Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:32:40 (13343): wrapper (7.7.26015): starting
00:32:40 (13343): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:32:40] Arguments: --nthreads 8
[2025-11-24 00:32:40] Threads: 8
[2025-11-24 00:32:40] Checking for CVMFS
[2025-11-24 00:32:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:32:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:32:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:32:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:32:42] 2.11.2.0 23762 281734 141268 153226 0 186 12722203 25165825 4345 130560 2 129659613 99.868 84619859 3280 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 00:32:42] CVMFS is ok
[2025-11-24 00:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:32:42] Checking for apptainer binary...
[2025-11-24 00:32:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:32:42] Running /usr/bin/apptainer --version
[2025-11-24 00:32:43] apptainer version 1.3.2-1.el7
[2025-11-24 00:32:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:32:47] cg-vwn242.simple-grid.lan
[2025-11-24 00:32:47] apptainer works
[2025-11-24 00:32:47] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:32:47] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:32:47] Starting ATLAS job with PandaID=6893878716
[2025-11-24 00:32:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:34:47]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:34:47] 2025-11-24 23:33:21,864 | INFO     | monitor loop #5757: job 0:6893878716 is in state 'finished'
[2025-11-25 00:34:47] 2025-11-24 23:33:21,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:34:47] 2025-11-24 23:33:22,084 | INFO     | time since job start (86297s) is within the limit (172800.0s)
[2025-11-25 00:34:47] 2025-11-24 23:33:23,261 | INFO     | PID=17371 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:34:47] 2025-11-24 23:33:23,262 | INFO     | .. there are 2 such processes running
[2025-11-25 00:34:47] 2025-11-24 23:33:24,263 | INFO     | time since job start (86299s) is within the limit (172800.0s)
[2025-11-25 00:34:47] 2025-11-24 23:33:24,377 | INFO     | monitor loop #5758: job 0:6893878716 is in state 'finished'
[2025-11-25 00:34:47] 2025-11-24 23:33:24,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:34:47] 2025-11-24 23:33:26,270 | INFO     | time since job start (86301s) is within the limit (172800.0s)
[2025-11-25 00:34:47] 2025-11-24 23:33:26,882 | INFO     | monitor loop #5759: job 0:6893878716 is in state 'finished'
[2025-11-25 00:34:47] 2025-11-24 23:33:26,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:34:47] 2025-11-24 23:33:28,284 | INFO     | time since job start (86303s) is within the limit (172800.0s)
[2025-11-25 00:34:47] 2025-11-24 23:33:29,390 | INFO     | monitor loop #5760: job 0:6893878716 is in state 'finished'
[2025-11-25 00:34:47] 2025-11-24 23:33:29,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:34:47] 2025-11-24 23:33:30,298 | INFO     | time since job start (86305s) is within the limit (172800.0s)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,501 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 00:34:47] 2025-11-24 23:33:31,504 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 00:34:47] 2025-11-24 23:33:31,507 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893878716/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,508 | INFO     | extracted standard info from prmon json
[2025-11-25 00:34:47] 2025-11-24 23:33:31,508 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:34:47] 2025-11-24 23:33:31,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:34:47] 2025-11-24 23:33:31,586 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:34:47] 2025-11-24 23:33:31,588 | INFO     | sum of square deviations: 865529450859.061
[2025-11-25 00:34:47] 2025-11-24 23:33:31,656 | INFO     | sum of deviations: 1753370193276.2332
[2025-11-25 00:34:47] 2025-11-24 23:33:31,656 | INFO     | mean x: 1763984160.7180398
[2025-11-25 00:34:47] 2025-11-24 23:33:31,656 | INFO     | mean y: 2848661.1995738638
[2025-11-25 00:34:47] 2025-11-24 23:33:31,656 | INFO     | intersect: -3570590978.2541738
[2025-11-25 00:34:47] 2025-11-24 23:33:31,658 | INFO     | chi2: 20.60594695434703
[2025-11-25 00:34:47] 2025-11-24 23:33:31,660 | INFO     | sum of square deviations: 856341745836.617
[2025-11-25 00:34:47] 2025-11-24 23:33:31,729 | INFO     | sum of deviations: 2213112949814.5996
[2025-11-25 00:34:47] 2025-11-24 23:33:31,729 | INFO     | mean x: 1763984008.2223806
[2025-11-25 00:34:47] 2025-11-24 23:33:31,729 | INFO     | mean y: 2856290.783321454
[2025-11-25 00:34:47] 2025-11-24 23:33:31,730 | INFO     | intersect: -4555949665.883943
[2025-11-25 00:34:47] 2025-11-24 23:33:31,731 | INFO     | chi2: 17.373495707502837
[2025-11-25 00:34:47] 2025-11-24 23:33:31,731 | INFO     | current chi2=17.373495707502837 (change=15.68698227752292 %)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,732 | INFO     | right removable region: 1402
[2025-11-25 00:34:47] 2025-11-24 23:33:31,734 | INFO     | sum of square deviations: 856340699686.6166
[2025-11-25 00:34:47] 2025-11-24 23:33:31,792 | INFO     | sum of deviations: 1284678407783.148
[2025-11-25 00:34:47] 2025-11-24 23:33:31,792 | INFO     | mean x: 1763984313.2223806
[2025-11-25 00:34:47] 2025-11-24 23:33:31,793 | INFO     | mean y: 2856436.8617248754
[2025-11-25 00:34:47] 2025-11-24 23:33:31,793 | INFO     | intersect: -2643464775.821838
[2025-11-25 00:34:47] 2025-11-24 23:33:31,794 | INFO     | chi2: 17.71729063675753
[2025-11-25 00:34:47] 2025-11-24 23:33:31,795 | INFO     | current chi2=17.71729063675753 (change=14.018556506960772 %)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,795 | INFO     | left removable region: 10
[2025-11-25 00:34:47] 2025-11-24 23:33:31,797 | INFO     | sum of square deviations: 836356590507.8143
[2025-11-25 00:34:47] 2025-11-24 23:33:31,851 | INFO     | sum of deviations: 1710321121935.25
[2025-11-25 00:34:47] 2025-11-24 23:33:31,851 | INFO     | mean x: 1763984282.7277298
[2025-11-25 00:34:47] 2025-11-24 23:33:31,851 | INFO     | mean y: 2868056.040229885
[2025-11-25 00:34:47] 2025-11-24 23:33:31,851 | INFO     | intersect: -3604420523.6781473
[2025-11-25 00:34:47] 2025-11-24 23:33:31,853 | INFO     | chi2: 13.489635985209935
[2025-11-25 00:34:47] 2025-11-24 23:33:31,853 | INFO     | current memory leak: 2.04 B/s (using 1392 data points, chi2=13.49)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | ..............................
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | . Timing measurements:
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | . get job = 0 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | . initial setup = 3 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | . payload setup = 76 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,855 | INFO     | . stage-in = 0 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,856 | INFO     | . payload execution = 85965 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,856 | INFO     | . stage-out = 5 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,856 | INFO     | . log creation = 2 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,856 | INFO     | ..............................
[2025-11-25 00:34:47] 2025-11-24 23:33:31,992 | INFO     | 
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | job summary report
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | --------------------------------------------------
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | PanDA job id: 6893878716
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | task id: 47523449
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | errors: (none)
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | pilot state: finished 
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | transexitcode: 0
[2025-11-25 00:34:47] 2025-11-24 23:33:31,993 | INFO     | exeerrorcode: 0
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | exeerrordiag: 
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | exitcode: 0
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | exitmsg: OK
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | cpuconsumptiontime: 343670 s
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | nevents: 1000
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | neventsw: 0
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | pid: 24341
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | pgrp: 24341
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | corecount: 8
[2025-11-25 00:34:47] 2025-11-24 23:33:31,994 | INFO     | event service: False
[2025-11-25 00:34:47] 2025-11-24 23:33:31,995 | INFO     | sizes: {0: 2298585, 1: 2298784, 12: 2298784, 23: 2298812, 33: 2298840, 44: 2298896, 55: 2299052, 66: 2299080, 69: 2299370, 76: 2299398, 86046: 2359302, 86052: 2369
[2025-11-25 00:34:47] 2025-11-24 23:33:31,995 | INFO     | --------------------------------------------------
[2025-11-25 00:34:47] 2025-11-24 23:33:31,995 | INFO     | 
[2025-11-25 00:34:47] 2025-11-24 23:33:31,995 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-25 00:34:47] 2025-11-24 23:33:32,307 | INFO     | time since job start (86307s) is within the limit (172800.0s)
[2025-11-25 00:34:47] 2025-11-24 23:33:32,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:34:47] 2025-11-24 23:33:32,601 | INFO     | job 6893878716 has completed (purged errors)
[2025-11-25 00:34:47] 2025-11-24 23:33:32,601 | INFO     | overall cleanup function is called
[2025-11-25 00:34:47] 2025-11-24 23:33:33,622 | INFO     | --- collectZombieJob: --- 10, [24341]
[2025-11-25 00:34:47] 2025-11-24 23:33:33,622 | INFO     | zombie collector waiting for pid 24341
[2025-11-25 00:34:47] 2025-11-24 23:33:33,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:34:47] 2025-11-24 23:33:33,623 | INFO     | collected zombie processes
[2025-11-25 00:34:47] 2025-11-24 23:33:33,623 | INFO     | will attempt to kill all subprocesses of pid=24341
[2025-11-25 00:34:47] 2025-11-24 23:33:33,705 | INFO     | process IDs to be killed: [24341] (in reverse order)
[2025-11-25 00:34:47] 2025-11-24 23:33:34,753 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:34:47] 2025-11-24 23:33:34,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:34:47] 2025-11-24 23:33:34,755 | INFO     | did not find any defunct processes belonging to 24341
[2025-11-25 00:34:47] 2025-11-24 23:33:34,757 | INFO     | did not find any defunct processes belonging to 24341
[2025-11-25 00:34:47] 2025-11-24 23:33:34,786 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:34:47] 2025-11-24 23:33:34,787 | INFO     | ready for new job
[2025-11-25 00:34:47] 2025-11-24 23:33:34,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:34:47] 2025-11-24 23:33:34,792 | INFO     | ***************************************
[2025-11-25 00:34:47] 2025-11-24 23:33:34,792 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:34:47] 2025-11-24 23:33:34,792 | INFO     | ***************************************
[2025-11-25 00:34:47] 2025-11-24 23:33:34,792 | INFO     | 
[2025-11-25 00:34:47] 2025-11-24 23:33:34,793 | INFO     | pilot is running in a VM
[2025-11-25 00:34:47] 2025-11-24 23:33:34,793 | INFO     | architecture information:
[2025-11-25 00:34:47] 2025-11-24 23:33:34,799 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:34:47] 2025-11-24 23:33:35,094 | INFO     | cat /etc/os-release:
[2025-11-25 00:34:47] NAME="CentOS Linux"
[2025-11-25 00:34:47] VERSION="7 (Core)"
[2025-11-25 00:34:47] ID="centos"
[2025-11-25 00:34:47] ID_LIKE="rhel fedora"
[2025-11-25 00:34:47] VERSION_ID="7"
[2025-11-25 00:34:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:34:47] ANSI_COLOR="0;31"
[2025-11-25 00:34:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:34:47] HOME_URL="https://www.centos.org/"
[2025-11-25 00:34:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:34:47] 
[2025-11-25 00:34:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:34:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:34:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:34:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:34:47] 
[2025-11-25 00:34:47] 2025-11-24 23:33:35,095 | INFO     | ***************************************
[2025-11-25 00:34:47] 2025-11-24 23:33:35,598 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-25 00:34:47] 2025-11-24 23:33:35,880 | INFO     | sufficient remaining disk space (492863225856 B)
[2025-11-25 00:34:47] 2025-11-24 23:33:35,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:34:47] 2025-11-24 23:33:35,880 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:34:47] 2025-11-24 23:33:35,880 | INFO     | update_server=False
[2025-11-25 00:34:47] 2025-11-24 23:33:35,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:34:47] 2025-11-24 23:33:35,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:34:47] 2025-11-24 23:33:35,884 | INFO     | aborting loop
[2025-11-25 00:34:47] 2025-11-24 23:33:35,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:34:47] 2025-11-24 23:33:36,160 | INFO     | all job control threads have been joined
[2025-11-25 00:34:47] 2025-11-24 23:33:36,396 | INFO     | all data control threads have been joined
[2025-11-25 00:34:47] 2025-11-24 23:33:36,876 | INFO     | all payload control threads have been joined
[2025-11-25 00:34:47] 2025-11-24 23:33:36,886 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:36,891 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:36,894 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:36,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:36,984 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:34:47] 2025-11-24 23:33:37,092 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,166 | INFO     | [job] control thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,402 | INFO     | [data] control thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:34:47] 2025-11-24 23:33:37,424 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,604 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,739 | INFO     | [job] validate thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,850 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,882 | INFO     | [payload] control thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:37,954 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:38,013 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:33:41,419 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:34:47] 2025-11-24 23:34:05,423 | INFO     | PID=17371 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:34:47] 2025-11-24 23:34:05,423 | INFO     | .. there are 2 such processes running
[2025-11-25 00:34:47] 2025-11-24 23:34:05,423 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:34:47] 2025-11-24 23:34:05,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:34:47] 2025-11-24 23:34:05,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:34:47] 2025-11-24 23:34:35,776 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:34:47] 2025-11-24 23:34:36,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025974114112)>', '<ExcThread(monitor, started 140025379411712)>']
[2025-11-25 00:34:47] 2025-11-24 23:34:37,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:34:47] 2025-11-24 23:34:37,615 | INFO     | [monitor] control thread has ended
[2025-11-25 00:34:47] 2025-11-24 23:34:41,753 | INFO     | all workflow threads have been joined
[2025-11-25 00:34:47] 2025-11-24 23:34:41,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:34:47] 2025-11-24 23:34:41,754 | INFO     | traces error code: 0
[2025-11-25 00:34:47] 2025-11-24 23:34:41,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:34:47] 2025-11-24 23:34:42,268 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:34:47] 2025-11-24 23:34:42,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:34:47] 2025-11-24 23:34:42,487 [wrapper] pilotpid: 17371
[2025-11-25 00:34:47] 2025-11-24 23:34:42,639 [wrapper] Pilot exit status: 0
[2025-11-25 00:34:47] 2025-11-24 23:34:43,050 [wrapper] pandaids: 6893878716
[2025-11-25 00:34:47] 2025-11-24 23:34:44,189 [wrapper] cleanup supervisor_pilot  7559 17372
[2025-11-25 00:34:47] 2025-11-24 23:34:44,325 [wrapper] Test setup, not cleaning
[2025-11-25 00:34:47] 2025-11-24 23:34:44,480 [wrapper] apfmon messages muted
[2025-11-25 00:34:47] 2025-11-24 23:34:44,586 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:34:47] 2025-11-24 23:34:44,660 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:34:47]  *** Error codes and diagnostics ***
[2025-11-25 00:34:47]     "exeErrorCode": 0,
[2025-11-25 00:34:47]     "exeErrorDiag": "",
[2025-11-25 00:34:47]     "pilotErrorCode": 0,
[2025-11-25 00:34:47]     "pilotErrorDiag": "",
[2025-11-25 00:34:47]  *** Listing of results directory ***
[2025-11-25 00:34:47] total 1337092
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc    576529 Nov 20 19:04 pilot3.tar.gz
[2025-11-25 00:34:47] -rwx------. 1 boinc boinc     36292 Nov 20 19:58 runpilot2-wrapper.sh
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc      5112 Nov 20 19:58 queuedata.json
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc       100 Nov 24 00:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:34:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 00:32 run_atlas
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc       105 Nov 24 00:32 job.xml
[2025-11-25 00:34:47] -rw-r--r--. 2 boinc boinc 410124524 Nov 24 00:32 EVNT.47493127._000813.pool.root.1
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc      6393 Nov 24 00:32 init_data.xml
[2025-11-25 00:34:47] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:32 start_atlas.sh
[2025-11-25 00:34:47] drwxrwx--x. 2 boinc boinc        68 Nov 24 00:32 shared
[2025-11-25 00:34:47] -rw-r--r--. 2 boinc boinc    590100 Nov 24 00:32 input.tar.gz
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc         0 Nov 24 00:32 boinc_lockfile
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc      2785 Nov 24 00:32 pandaJob.out
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc    989786 Nov 24 00:35 agis_schedconf.cvmfs.json
[2025-11-25 00:34:47] drwx------. 5 boinc boinc      4096 Nov 24 00:35 pilot3
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc       533 Nov 25 00:03 boinc_task_state.xml
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc 927285405 Nov 25 00:30 HITS.47523449._008127.pool.root.1
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc      1033 Nov 25 00:31 memory_monitor_summary.json
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc   1516227 Nov 25 00:31 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc   2481396 Nov 25 00:31 log.47523449._008127.job.log.tgz.1
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc        95 Nov 25 00:33 pilot_heartbeat.json
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc      7943 Nov 25 00:33 heartbeat.json
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc      4884 Nov 25 00:34 pilotlog.txt
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc  11454774 Nov 25 00:34 log.47523449._008127.job.log.1
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc       353 Nov 25 00:34 output.list
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc       620 Nov 25 00:34 runtime_log
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc  13957120 Nov 25 00:34 result.tar.gz
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc      8817 Nov 25 00:34 runtime_log.err
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc       662 Nov 25 00:34 jG8MDmO2Og8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyyGKDmsDq3Jo.diag
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc        29 Nov 25 00:34 wrapper_checkpoint.txt
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc      8192 Nov 25 00:34 boinc_mmap_file
[2025-11-25 00:34:47] -rw-r--r--. 1 boinc boinc     21502 Nov 25 00:34 stderr.txt
[2025-11-25 00:34:47] HITS file was successfully produced:
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc 927285405 Nov 25 00:30 shared/HITS.pool.root.1
[2025-11-25 00:34:47]  *** Contents of shared directory: ***
[2025-11-25 00:34:47] total 1320300
[2025-11-25 00:34:47] -rw-r--r--. 2 boinc boinc 410124524 Nov 24 00:32 ATLAS.root_0
[2025-11-25 00:34:47] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:32 start_atlas.sh
[2025-11-25 00:34:47] -rw-r--r--. 2 boinc boinc    590100 Nov 24 00:32 input.tar.gz
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc 927285405 Nov 25 00:30 HITS.pool.root.1
[2025-11-25 00:34:47] -rw-------. 1 boinc boinc  13957120 Nov 25 00:34 result.tar.gz
00:34:48 (13343): run_atlas exited; CPU time 343954.755536
00:34:48 (13343): called boinc_finish(0)

</stderr_txt>
]]>

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