-24 00:15:40] Set ATHENA_CORE_NUMBER=3
[2025-11-24 00:15:40] Starting ATLAS job with PandaID=6893880123
[2025-11-24 00:15:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 08:08:23]  *** The last 200 lines of the pilot log: ***
[2025-11-24 08:08:23] 2025-11-24 07:07:30,827 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 08:08:23] 2025-11-24 07:07:37,236 | INFO     | job.realtimelogging is not enabled
[2025-11-24 08:08:23] 2025-11-24 07:07:38,242 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 08:08:23] 2025-11-24 07:07:57,299 | INFO     | PID=942858 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 08:08:23] 2025-11-24 07:07:57,299 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 08:08:23] 2025-11-24 07:07:57,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 08:08:23] 2025-11-24 07:07:57,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 08:08:23] 2025-11-24 07:08:17,303 | INFO     | [monitor] cgroup control has ended
[2025-11-24 08:08:23] 2025-11-24 07:08:17,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361737529152)>', '<ExcThread(monitor, started 140360714012416)>']
[2025-11-24 08:08:23] 2025-11-24 07:08:18,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 08:08:23] 2025-11-24 07:08:18,409 | INFO     | [monitor] control thread has ended
[2025-11-24 08:08:23] 2025-11-24 07:08:23,007 | INFO     | all workflow threads have been joined
[2025-11-24 08:08:23] 2025-11-24 07:08:23,007 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 08:08:23] 2025-11-24 07:08:23,007 | INFO     | traces error code: 0
[2025-11-24 08:08:23] 2025-11-24 07:08:23,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 08:08:23] 2025-11-24 07:08:23,061 [wrapper] ==== pilot stdout END ====
[2025-11-24 08:08:23] 2025-11-24 07:08:23,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 08:08:23] 2025-11-24 07:08:23,066 [wrapper] pilotpid: 942858
[2025-11-24 08:08:23] 2025-11-24 07:08:23,068 [wrapper] Pilot exit status: 0
[2025-11-24 08:08:23] 2025-11-24 07:08:23,076 [wrapper] pandaids: 6893880123
[2025-11-24 08:08:23] 2025-11-24 07:08:23,095 [wrapper] cleanup supervisor_pilot 1004182 942859
[2025-11-24 08:08:23] 2025-11-24 07:08:23,098 [wrapper] Test setup, not cleaning
[2025-11-24 08:08:23] 2025-11-24 07:08:23,100 [wrapper] apfmon messages muted
[2025-11-24 08:08:23] 2025-11-24 07:08:23,103 [wrapper] ==== wrapper stdout END ====
[2025-11-24 08:08:23] 2025-11-24 07:08:23,105 [wrapper] ==== wrapper stderr END ====
[2025-11-24 08:08:23]  *** Error codes and diagnostics ***
[2025-11-24 08:08:23]     "exeErrorCode": 0,
[2025-11-24 08:08:23]     "exeErrorDiag": "",
[2025-11-24 08:08:23]     "pilotErrorCode": 0,
[2025-11-24 08:08:23]     "pilotErrorDiag": "",
[2025-11-24 08:08:23]  *** Listing of results directory ***
[2025-11-24 08:08:23] total 1310608
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc    576529 Nov 20 20:10 pilot3.tar.gz
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc      5112 Nov 20 20:33 queuedata.json
[2025-11-24 08:08:23] -rwx------ 1 boinc boinc     36292 Nov 20 20:33 runpilot2-wrapper.sh
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc       100 Nov 24 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 08:08:23] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 00:15 run_atlas
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc       105 Nov 24 00:15 job.xml
[2025-11-24 08:08:23] -rw-r--r-- 2 boinc boinc 411016651 Nov 24 00:15 EVNT.47493127._000837.pool.root.1
[2025-11-24 08:08:23] -rw-r--r-- 2 boinc boinc    590100 Nov 24 00:15 input.tar.gz
[2025-11-24 08:08:23] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:15 start_atlas.sh
[2025-11-24 08:08:23] drwxrwx--x 2 boinc boinc      4096 Nov 24 00:15 shared
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:15 boinc_setup_complete
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc      6447 Nov 24 00:15 init_data.xml
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:15 boinc_lockfile
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc      2785 Nov 24 00:15 pandaJob.out
[2025-11-24 08:08:23] -rw------- 1 boinc boinc    989786 Nov 24 00:15 agis_schedconf.cvmfs.json
[2025-11-24 08:08:23] drwx------ 5 boinc boinc      4096 Nov 24 00:15 pilot3
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc       531 Nov 24 08:03 boinc_task_state.xml
[2025-11-24 08:08:23] -rw------- 1 boinc boinc 916851280 Nov 24 08:07 HITS.47523449._008370.pool.root.1
[2025-11-24 08:08:23] -rw------- 1 boinc boinc      1023 Nov 24 08:07 memory_monitor_summary.json
[2025-11-24 08:08:23] -rw------- 1 boinc boinc        95 Nov 24 08:07 pilot_heartbeat.json
[2025-11-24 08:08:23] -rw------- 1 boinc boinc   1526164 Nov 24 08:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 08:08:23] -rw------- 1 boinc boinc   1167729 Nov 24 08:07 log.47523449._008370.job.log.tgz.1
[2025-11-24 08:08:23] -rw------- 1 boinc boinc      8570 Nov 24 08:07 heartbeat.json
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc      8192 Nov 24 08:08 boinc_mmap_file
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc        28 Nov 24 08:08 wrapper_checkpoint.txt
[2025-11-24 08:08:23] -rw------- 1 boinc boinc      5009 Nov 24 08:08 pilotlog.txt
[2025-11-24 08:08:23] -rw------- 1 boinc boinc   3978185 Nov 24 08:08 log.47523449._008370.job.log.1
[2025-11-24 08:08:23] -rw------- 1 boinc boinc       353 Nov 24 08:08 output.list
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc       620 Nov 24 08:08 runtime_log
[2025-11-24 08:08:23] -rw------- 1 boinc boinc   5160960 Nov 24 08:08 result.tar.gz
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc      8903 Nov 24 08:08 runtime_log.err
[2025-11-24 08:08:23] -rw------- 1 boinc boinc       666 Nov 24 08:08 f0iNDmmaPg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD1GKDmttY8xm.diag
[2025-11-24 08:08:23] -rw-r--r-- 1 boinc boinc      5008 Nov 24 08:08 stderr.txt
[2025-11-24 08:08:23] HITS file was successfully produced:
[2025-11-24 08:08:23] -rw------- 1 boinc boinc 916851280 Nov 24 08:07 shared/HITS.pool.root.1
[2025-11-24 08:08:23]  *** Contents of shared directory: ***
[2025-11-24 08:08:23] total 1302392
[2025-11-24 08:08:23] -rw-r--r-- 2 boinc boinc 411016651 Nov 24 00:15 ATLAS.root_0
[2025-11-24 08:08:23] -rw-r--r-- 2 boinc boinc    590100 Nov 24 00:15 input.tar.gz
[2025-11-24 08:08:23] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:15 start_atlas.sh
[2025-11-24 08:08:23] -rw------- 1 boinc boinc 916851280 Nov 24 08:07 HITS.pool.root.1
[2025-11-24 08:08:23] -rw------- 1 boinc boinc   5160960 Nov 24 08:08 result.tar.gz
08:08:24 (939122): run_atlas exited; CPU time 83417.648063
08:08:24 (939122): called boinc_finish(0)

</stderr_txt>
]]>

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