Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:10:58 (3582468): wrapper (7.7.26015): starting
22:10:58 (3582468): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 22:10:58] Arguments: --nthreads 12
[2025-11-20 22:10:58] Threads: 12
[2025-11-20 22:10:58] Checking for CVMFS
[2025-11-20 22:10:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:10:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:10:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:11:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:11:00] 2.11.5.0 3627452 20497 257412 153110 1 651 45449834 45568000 20101 130560 0 214885518 99.812 120132831 28568 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-20 22:11:00] CVMFS is ok
[2025-11-20 22:11:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:11:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:11:00] Further information can be found at the LHC@home message board.
[2025-11-20 22:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:11:00] Checking for apptainer binary...
[2025-11-20 22:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:11:00] Running /usr/bin/apptainer --version
[2025-11-20 22:11:00] apptainer version 1.4.1-1.el9
[2025-11-20 22:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:11:01] wns0050.triumf.lcg
[2025-11-20 22:11:01] apptainer works
[2025-11-20 22:11:01] Set ATHENA_PROC_NUMBER=12
[2025-11-20 22:11:01] Set ATHENA_CORE_NUMBER=12
[2025-11-20 22:11:01] Starting ATLAS job with PandaID=6893935516
[2025-11-20 22:11:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 22:16:45]  *** The last 200 lines of the pilot log: ***
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | WARNING  | wrong length of table data, x=[1763705571.0], y=[1076.0] (must be same and length>=4)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | could have reported an average CPU frequency of 2652 MHz (4 samples)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | ..............................
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . Timing measurements:
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . get job = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . initial setup = 3 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . payload setup = 15 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . stage-in = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . payload execution = 48 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . stage-out = 2 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . log creation = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | ..............................
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935516/pilotlog.txt
[2025-11-20 22:16:45] 2025-11-21 06:15:39,993 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 22:16:45] - Log from pilotlog.txt -
[2025-11-20 22:16:45] 2025-11-21 06:15:39,874 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893935516/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | INFO     | extracted standard info from prmon json
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | WARNING  | wrong length of table data, x=[1763705571.0], y=[1076.0] (must be same and length>=4)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | could have reported an average CPU frequency of 2652 MHz (4 samples)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | ..............................
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . Timing measurements:
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . get job = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . initial setup = 3 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . payload setup = 15 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . stage-in = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . payload execution = 48 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . stage-out = 2 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . log creation = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | ..............................
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935516/pilotlog.txt
[2025-11-20 22:16:45] 2025-11-21 06:15:39,993 | WARNING  | 
[2025-11-20 22:16:45] [begin log extracts]
[2025-11-20 22:16:45] - Log from pilotlog.txt -
[2025-11-20 22:16:45] 2025-11-21 06:15:39,874 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893935516/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | INFO     | extracted standard info from prmon json
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 22:16:45] 2025-11-21 06:15:39,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | WARNING  | wrong length of table data, x=[1763705571.0], y=[1076.0] (must be same and length>=4)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | could have reported an average CPU frequency of 2652 MHz (4 samples)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | ..............................
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . Timing measurements:
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . get job = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . initial setup = 3 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . payload setup = 15 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,884 | INFO     | . stage-in = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . payload execution = 48 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . stage-out = 2 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | . log creation = 0 s
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | ..............................
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 22:16:45] 2025-11-21 06:15:39,885 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935516/pilotlog.txt
[2025-11-20 22:16:45] [end log extracts]
[2025-11-20 22:16:45] 2025-11-21 06:15:39,993 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-20 22:16:45] 2025-11-21 06:15:39,994 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 22:16:45] 2025-11-21 06:15:40,183 | INFO     | time since job start (242s) is within the limit (172800.0s)
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | 
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | job summary report
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | --------------------------------------------------
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | PanDA job id: 6893935516
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | task id: 47523634
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 22:13:15,184 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | pilot state: failed 
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | transexitcode: 65
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | exeerrorcode: 65
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | exitcode: 65
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | cpuconsumptiontime: 17 s
[2025-11-20 22:16:45] 2025-11-21 06:15:40,194 | INFO     | nevents: 0
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | neventsw: 0
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | pid: 3593278
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | pgrp: 3593278
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | corecount: 12
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | event service: False
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | sizes: {0: 2298226, 1: 2298310, 2: 2298509, 14: 2298509, 23: 2298799, 24: 2298827, 67: 2322218, 68: 2322194, 70: 2326514, 72: 2326542, 203: 2326708}
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | --------------------------------------------------
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | 
[2025-11-20 22:16:45] 2025-11-21 06:15:40,195 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 22:16:45] 2025-11-21 06:15:40,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 22:16:45] 2025-11-21 06:15:40,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,315 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 22:16:45] 2025-11-21 06:15:40,315 | INFO     | job 6893935516 has completed (purged errors)
[2025-11-20 22:16:45] 2025-11-21 06:15:40,315 | INFO     | overall cleanup function is called
[2025-11-20 22:16:45] 2025-11-21 06:15:41,322 | INFO     | --- collectZombieJob: --- 10, [3593278]
[2025-11-20 22:16:45] 2025-11-21 06:15:41,322 | INFO     | zombie collector waiting for pid 3593278
[2025-11-20 22:16:45] 2025-11-21 06:15:41,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 22:16:45] 2025-11-21 06:15:41,322 | INFO     | collected zombie processes
[2025-11-20 22:16:45] 2025-11-21 06:15:41,322 | INFO     | will attempt to kill all subprocesses of pid=3593278
[2025-11-20 22:16:45] 2025-11-21 06:15:41,970 | INFO     | process IDs to be killed: [3593278] (in reverse order)
[2025-11-20 22:16:45] 2025-11-21 06:15:42,044 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 22:16:45] 2025-11-21 06:15:42,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 22:16:45] 2025-11-21 06:15:42,091 | INFO     | did not find any defunct processes belonging to 3593278
[2025-11-20 22:16:45] 2025-11-21 06:15:42,139 | INFO     | did not find any defunct processes belonging to 3593278
[2025-11-20 22:16:45] 2025-11-21 06:15:42,140 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 22:16:45] 2025-11-21 06:15:42,140 | INFO     | ready for new job
[2025-11-20 22:16:45] 2025-11-21 06:15:42,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 22:16:45] 2025-11-21 06:15:42,141 | INFO     | ***************************************
[2025-11-20 22:16:45] 2025-11-21 06:15:42,141 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 22:16:45] 2025-11-21 06:15:42,142 | INFO     | ***************************************
[2025-11-20 22:16:45] 2025-11-21 06:15:42,142 | INFO     | 
[2025-11-20 22:16:45] 2025-11-21 06:15:42,155 | INFO     | architecture information:
[2025-11-20 22:16:45] 2025-11-21 06:15:42,163 | INFO     | executing command: cat /etc/os-release
[2025-11-20 22:16:45] 2025-11-21 06:15:42,193 | INFO     | cat /etc/os-release:
[2025-11-20 22:16:45] NAME="CentOS Linux"
[2025-11-20 22:16:45] VERSION="7 (Core)"
[2025-11-20 22:16:45] ID="centos"
[2025-11-20 22:16:45] ID_LIKE="rhel fedora"
[2025-11-20 22:16:45] VERSION_ID="7"
[2025-11-20 22:16:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 22:16:45] ANSI_COLOR="0;31"
[2025-11-20 22:16:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 22:16:45] HOME_URL="https://www.centos.org/"
[2025-11-20 22:16:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 22:16:45] 
[2025-11-20 22:16:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 22:16:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 22:16:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 22:16:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 22:16:45] 
[2025-11-20 22:16:45] 2025-11-21 06:15:42,193 | INFO     | ***************************************
[2025-11-20 22:16:45] 2025-11-21 06:15:42,697 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 22:16:45] 2025-11-21 06:15:42,775 | INFO     | sufficient remaining disk space (1981345169408 B)
[2025-11-20 22:16:45] 2025-11-21 06:15:42,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 22:16:45] 2025-11-21 06:15:42,776 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 22:16:45] 2025-11-21 06:15:42,776 | INFO     | update_server=False
[2025-11-20 22:16:45] 2025-11-21 06:15:42,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 22:16:45] 2025-11-21 06:15:43,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 22:16:45] 2025-11-21 06:15:43,510 | INFO     | all data control threads have been joined
[2025-11-20 22:16:45] 2025-11-21 06:15:43,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:16:45] 2025-11-21 06:15:43,659 | INFO     | aborting loop
[2025-11-20 22:16:45] 2025-11-21 06:15:43,782 | INFO     | [job] retrieve thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:43,812 | INFO     | all job control threads have been joined
[2025-11-20 22:16:45] 2025-11-21 06:15:43,836 | INFO     | all payload control threads have been joined
[2025-11-20 22:16:45] 2025-11-21 06:15:44,388 | INFO     | [payload] validate_post thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,516 | INFO     | [data] control thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,656 | INFO     | [job] validate thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,666 | INFO     | [job] job monitor thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,751 | INFO     | [payload] failed_post thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,818 | INFO     | [job] control thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,842 | INFO     | [payload] control thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:44,975 | INFO     | [data] copytool_in thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:45,045 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:45,054 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:45,176 | INFO     | [data] copytool_out thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:45,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:16:45] 2025-11-21 06:15:45,211 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:46,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 22:16:45] 2025-11-21 06:15:46,198 | INFO     | [job] queue monitor thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:15:50,126 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 22:16:45] 2025-11-21 06:16:13,823 | INFO     | PID=3586330 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 22:16:45] 2025-11-21 06:16:13,823 | INFO     | .. there are 35 such processes running
[2025-11-20 22:16:45] 2025-11-21 06:16:13,823 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 22:16:45] 2025-11-21 06:16:13,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 22:16:45] 2025-11-21 06:16:13,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 22:16:45] 2025-11-21 06:16:37,622 | INFO     | [monitor] cgroup control has ended
[2025-11-20 22:16:45] 2025-11-21 06:16:38,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647668889408)>', '<ExcThread(monitor, started 139647262893824)>']
[2025-11-20 22:16:45] 2025-11-21 06:16:38,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 22:16:45] 2025-11-21 06:16:38,996 | INFO     | [monitor] control thread has ended
[2025-11-20 22:16:45] 2025-11-21 06:16:43,052 | INFO     | all workflow threads have been joined
[2025-11-20 22:16:45] 2025-11-21 06:16:43,052 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 22:16:45] 2025-11-21 06:16:43,052 | INFO     | traces error code: 0
[2025-11-20 22:16:45] 2025-11-21 06:16:43,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 22:16:45] 2025-11-21 06:16:43,678 [wrapper] ==== pilot stdout END ====
[2025-11-20 22:16:45] 2025-11-21 06:16:43,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 22:16:45] 2025-11-21 06:16:43,745 [wrapper] pilotpid: 3586330
[2025-11-20 22:16:45] 2025-11-21 06:16:43,756 [wrapper] Pilot exit status: 0
[2025-11-20 22:16:45] 2025-11-21 06:16:43,939 [wrapper] pandaids: 6893935516
[2025-11-20 22:16:45] 2025-11-21 06:16:44,644 [wrapper] cleanup supervisor_pilot 3586336 3586331
[2025-11-20 22:16:45] 2025-11-21 06:16:44,677 [wrapper] Test setup, not cleaning
[2025-11-20 22:16:45] 2025-11-21 06:16:44,695 [wrapper] apfmon messages muted
[2025-11-20 22:16:45] 2025-11-21 06:16:44,729 [wrapper] ==== wrapper stdout END ====
[2025-11-20 22:16:45] 2025-11-21 06:16:44,750 [wrapper] ==== wrapper stderr END ====
[2025-11-20 22:16:45]  *** Error codes and diagnostics ***
[2025-11-20 22:16:45]     "exeErrorCode": 65,
[2025-11-20 22:16:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-20 22:16:45]     "pilotErrorCode": 1305,
[2025-11-20 22:16:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-20 22:16:45]  *** Listing of results directory ***
[2025-11-20 22:16:45] total 298188
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc      5112 Nov 20 16:53 queuedata.json
[2025-11-20 22:16:45] -rwx------. 1 boinc boinc     36292 Nov 20 16:54 runpilot2-wrapper.sh
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc    576529 Nov 20 16:54 pilot3.tar.gz
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc       100 Nov 20 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 22:16:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 22:10 run_atlas
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc       105 Nov 20 22:10 job.xml
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc      6594 Nov 20 22:10 init_data.xml
[2025-11-20 22:16:45] -rw-r--r--. 2 boinc boinc 301192292 Nov 20 22:10 EVNT.47523632._000002.pool.root.1
[2025-11-20 22:16:45] drwxrwx--x. 2 boinc boinc      4096 Nov 20 22:10 shared
[2025-11-20 22:16:45] -rw-r--r--. 2 boinc boinc    589949 Nov 20 22:10 input.tar.gz
[2025-11-20 22:16:45] -rw-r--r--. 2 boinc boinc     15847 Nov 20 22:10 start_atlas.sh
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc         0 Nov 20 22:10 boinc_lockfile
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc      2628 Nov 20 22:11 pandaJob.out
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc    989817 Nov 20 22:11 agis_schedconf.cvmfs.json
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc   1526164 Nov 20 22:11 agis_ddmendpoints.agis.ALL.json
[2025-11-20 22:16:45] drwx------. 5 boinc boinc      4096 Nov 20 22:11 pilot3
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc       965 Nov 20 22:13 memory_monitor_summary.json
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc     21917 Nov 20 22:13 log.47523634._000027.job.log.tgz.1
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc        95 Nov 20 22:15 pilot_heartbeat.json
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc      8386 Nov 20 22:15 heartbeat.json
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc       523 Nov 20 22:16 boinc_task_state.xml
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc      4823 Nov 20 22:16 pilotlog.txt
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc     94422 Nov 20 22:16 log.47523634._000027.job.log.1
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc       188 Nov 20 22:16 output.list
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc       620 Nov 20 22:16 runtime_log
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc    133120 Nov 20 22:16 result.tar.gz
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc      8192 Nov 20 22:16 boinc_mmap_file
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc        22 Nov 20 22:16 wrapper_checkpoint.txt
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc      8636 Nov 20 22:16 runtime_log.err
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc       647 Nov 20 22:16 C0hKDmHbUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtlIKDmvpu1No.diag
[2025-11-20 22:16:45] -rw-r--r--. 1 boinc boinc     21973 Nov 20 22:16 stderr.txt
[2025-11-20 22:16:45] No HITS result produced
[2025-11-20 22:16:45]  *** Contents of shared directory: ***
[2025-11-20 22:16:45] total 294868
[2025-11-20 22:16:45] -rw-r--r--. 2 boinc boinc 301192292 Nov 20 22:10 ATLAS.root_0
[2025-11-20 22:16:45] -rw-r--r--. 2 boinc boinc    589949 Nov 20 22:10 input.tar.gz
[2025-11-20 22:16:45] -rw-r--r--. 2 boinc boinc     15847 Nov 20 22:10 start_atlas.sh
[2025-11-20 22:16:45] -rw-------. 1 boinc boinc    133120 Nov 20 22:16 result.tar.gz
22:16:47 (3582468): run_atlas exited; CPU time 27.187510
22:16:47 (3582468): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN