Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:59:11 (25971): wrapper (7.7.26015): starting
00:59:11 (25971): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:59:11] Arguments: --nthreads 8
[2025-11-21 00:59:11] Threads: 8
[2025-11-21 00:59:11] Checking for CVMFS
[2025-11-21 00:59:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:59:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:59:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:59:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:59:11] 2.11.2.0 2878 49908 81204 153110 2 82 18783284 20275200 1 130560 0 9530115 99.745 3134756 30636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:59:11] CVMFS is ok
[2025-11-21 00:59:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:59:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:59:11] Further information can be found at the LHC@home message board.
[2025-11-21 00:59:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:59:11] Checking for apptainer binary...
[2025-11-21 00:59:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:59:11] Running /usr/bin/apptainer --version
[2025-11-21 00:59:11] apptainer version 1.3.2-1.el7
[2025-11-21 00:59:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:59:13] c-204-27.aglt2.org
[2025-11-21 00:59:13] apptainer works
[2025-11-21 00:59:13] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:59:13] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:59:13] Starting ATLAS job with PandaID=6893879173
[2025-11-21 00:59:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 13:40:15]  *** The last 200 lines of the pilot log: ***
[2025-11-21 13:40:15] 2025-11-21 18:39:43,639 | INFO     | extracted standard info from prmon json
[2025-11-21 13:40:15] 2025-11-21 18:39:43,640 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 13:40:15] 2025-11-21 18:39:43,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 13:40:15] 2025-11-21 18:39:43,653 | INFO     | fitting pss+swap vs Time
[2025-11-21 13:40:15] 2025-11-21 18:39:43,654 | INFO     | sum of square deviations: 129253124044.28381
[2025-11-21 13:40:15] 2025-11-21 18:39:43,667 | INFO     | sum of deviations: 724532489876.7137
[2025-11-21 13:40:15] 2025-11-21 18:39:43,667 | INFO     | mean x: 1763727556.6291833
[2025-11-21 13:40:15] 2025-11-21 18:39:43,667 | INFO     | mean y: 3158482.6921017403
[2025-11-21 13:40:15] 2025-11-21 18:39:43,667 | INFO     | intersect: -9883472324.242182
[2025-11-21 13:40:15] 2025-11-21 18:39:43,668 | INFO     | chi2: 7.132764864628471
[2025-11-21 13:40:15] 2025-11-21 18:39:43,669 | INFO     | sum of square deviations: 126675163239.79097
[2025-11-21 13:40:15] 2025-11-21 18:39:43,680 | INFO     | sum of deviations: 988667196826.7739
[2025-11-21 13:40:15] 2025-11-21 18:39:43,680 | INFO     | mean x: 1763727404.133423
[2025-11-21 13:40:15] 2025-11-21 18:39:43,680 | INFO     | mean y: 3174102.3760107816
[2025-11-21 13:40:15] 2025-11-21 18:39:43,680 | INFO     | intersect: -13762266446.615631
[2025-11-21 13:40:15] 2025-11-21 18:39:43,681 | INFO     | chi2: 4.1258654261155785
[2025-11-21 13:40:15] 2025-11-21 18:39:43,681 | INFO     | current chi2=4.1258654261155785 (change=42.15615537004688 %)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,682 | INFO     | sum of square deviations: 124131714710.27124
[2025-11-21 13:40:15] 2025-11-21 18:39:43,693 | INFO     | sum of deviations: 1144626928734.7156
[2025-11-21 13:40:15] 2025-11-21 18:39:43,693 | INFO     | mean x: 1763727251.6377206
[2025-11-21 13:40:15] 2025-11-21 18:39:43,693 | INFO     | mean y: 3183453.2835820895
[2025-11-21 13:40:15] 2025-11-21 18:39:43,693 | INFO     | intersect: -16260264706.437675
[2025-11-21 13:40:15] 2025-11-21 18:39:43,694 | INFO     | chi2: 3.0290600362977878
[2025-11-21 13:40:15] 2025-11-21 18:39:43,694 | INFO     | current chi2=3.0290600362977878 (change=26.583644315573608 %)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,695 | INFO     | sum of square deviations: 121622501058.50702
[2025-11-21 13:40:15] 2025-11-21 18:39:43,706 | INFO     | sum of deviations: 1212360300950.5469
[2025-11-21 13:40:15] 2025-11-21 18:39:43,706 | INFO     | mean x: 1763727099.1407104
[2025-11-21 13:40:15] 2025-11-21 18:39:43,706 | INFO     | mean y: 3187555.256830601
[2025-11-21 13:40:15] 2025-11-21 18:39:43,706 | INFO     | intersect: -17578038764.70054
[2025-11-21 13:40:15] 2025-11-21 18:39:43,707 | INFO     | chi2: 2.5847937355141317
[2025-11-21 13:40:15] 2025-11-21 18:39:43,707 | INFO     | current chi2=2.5847937355141317 (change=14.666804073208542 %)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,707 | INFO     | right removable region: 731
[2025-11-21 13:40:15] 2025-11-21 18:39:43,708 | INFO     | sum of square deviations: 126674876539.79097
[2025-11-21 13:40:15] 2025-11-21 18:39:43,719 | INFO     | sum of deviations: 494563953207.1741
[2025-11-21 13:40:15] 2025-11-21 18:39:43,720 | INFO     | mean x: 1763727709.133423
[2025-11-21 13:40:15] 2025-11-21 18:39:43,720 | INFO     | mean y: 3172062.3921832885
[2025-11-21 13:40:15] 2025-11-21 18:39:43,720 | INFO     | intersect: -6882772270.350547
[2025-11-21 13:40:15] 2025-11-21 18:39:43,721 | INFO     | chi2: 4.737901215286259
[2025-11-21 13:40:15] 2025-11-21 18:39:43,721 | INFO     | current chi2=4.737901215286259 (change=33.57553059429157 %)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,722 | INFO     | sum of square deviations: 124131231712.81671
[2025-11-21 13:40:15] 2025-11-21 18:39:43,732 | INFO     | sum of deviations: 451957398075.9024
[2025-11-21 13:40:15] 2025-11-21 18:39:43,733 | INFO     | mean x: 1763727861.6350067
[2025-11-21 13:40:15] 2025-11-21 18:39:43,733 | INFO     | mean y: 3174615.2672998644
[2025-11-21 13:40:15] 2025-11-21 18:39:43,733 | INFO     | intersect: -6418495775.49084
[2025-11-21 13:40:15] 2025-11-21 18:39:43,734 | INFO     | chi2: 4.701915473940462
[2025-11-21 13:40:15] 2025-11-21 18:39:43,734 | INFO     | current chi2=4.701915473940462 (change=0.7595291609224303 %)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,734 | INFO     | left removable region: 20
[2025-11-21 13:40:15] 2025-11-21 18:39:43,735 | INFO     | sum of square deviations: 111452330830.97302
[2025-11-21 13:40:15] 2025-11-21 18:39:43,745 | INFO     | sum of deviations: 875695454326.3385
[2025-11-21 13:40:15] 2025-11-21 18:39:43,745 | INFO     | mean x: 1763727678.6441631
[2025-11-21 13:40:15] 2025-11-21 18:39:43,745 | INFO     | mean y: 3208123.2503516176
[2025-11-21 13:40:15] 2025-11-21 18:39:43,745 | INFO     | intersect: -13854629567.022697
[2025-11-21 13:40:15] 2025-11-21 18:39:43,746 | INFO     | chi2: 0.10941372935223441
[2025-11-21 13:40:15] 2025-11-21 18:39:43,746 | INFO     | current memory leak: 7.86 B/s (using 711 data points, chi2=0.11)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,747 | INFO     | could have reported an average CPU frequency of 2178 MHz (28 samples)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,747 | INFO     | ..............................
[2025-11-21 13:40:15] 2025-11-21 18:39:43,747 | INFO     | . Timing measurements:
[2025-11-21 13:40:15] 2025-11-21 18:39:43,747 | INFO     | . get job = 0 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,747 | INFO     | . initial setup = 2 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,748 | INFO     | . payload setup = 8 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,748 | INFO     | . stage-in = 0 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,748 | INFO     | . payload execution = 45571 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,748 | INFO     | . stage-out = 3 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,748 | INFO     | . log creation = 0 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,748 | INFO     | ..............................
[2025-11-21 13:40:15] 2025-11-21 18:39:43,842 | INFO     | 
[2025-11-21 13:40:15] 2025-11-21 18:39:43,843 | INFO     | job summary report
[2025-11-21 13:40:15] 2025-11-21 18:39:43,843 | INFO     | --------------------------------------------------
[2025-11-21 13:40:15] 2025-11-21 18:39:43,843 | INFO     | PanDA job id: 6893879173
[2025-11-21 13:40:15] 2025-11-21 18:39:43,843 | INFO     | task id: 47523449
[2025-11-21 13:40:15] 2025-11-21 18:39:43,844 | INFO     | errors: (none)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,844 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 13:40:15] 2025-11-21 18:39:43,844 | INFO     | pilot state: finished 
[2025-11-21 13:40:15] 2025-11-21 18:39:43,844 | INFO     | transexitcode: 0
[2025-11-21 13:40:15] 2025-11-21 18:39:43,844 | INFO     | exeerrorcode: 0
[2025-11-21 13:40:15] 2025-11-21 18:39:43,844 | INFO     | exeerrordiag: 
[2025-11-21 13:40:15] 2025-11-21 18:39:43,845 | INFO     | exitcode: 0
[2025-11-21 13:40:15] 2025-11-21 18:39:43,845 | INFO     | exitmsg: OK
[2025-11-21 13:40:15] 2025-11-21 18:39:43,845 | INFO     | cpuconsumptiontime: 352032 s
[2025-11-21 13:40:15] 2025-11-21 18:39:43,845 | INFO     | nevents: 1000
[2025-11-21 13:40:15] 2025-11-21 18:39:43,845 | INFO     | neventsw: 0
[2025-11-21 13:40:15] 2025-11-21 18:39:43,845 | INFO     | pid: 3708
[2025-11-21 13:40:15] 2025-11-21 18:39:43,846 | INFO     | pgrp: 3708
[2025-11-21 13:40:15] 2025-11-21 18:39:43,846 | INFO     | corecount: 8
[2025-11-21 13:40:15] 2025-11-21 18:39:43,846 | INFO     | event service: False
[2025-11-21 13:40:15] 2025-11-21 18:39:43,846 | INFO     | sizes: {0: 2298750, 6: 2299012, 11: 2299040, 45584: 2345186, 45588: 2354236, 45595: 2354426}
[2025-11-21 13:40:15] 2025-11-21 18:39:43,846 | INFO     | --------------------------------------------------
[2025-11-21 13:40:15] 2025-11-21 18:39:43,847 | INFO     | 
[2025-11-21 13:40:15] 2025-11-21 18:39:43,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 13:40:15] 2025-11-21 18:39:43,877 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 13:40:15] 2025-11-21 18:39:43,881 | INFO     | job 6893879173 has completed (purged errors)
[2025-11-21 13:40:15] 2025-11-21 18:39:43,881 | INFO     | overall cleanup function is called
[2025-11-21 13:40:15] 2025-11-21 18:39:44,895 | INFO     | --- collectZombieJob: --- 10, [3708]
[2025-11-21 13:40:15] 2025-11-21 18:39:44,895 | INFO     | zombie collector waiting for pid 3708
[2025-11-21 13:40:15] 2025-11-21 18:39:44,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 13:40:15] 2025-11-21 18:39:44,896 | INFO     | collected zombie processes
[2025-11-21 13:40:15] 2025-11-21 18:39:44,896 | INFO     | will attempt to kill all subprocesses of pid=3708
[2025-11-21 13:40:15] 2025-11-21 18:39:44,989 | INFO     | process IDs to be killed: [3708] (in reverse order)
[2025-11-21 13:40:15] 2025-11-21 18:39:45,047 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 13:40:15] 2025-11-21 18:39:45,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 13:40:15] 2025-11-21 18:39:45,052 | INFO     | did not find any defunct processes belonging to 3708
[2025-11-21 13:40:15] 2025-11-21 18:39:45,055 | INFO     | did not find any defunct processes belonging to 3708
[2025-11-21 13:40:15] 2025-11-21 18:39:45,058 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 13:40:15] 2025-11-21 18:39:45,058 | INFO     | ready for new job
[2025-11-21 13:40:15] 2025-11-21 18:39:45,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 13:40:15] 2025-11-21 18:39:45,062 | INFO     | ***************************************
[2025-11-21 13:40:15] 2025-11-21 18:39:45,062 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 13:40:15] 2025-11-21 18:39:45,062 | INFO     | ***************************************
[2025-11-21 13:40:15] 2025-11-21 18:39:45,062 | INFO     | 
[2025-11-21 13:40:15] 2025-11-21 18:39:45,063 | INFO     | architecture information:
[2025-11-21 13:40:15] 2025-11-21 18:39:45,064 | INFO     | executing command: cat /etc/os-release
[2025-11-21 13:40:15] 2025-11-21 18:39:45,084 | INFO     | cat /etc/os-release:
[2025-11-21 13:40:15] NAME="CentOS Linux"
[2025-11-21 13:40:15] VERSION="7 (Core)"
[2025-11-21 13:40:15] ID="centos"
[2025-11-21 13:40:15] ID_LIKE="rhel fedora"
[2025-11-21 13:40:15] VERSION_ID="7"
[2025-11-21 13:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 13:40:15] ANSI_COLOR="0;31"
[2025-11-21 13:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 13:40:15] HOME_URL="https://www.centos.org/"
[2025-11-21 13:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 13:40:15] 
[2025-11-21 13:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 13:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 13:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 13:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 13:40:15] 
[2025-11-21 13:40:15] 2025-11-21 18:39:45,084 | INFO     | ***************************************
[2025-11-21 13:40:15] 2025-11-21 18:39:45,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 13:40:15] 2025-11-21 18:39:45,658 | INFO     | sufficient remaining disk space (17421041664 B)
[2025-11-21 13:40:15] 2025-11-21 18:39:45,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 13:40:15] 2025-11-21 18:39:45,659 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 13:40:15] 2025-11-21 18:39:45,659 | INFO     | update_server=False
[2025-11-21 13:40:15] 2025-11-21 18:39:45,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 13:40:15] 2025-11-21 18:39:45,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:40:15] 2025-11-21 18:39:45,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:40:15] 2025-11-21 18:39:45,661 | INFO     | aborting loop
[2025-11-21 13:40:15] 2025-11-21 18:39:46,273 | INFO     | all payload control threads have been joined
[2025-11-21 13:40:15] 2025-11-21 18:39:46,405 | INFO     | [monitor] cgroup control has ended
[2025-11-21 13:40:15] 2025-11-21 18:39:46,631 | INFO     | all data control threads have been joined
[2025-11-21 13:40:15] 2025-11-21 18:39:46,661 | INFO     | [job] retrieve thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:46,664 | INFO     | [job] queue monitor thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:46,665 | INFO     | [job] job monitor thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:46,686 | INFO     | all job control threads have been joined
[2025-11-21 13:40:15] 2025-11-21 18:39:46,699 | INFO     | [payload] failed_post thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:46,731 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 13:40:15] 2025-11-21 18:39:47,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 13:40:15] 2025-11-21 18:39:47,168 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,279 | INFO     | [payload] control thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,634 | INFO     | [data] control thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,637 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,665 | INFO     | [job] validate thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:47,693 | INFO     | [job] control thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:48,094 | INFO     | [data] copytool_in thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:48,153 | INFO     | [payload] validate_post thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:49,072 | INFO     | [data] copytool_out thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:51,162 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 13:40:15] 2025-11-21 18:39:51,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717724604224)>', '<ExcThread(monitor, started 140717137581824)>']
[2025-11-21 13:40:15] 2025-11-21 18:39:56,807 | INFO     | all workflow threads have been joined
[2025-11-21 13:40:15] 2025-11-21 18:39:56,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 13:40:15] 2025-11-21 18:39:56,808 | INFO     | traces error code: 0
[2025-11-21 13:40:15] 2025-11-21 18:39:56,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 13:40:15] 2025-11-21 18:40:15,302 | INFO     | PID=29649 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 13:40:15] 2025-11-21 18:40:15,303 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 13:40:15] 2025-11-21 18:40:15,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 13:40:15] 2025-11-21 18:40:15,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 13:40:15] 2025-11-21 18:40:15,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 13:40:15] 2025-11-21 18:40:15,303 | INFO     | [monitor] control thread has ended
[2025-11-21 13:40:15] 2025-11-21 18:40:15,417 [wrapper] ==== pilot stdout END ====
[2025-11-21 13:40:15] 2025-11-21 18:40:15,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 13:40:15] 2025-11-21 18:40:15,426 [wrapper] pilotpid: 29649
[2025-11-21 13:40:15] 2025-11-21 18:40:15,430 [wrapper] Pilot exit status: 0
[2025-11-21 13:40:15] 2025-11-21 18:40:15,446 [wrapper] pandaids: 6893879173
[2025-11-21 13:40:15] 2025-11-21 18:40:15,490 [wrapper] cleanup supervisor_pilot  9487 29650
[2025-11-21 13:40:15] 2025-11-21 18:40:15,495 [wrapper] Test setup, not cleaning
[2025-11-21 13:40:15] 2025-11-21 18:40:15,500 [wrapper] apfmon messages muted
[2025-11-21 13:40:15] 2025-11-21 18:40:15,505 [wrapper] ==== wrapper stdout END ====
[2025-11-21 13:40:15] 2025-11-21 18:40:15,509 [wrapper] ==== wrapper stderr END ====
[2025-11-21 13:40:15]  *** Error codes and diagnostics ***
[2025-11-21 13:40:15]     "exeErrorCode": 0,
[2025-11-21 13:40:15]     "exeErrorDiag": "",
[2025-11-21 13:40:15]     "pilotErrorCode": 0,
[2025-11-21 13:40:15]     "pilotErrorDiag": "",
[2025-11-21 13:40:15]  *** Listing of results directory ***
[2025-11-21 13:40:15] total 1327824
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-21 13:40:15] -rwx------ 1 boincer umatlas     36292 Nov 20 14:01 runpilot2-wrapper.sh
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 14:01 queuedata.json
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas       100 Nov 21 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 13:40:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 00:59 run_atlas
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas       105 Nov 21 00:59 job.xml
[2025-11-21 13:40:15] -rw-r--r-- 2 boincer umatlas 411008569 Nov 21 00:59 EVNT.47493127._000816.pool.root.1
[2025-11-21 13:40:15] drwxrwx--x 2 boincer umatlas      4096 Nov 21 00:59 shared
[2025-11-21 13:40:15] -rw-r--r-- 2 boincer umatlas    590098 Nov 21 00:59 input.tar.gz
[2025-11-21 13:40:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 00:59 start_atlas.sh
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas         0 Nov 21 00:59 boinc_lockfile
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas      2782 Nov 21 00:59 pandaJob.out
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas        57 Nov 21 00:59 setup.sh.local
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas    989817 Nov 21 00:59 agis_schedconf.cvmfs.json
[2025-11-21 13:40:15] drwx------ 5 boincer umatlas      4096 Nov 21 00:59 pilot3
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas       533 Nov 21 13:25 boinc_task_state.xml
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 13:38 init_data.xml
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas 928255916 Nov 21 13:38 HITS.47523449._008151.pool.root.1
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas      1063 Nov 21 13:39 memory_monitor_summary.json
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas   1526164 Nov 21 13:39 agis_ddmendpoints.agis.ALL.json
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas   1987296 Nov 21 13:39 log.47523449._008151.job.log.tgz.1
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas      8671 Nov 21 13:39 heartbeat.json
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas        29 Nov 21 13:39 wrapper_checkpoint.txt
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas        95 Nov 21 13:40 pilot_heartbeat.json
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas       745 Nov 21 13:40 pilotlog.txt
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas   6266201 Nov 21 13:40 log.47523449._008151.job.log.1
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 13:40 boinc_mmap_file
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas       353 Nov 21 13:40 output.list
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas       620 Nov 21 13:40 runtime_log
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas   8273920 Nov 21 13:40 result.tar.gz
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 13:40 runtime_log.err
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas       668 Nov 21 13:40 HV2MDmv5Og8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3yGKDmbi9gfm.diag
[2025-11-21 13:40:15] -rw-r--r-- 1 boincer umatlas     21066 Nov 21 13:40 stderr.txt
[2025-11-21 13:40:15] HITS file was successfully produced:
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas 928255916 Nov 21 13:38 shared/HITS.pool.root.1
[2025-11-21 13:40:15]  *** Contents of shared directory: ***
[2025-11-21 13:40:15] total 1316560
[2025-11-21 13:40:15] -rw-r--r-- 2 boincer umatlas 411008569 Nov 21 00:59 ATLAS.root_0
[2025-11-21 13:40:15] -rw-r--r-- 2 boincer umatlas    590098 Nov 21 00:59 input.tar.gz
[2025-11-21 13:40:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 00:59 start_atlas.sh
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas 928255916 Nov 21 13:38 HITS.pool.root.1
[2025-11-21 13:40:15] -rw------- 1 boincer umatlas   8273920 Nov 21 13:40 result.tar.gz
13:40:17 (25971): run_atlas exited; CPU time 349508.160034
13:40:17 (25971): called boinc_finish(0)

</stderr_txt>
]]>

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