Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:43:36 (6606): wrapper (7.7.26015): starting
02:43:36 (6606): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:43:36] Arguments: --nthreads 8
[2025-11-24 02:43:36] Threads: 8
[2025-11-24 02:43:36] Checking for CVMFS
[2025-11-24 02:43:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:43:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:43:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:43:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:43:38] 2.11.2.0 22643 142751 138720 153228 1 85 18964256 25165825 4632 130560 2 43727926 99.872 23994574 2215 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:43:38] CVMFS is ok
[2025-11-24 02:43:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:43:38] Checking for apptainer binary...
[2025-11-24 02:43:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:43:38] Running /usr/bin/apptainer --version
[2025-11-24 02:43:38] apptainer version 1.3.2-1.el7
[2025-11-24 02:43:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:43:57] cg-vwn227.simple-grid.lan
[2025-11-24 02:43:57] apptainer works
[2025-11-24 02:43:57] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:43:57] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:43:57] Starting ATLAS job with PandaID=6893879593
[2025-11-24 02:43:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:02:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:02:59] 2025-11-25 01:02:16,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:02:59] 2025-11-25 01:02:16,443 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:02:59] 2025-11-25 01:02:16,445 | INFO     | sum of square deviations: 785172440465.493
[2025-11-25 02:02:59] 2025-11-25 01:02:16,499 | INFO     | sum of deviations: 3865814281075.8696
[2025-11-25 02:02:59] 2025-11-25 01:02:16,499 | INFO     | mean x: 1763990926.2274394
[2025-11-25 02:02:59] 2025-11-25 01:02:16,499 | INFO     | mean y: 2872385.955245781
[2025-11-25 02:02:59] 2025-11-25 01:02:16,500 | INFO     | intersect: -8682176862.914793
[2025-11-25 02:02:59] 2025-11-25 01:02:16,501 | INFO     | chi2: 10.347672180947127
[2025-11-25 02:02:59] 2025-11-25 01:02:16,504 | INFO     | sum of square deviations: 776563663720.4342
[2025-11-25 02:02:59] 2025-11-25 01:02:16,556 | INFO     | sum of deviations: 4308531342030.8657
[2025-11-25 02:02:59] 2025-11-25 01:02:16,556 | INFO     | mean x: 1763990773.7319589
[2025-11-25 02:02:59] 2025-11-25 01:02:16,556 | INFO     | mean y: 2880229.17820324
[2025-11-25 02:02:59] 2025-11-25 01:02:16,556 | INFO     | intersect: -9784095251.062042
[2025-11-25 02:02:59] 2025-11-25 01:02:16,558 | INFO     | chi2: 7.450235905243641
[2025-11-25 02:02:59] 2025-11-25 01:02:16,558 | INFO     | current chi2=7.450235905243641 (change=28.000851061347426 %)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,560 | INFO     | sum of square deviations: 768018050950.3164
[2025-11-25 02:02:59] 2025-11-25 01:02:16,612 | INFO     | sum of deviations: 4443024856663.507
[2025-11-25 02:02:59] 2025-11-25 01:02:16,613 | INFO     | mean x: 1763990621.2365115
[2025-11-25 02:02:59] 2025-11-25 01:02:16,613 | INFO     | mean y: 2882626.8359201774
[2025-11-25 02:02:59] 2025-11-25 01:02:16,613 | INFO     | intersect: -10201895981.397772
[2025-11-25 02:02:59] 2025-11-25 01:02:16,615 | INFO     | chi2: 7.011616129456402
[2025-11-25 02:02:59] 2025-11-25 01:02:16,615 | INFO     | current chi2=7.011616129456402 (change=5.887327345950599 %)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,615 | INFO     | right removable region: 1352
[2025-11-25 02:02:59] 2025-11-25 01:02:16,617 | INFO     | sum of square deviations: 776562643190.4341
[2025-11-25 02:02:59] 2025-11-25 01:02:16,668 | INFO     | sum of deviations: 3276479711744.475
[2025-11-25 02:02:59] 2025-11-25 01:02:16,669 | INFO     | mean x: 1763991078.7319589
[2025-11-25 02:02:59] 2025-11-25 01:02:16,669 | INFO     | mean y: 2882824.4683357878
[2025-11-25 02:02:59] 2025-11-25 01:02:16,669 | INFO     | intersect: -7439763344.317536
[2025-11-25 02:02:59] 2025-11-25 01:02:16,671 | INFO     | chi2: 5.437233331198491
[2025-11-25 02:02:59] 2025-11-25 01:02:16,671 | INFO     | current chi2=5.437233331198491 (change=47.45452662087698 %)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,674 | INFO     | sum of square deviations: 768016092485.7881
[2025-11-25 02:02:59] 2025-11-25 01:02:16,725 | INFO     | sum of deviations: 2952177834543.447
[2025-11-25 02:02:59] 2025-11-25 01:02:16,726 | INFO     | mean x: 1763991231.2357724
[2025-11-25 02:02:59] 2025-11-25 01:02:16,726 | INFO     | mean y: 2888607.0362158166
[2025-11-25 02:02:59] 2025-11-25 01:02:16,726 | INFO     | intersect: -6777719070.503583
[2025-11-25 02:02:59] 2025-11-25 01:02:16,728 | INFO     | chi2: 3.897222836965671
[2025-11-25 02:02:59] 2025-11-25 01:02:16,728 | INFO     | current chi2=3.897222836965671 (change=28.323421130307942 %)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,730 | INFO     | sum of square deviations: 759533216237.8574
[2025-11-25 02:02:59] 2025-11-25 01:02:16,780 | INFO     | sum of deviations: 2857543481152.514
[2025-11-25 02:02:59] 2025-11-25 01:02:16,781 | INFO     | mean x: 1763991383.7329376
[2025-11-25 02:02:59] 2025-11-25 01:02:16,782 | INFO     | mean y: 2890308.0764094954
[2025-11-25 02:02:59] 2025-11-25 01:02:16,782 | INFO     | intersect: -6633662210.8021145
[2025-11-25 02:02:59] 2025-11-25 01:02:16,783 | INFO     | chi2: 3.8413766142862498
[2025-11-25 02:02:59] 2025-11-25 01:02:16,784 | INFO     | current chi2=3.8413766142862498 (change=1.4329748391524508 %)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,784 | INFO     | left removable region: 30
[2025-11-25 02:02:59] 2025-11-25 01:02:16,786 | INFO     | sum of square deviations: 716427873195.3372
[2025-11-25 02:02:59] 2025-11-25 01:02:16,836 | INFO     | sum of deviations: 3188709517316.554
[2025-11-25 02:02:59] 2025-11-25 01:02:16,837 | INFO     | mean x: 1763991505.7352495
[2025-11-25 02:02:59] 2025-11-25 01:02:16,837 | INFO     | mean y: 2905196.938729198
[2025-11-25 02:02:59] 2025-11-25 01:02:16,837 | INFO     | intersect: -7848347822.735323
[2025-11-25 02:02:59] 2025-11-25 01:02:16,839 | INFO     | chi2: 0.36664048044302644
[2025-11-25 02:02:59] 2025-11-25 01:02:16,839 | INFO     | current memory leak: 4.45 B/s (using 1322 data points, chi2=0.37)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,841 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,841 | INFO     | ..............................
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . Timing measurements:
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . get job = 0 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . initial setup = 12 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . payload setup = 163 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . stage-in = 0 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . payload execution = 83303 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . stage-out = 3 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | . log creation = 0 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,842 | INFO     | ..............................
[2025-11-25 02:02:59] 2025-11-25 01:02:16,964 | INFO     | 
[2025-11-25 02:02:59] 2025-11-25 01:02:16,964 | INFO     | job summary report
[2025-11-25 02:02:59] 2025-11-25 01:02:16,964 | INFO     | --------------------------------------------------
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | PanDA job id: 6893879593
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | task id: 47523449
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | errors: (none)
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | pilot state: finished 
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | transexitcode: 0
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | exeerrorcode: 0
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | exeerrordiag: 
[2025-11-25 02:02:59] 2025-11-25 01:02:16,965 | INFO     | exitcode: 0
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | exitmsg: OK
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | cpuconsumptiontime: 340145 s
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | nevents: 1000
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | neventsw: 0
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | pid: 16961
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | pgrp: 16961
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | corecount: 8
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | event service: False
[2025-11-25 02:02:59] 2025-11-25 01:02:16,966 | INFO     | sizes: {0: 2297877, 1: 2298562, 2: 2298761, 13: 2298761, 24: 2298817, 35: 2298845, 45: 2299001, 56: 2299029, 67: 2299057, 78: 2299085, 89: 2299141, 99: 2299449, 10
[2025-11-25 02:02:59] 2025-11-25 01:02:16,967 | INFO     | --------------------------------------------------
[2025-11-25 02:02:59] 2025-11-25 01:02:16,967 | INFO     | 
[2025-11-25 02:02:59] 2025-11-25 01:02:16,967 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-25 02:02:59] 2025-11-25 01:02:17,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,000 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | job 6893879593 has completed (purged errors)
[2025-11-25 02:02:59] 2025-11-25 01:02:17,002 | INFO     | overall cleanup function is called
[2025-11-25 02:02:59] 2025-11-25 01:02:18,018 | INFO     | --- collectZombieJob: --- 10, [16961]
[2025-11-25 02:02:59] 2025-11-25 01:02:18,019 | INFO     | zombie collector waiting for pid 16961
[2025-11-25 02:02:59] 2025-11-25 01:02:18,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:02:59] 2025-11-25 01:02:18,019 | INFO     | collected zombie processes
[2025-11-25 02:02:59] 2025-11-25 01:02:18,019 | INFO     | will attempt to kill all subprocesses of pid=16961
[2025-11-25 02:02:59] 2025-11-25 01:02:18,083 | INFO     | process IDs to be killed: [16961] (in reverse order)
[2025-11-25 02:02:59] 2025-11-25 01:02:18,164 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:02:59] 2025-11-25 01:02:18,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:02:59] 2025-11-25 01:02:18,167 | INFO     | did not find any defunct processes belonging to 16961
[2025-11-25 02:02:59] 2025-11-25 01:02:18,168 | INFO     | did not find any defunct processes belonging to 16961
[2025-11-25 02:02:59] 2025-11-25 01:02:18,171 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:02:59] 2025-11-25 01:02:18,171 | INFO     | ready for new job
[2025-11-25 02:02:59] 2025-11-25 01:02:18,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:02:59] 2025-11-25 01:02:18,178 | INFO     | ***************************************
[2025-11-25 02:02:59] 2025-11-25 01:02:18,178 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:02:59] 2025-11-25 01:02:18,178 | INFO     | ***************************************
[2025-11-25 02:02:59] 2025-11-25 01:02:18,178 | INFO     | 
[2025-11-25 02:02:59] 2025-11-25 01:02:18,179 | INFO     | pilot is running in a VM
[2025-11-25 02:02:59] 2025-11-25 01:02:18,179 | INFO     | architecture information:
[2025-11-25 02:02:59] 2025-11-25 01:02:18,180 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:02:59] 2025-11-25 01:02:18,213 | INFO     | cat /etc/os-release:
[2025-11-25 02:02:59] NAME="CentOS Linux"
[2025-11-25 02:02:59] VERSION="7 (Core)"
[2025-11-25 02:02:59] ID="centos"
[2025-11-25 02:02:59] ID_LIKE="rhel fedora"
[2025-11-25 02:02:59] VERSION_ID="7"
[2025-11-25 02:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:02:59] ANSI_COLOR="0;31"
[2025-11-25 02:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:02:59] HOME_URL="https://www.centos.org/"
[2025-11-25 02:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:02:59] 
[2025-11-25 02:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:02:59] 
[2025-11-25 02:02:59] 2025-11-25 01:02:18,214 | INFO     | ***************************************
[2025-11-25 02:02:59] 2025-11-25 01:02:18,717 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-25 02:02:59] 2025-11-25 01:02:18,745 | INFO     | sufficient remaining disk space (493205061632 B)
[2025-11-25 02:02:59] 2025-11-25 01:02:18,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:02:59] 2025-11-25 01:02:18,746 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:02:59] 2025-11-25 01:02:18,746 | INFO     | update_server=False
[2025-11-25 02:02:59] 2025-11-25 01:02:18,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:02:59] 2025-11-25 01:02:18,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:02:59] 2025-11-25 01:02:18,746 | INFO     | aborting loop
[2025-11-25 02:02:59] 2025-11-25 01:02:18,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:02:59] 2025-11-25 01:02:18,797 | INFO     | all data control threads have been joined
[2025-11-25 02:02:59] 2025-11-25 01:02:19,752 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:19,758 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:19,759 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:19,799 | INFO     | [data] control thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:19,800 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:02:59] 2025-11-25 01:02:19,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:19,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:02:59] 2025-11-25 01:02:20,081 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:20,172 | INFO     | all payload control threads have been joined
[2025-11-25 02:02:59] 2025-11-25 01:02:20,433 | INFO     | all job control threads have been joined
[2025-11-25 02:02:59] 2025-11-25 01:02:20,990 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,049 | INFO     | [job] validate thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,078 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,079 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,178 | INFO     | [payload] control thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,205 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,243 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,439 | INFO     | [job] control thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:21,976 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:23,807 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:02:59] 2025-11-25 01:02:49,223 | INFO     | PID=10422 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 02:02:59] 2025-11-25 01:02:49,224 | INFO     | .. there are 2 such processes running
[2025-11-25 02:02:59] 2025-11-25 01:02:49,225 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:02:59] 2025-11-25 01:02:49,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:02:59] 2025-11-25 01:02:49,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:02:59] 2025-11-25 01:02:51,887 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:02:59] 2025-11-25 01:02:53,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686715565888)>', '<ExcThread(monitor, started 140686150072064)>']
[2025-11-25 02:02:59] 2025-11-25 01:02:54,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:02:59] 2025-11-25 01:02:54,251 | INFO     | [monitor] control thread has ended
[2025-11-25 02:02:59] 2025-11-25 01:02:58,864 | INFO     | all workflow threads have been joined
[2025-11-25 02:02:59] 2025-11-25 01:02:58,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:02:59] 2025-11-25 01:02:58,865 | INFO     | traces error code: 0
[2025-11-25 02:02:59] 2025-11-25 01:02:58,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:02:59] 2025-11-25 01:02:59,063 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:02:59] 2025-11-25 01:02:59,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:02:59] 2025-11-25 01:02:59,076 [wrapper] pilotpid: 10422
[2025-11-25 02:02:59] 2025-11-25 01:02:59,082 [wrapper] Pilot exit status: 0
[2025-11-25 02:02:59] 2025-11-25 01:02:59,116 [wrapper] pandaids: 6893879593
[2025-11-25 02:02:59] 2025-11-25 01:02:59,164 [wrapper] cleanup supervisor_pilot 24888 10423
[2025-11-25 02:02:59] 2025-11-25 01:02:59,173 [wrapper] Test setup, not cleaning
[2025-11-25 02:02:59] 2025-11-25 01:02:59,178 [wrapper] apfmon messages muted
[2025-11-25 02:02:59] 2025-11-25 01:02:59,183 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:02:59] 2025-11-25 01:02:59,188 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:02:59]  *** Error codes and diagnostics ***
[2025-11-25 02:02:59]     "exeErrorCode": 0,
[2025-11-25 02:02:59]     "exeErrorDiag": "",
[2025-11-25 02:02:59]     "pilotErrorCode": 0,
[2025-11-25 02:02:59]     "pilotErrorDiag": "",
[2025-11-25 02:02:59]  *** Listing of results directory ***
[2025-11-25 02:02:59] total 1324308
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc      5112 Nov 20 20:10 queuedata.json
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc    576529 Nov 20 20:10 pilot3.tar.gz
[2025-11-25 02:02:59] -rwx------. 1 boinc boinc     36292 Nov 20 20:13 runpilot2-wrapper.sh
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:02:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:43 run_atlas
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:43 job.xml
[2025-11-25 02:02:59] -rw-r--r--. 2 boinc boinc 409006203 Nov 24 02:43 EVNT.47493127._000819.pool.root.1
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc      6392 Nov 24 02:43 init_data.xml
[2025-11-25 02:02:59] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:43 start_atlas.sh
[2025-11-25 02:02:59] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:43 shared
[2025-11-25 02:02:59] -rw-r--r--. 2 boinc boinc    590098 Nov 24 02:43 input.tar.gz
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:43 boinc_lockfile
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc      2784 Nov 24 02:43 pandaJob.out
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc    989786 Nov 24 02:47 agis_schedconf.cvmfs.json
[2025-11-25 02:02:59] drwx------. 5 boinc boinc      4096 Nov 24 02:47 pilot3
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc       533 Nov 25 01:51 boinc_task_state.xml
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc 916028382 Nov 25 02:01 HITS.47523449._008185.pool.root.1
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc      1034 Nov 25 02:01 memory_monitor_summary.json
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc   1516227 Nov 25 02:02 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc   2460841 Nov 25 02:02 log.47523449._008185.job.log.tgz.1
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc      8634 Nov 25 02:02 heartbeat.json
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc      8192 Nov 25 02:02 boinc_mmap_file
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc        29 Nov 25 02:02 wrapper_checkpoint.txt
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc        95 Nov 25 02:02 pilot_heartbeat.json
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc      4884 Nov 25 02:02 pilotlog.txt
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc  11114466 Nov 25 02:02 log.47523449._008185.job.log.1
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc       353 Nov 25 02:02 output.list
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc       620 Nov 25 02:02 runtime_log
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc  13598720 Nov 25 02:02 result.tar.gz
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc      8817 Nov 25 02:02 runtime_log.err
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc       662 Nov 25 02:02 jmgMDmNHPg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmczGKDmBtg12n.diag
[2025-11-25 02:02:59] -rw-r--r--. 1 boinc boinc     20823 Nov 25 02:02 stderr.txt
[2025-11-25 02:02:59] HITS file was successfully produced:
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc 916028382 Nov 25 02:01 shared/HITS.pool.root.1
[2025-11-25 02:02:59]  *** Contents of shared directory: ***
[2025-11-25 02:02:59] total 1307860
[2025-11-25 02:02:59] -rw-r--r--. 2 boinc boinc 409006203 Nov 24 02:43 ATLAS.root_0
[2025-11-25 02:02:59] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:43 start_atlas.sh
[2025-11-25 02:02:59] -rw-r--r--. 2 boinc boinc    590098 Nov 24 02:43 input.tar.gz
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc 916028382 Nov 25 02:01 HITS.pool.root.1
[2025-11-25 02:02:59] -rw-------. 1 boinc boinc  13598720 Nov 25 02:02 result.tar.gz
02:03:01 (6606): run_atlas exited; CPU time 340355.769425
02:03:01 (6606): called boinc_finish(0)

</stderr_txt>
]]>

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