Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:07:16 (554448): wrapper (7.7.26015): starting
15:07:16 (554448): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 15:07:16] Arguments: --nthreads 4
[2025-11-24 15:07:16] Threads: 4
[2025-11-24 15:07:16] Checking for CVMFS
[2025-11-24 15:07:16] No cvmfs_config command found, will try listing directly
[2025-11-24 15:07:16] CVMFS is ok
[2025-11-24 15:07:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:07:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:07:16] Further information can be found at the LHC@home message board.
[2025-11-24 15:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:07:16] Checking for apptainer binary...
[2025-11-24 15:07:16] which: no apptainer in ((null))
[2025-11-24 15:07:16] apptainer is not installed, using version from CVMFS
[2025-11-24 15:07:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:07:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-24 15:07:16] apptainer works
[2025-11-24 15:07:16] Set ATHENA_PROC_NUMBER=4
[2025-11-24 15:07:16] Set ATHENA_CORE_NUMBER=4
[2025-11-24 15:07:16] Starting ATLAS job with PandaID=6893864177
[2025-11-24 15:07:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:27:36]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:27:36] 2025-11-25 06:25:23,953 | INFO     | time since job start (58670s) is within the limit (172800.0s)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,494 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 07:27:36] 2025-11-25 06:25:25,522 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2689.544796875001
[2025-11-25 07:27:36] 2025-11-25 06:25:25,550 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6893864177/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,551 | INFO     | extracted standard info from prmon json
[2025-11-25 07:27:36] 2025-11-25 06:25:25,552 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 07:27:36] 2025-11-25 06:25:25,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:27:36] 2025-11-25 06:25:25,569 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:27:36] 2025-11-25 06:25:25,569 | INFO     | monitor loop #3935: job 0:6893864177 is in state 'finished'
[2025-11-25 07:27:36] 2025-11-25 06:25:25,571 | INFO     | sum of square deviations: 275199789317.99603
[2025-11-25 07:27:36] 2025-11-25 06:25:25,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,596 | INFO     | sum of deviations: 803415021644.2308
[2025-11-25 07:27:36] 2025-11-25 06:25:25,596 | INFO     | mean x: 1764022569.0020812
[2025-11-25 07:27:36] 2025-11-25 06:25:25,596 | INFO     | mean y: 2271177.8844953175
[2025-11-25 07:27:36] 2025-11-25 06:25:25,597 | INFO     | intersect: -5147595520.661853
[2025-11-25 07:27:36] 2025-11-25 06:25:25,598 | INFO     | chi2: 3.886590834094302
[2025-11-25 07:27:36] 2025-11-25 06:25:25,599 | INFO     | sum of square deviations: 270926574922.99576
[2025-11-25 07:27:36] 2025-11-25 06:25:25,623 | INFO     | sum of deviations: 964210680443.2919
[2025-11-25 07:27:36] 2025-11-25 06:25:25,624 | INFO     | mean x: 1764022416.5020921
[2025-11-25 07:27:36] 2025-11-25 06:25:25,624 | INFO     | mean y: 2276910.6035564854
[2025-11-25 07:27:36] 2025-11-25 06:25:25,624 | INFO     | intersect: -6275768183.408127
[2025-11-25 07:27:36] 2025-11-25 06:25:25,625 | INFO     | chi2: 2.3820831221935928
[2025-11-25 07:27:36] 2025-11-25 06:25:25,625 | INFO     | current chi2=2.3820831221935928 (change=38.71021612830276 %)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,626 | INFO     | sum of square deviations: 266697826477.9959
[2025-11-25 07:27:36] 2025-11-25 06:25:25,649 | INFO     | sum of deviations: 1019491834442.1224
[2025-11-25 07:27:36] 2025-11-25 06:25:25,650 | INFO     | mean x: 1764022264.002103
[2025-11-25 07:27:36] 2025-11-25 06:25:25,650 | INFO     | mean y: 2278901.939011567
[2025-11-25 07:27:36] 2025-11-25 06:25:25,650 | INFO     | intersect: -6740956757.961009
[2025-11-25 07:27:36] 2025-11-25 06:25:25,651 | INFO     | chi2: 2.155304900986498
[2025-11-25 07:27:36] 2025-11-25 06:25:25,651 | INFO     | current chi2=2.155304900986498 (change=9.52016405700659 %)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,651 | INFO     | right removable region: 950
[2025-11-25 07:27:36] 2025-11-25 06:25:25,652 | INFO     | sum of square deviations: 270926573702.9958
[2025-11-25 07:27:36] 2025-11-25 06:25:25,678 | INFO     | sum of deviations: 615551899584.0161
[2025-11-25 07:27:36] 2025-11-25 06:25:25,678 | INFO     | mean x: 1764022721.5020921
[2025-11-25 07:27:36] 2025-11-25 06:25:25,678 | INFO     | mean y: 2277871.4916317994
[2025-11-25 07:27:36] 2025-11-25 06:25:25,678 | INFO     | intersect: -4005625533.0682425
[2025-11-25 07:27:36] 2025-11-25 06:25:25,679 | INFO     | chi2: 1.857925004984262
[2025-11-25 07:27:36] 2025-11-25 06:25:25,679 | INFO     | current chi2=1.857925004984262 (change=52.19653716346973 %)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,680 | INFO     | sum of square deviations: 266697824037.9959
[2025-11-25 07:27:36] 2025-11-25 06:25:25,703 | INFO     | sum of deviations: 578547522608.8805
[2025-11-25 07:27:36] 2025-11-25 06:25:25,704 | INFO     | mean x: 1764022874.002103
[2025-11-25 07:27:36] 2025-11-25 06:25:25,704 | INFO     | mean y: 2279205.559411146
[2025-11-25 07:27:36] 2025-11-25 06:25:25,704 | INFO     | intersect: -3824415171.346774
[2025-11-25 07:27:36] 2025-11-25 06:25:25,705 | INFO     | chi2: 1.8232755066027813
[2025-11-25 07:27:36] 2025-11-25 06:25:25,705 | INFO     | current chi2=1.8232755066027813 (change=1.8649567818144623 %)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,705 | INFO     | left removable region: 20
[2025-11-25 07:27:36] 2025-11-25 06:25:25,706 | INFO     | sum of square deviations: 249417397832.49496
[2025-11-25 07:27:36] 2025-11-25 06:25:25,726 | INFO     | sum of deviations: 740425338809.1987
[2025-11-25 07:27:36] 2025-11-25 06:25:25,726 | INFO     | mean x: 1764022843.5021505
[2025-11-25 07:27:36] 2025-11-25 06:25:25,726 | INFO     | mean y: 2288925.6505376343
[2025-11-25 07:27:36] 2025-11-25 06:25:25,726 | INFO     | intersect: -5234423600.892706
[2025-11-25 07:27:36] 2025-11-25 06:25:25,728 | INFO     | chi2: 0.06919158436284173
[2025-11-25 07:27:36] 2025-11-25 06:25:25,728 | INFO     | current memory leak: 2.97 B/s (using 930 data points, chi2=0.07)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,730 | INFO     | could have reported an average CPU frequency of 2666 MHz (36 samples)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,730 | INFO     | ..............................
[2025-11-25 07:27:36] 2025-11-25 06:25:25,730 | INFO     | . Timing measurements:
[2025-11-25 07:27:36] 2025-11-25 06:25:25,730 | INFO     | . get job = 0 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,730 | INFO     | . initial setup = 1 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,730 | INFO     | . payload setup = 9 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,731 | INFO     | . stage-in = 0 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,731 | INFO     | . payload execution = 58628 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,731 | INFO     | . stage-out = 2 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,731 | INFO     | . log creation = 0 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,731 | INFO     | ..............................
[2025-11-25 07:27:36] 2025-11-25 06:25:25,848 | INFO     | 
[2025-11-25 07:27:36] 2025-11-25 06:25:25,848 | INFO     | job summary report
[2025-11-25 07:27:36] 2025-11-25 06:25:25,848 | INFO     | --------------------------------------------------
[2025-11-25 07:27:36] 2025-11-25 06:25:25,848 | INFO     | PanDA job id: 6893864177
[2025-11-25 07:27:36] 2025-11-25 06:25:25,848 | INFO     | task id: 47523449
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | errors: (none)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | pilot state: finished 
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | transexitcode: 0
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | exeerrorcode: 0
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | exeerrordiag: 
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | exitcode: 0
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | exitmsg: OK
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | cpuconsumptiontime: 231572 s
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | nevents: 1000
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | neventsw: 0
[2025-11-25 07:27:36] 2025-11-25 06:25:25,849 | INFO     | pid: 569352
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | pgrp: 569352
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | corecount: 4
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | event service: False
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | sizes: {0: 2284322, 8: 2284584, 11: 2284612, 58641: 2339316, 58642: 2339315, 58644: 2348389, 58647: 2348573, 58654: 2348819}
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | --------------------------------------------------
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | 
[2025-11-25 07:27:36] 2025-11-25 06:25:25,850 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:27:36] 2025-11-25 06:25:25,885 | INFO     | job 6893864177 has completed (purged errors)
[2025-11-25 07:27:36] 2025-11-25 06:25:25,886 | INFO     | overall cleanup function is called
[2025-11-25 07:27:36] 2025-11-25 06:25:26,903 | INFO     | --- collectZombieJob: --- 10, [569352]
[2025-11-25 07:27:36] 2025-11-25 06:25:26,903 | INFO     | zombie collector waiting for pid 569352
[2025-11-25 07:27:36] 2025-11-25 06:25:26,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:27:36] 2025-11-25 06:25:26,904 | INFO     | collected zombie processes
[2025-11-25 07:27:36] 2025-11-25 06:25:26,904 | INFO     | will attempt to kill all subprocesses of pid=569352
[2025-11-25 07:27:36] 2025-11-25 06:25:27,725 | INFO     | process IDs to be killed: [569352] (in reverse order)
[2025-11-25 07:27:36] 2025-11-25 06:25:27,974 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:27:36] 2025-11-25 06:25:27,974 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:27:36] 2025-11-25 06:25:28,007 | INFO     | did not find any defunct processes belonging to 569352
[2025-11-25 07:27:36] 2025-11-25 06:25:28,041 | INFO     | did not find any defunct processes belonging to 569352
[2025-11-25 07:27:36] 2025-11-25 06:25:28,042 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:27:36] 2025-11-25 06:25:28,042 | INFO     | ready for new job
[2025-11-25 07:27:36] 2025-11-25 06:25:28,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:27:36] 2025-11-25 06:25:28,049 | INFO     | ***************************************
[2025-11-25 07:27:36] 2025-11-25 06:25:28,049 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:27:36] 2025-11-25 06:25:28,050 | INFO     | ***************************************
[2025-11-25 07:27:36] 2025-11-25 06:25:28,050 | INFO     | 
[2025-11-25 07:27:36] 2025-11-25 06:25:28,058 | INFO     | architecture information:
[2025-11-25 07:27:36] 2025-11-25 06:25:28,059 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:27:36] 2025-11-25 06:25:28,081 | INFO     | cat /etc/os-release:
[2025-11-25 07:27:36] NAME="CentOS Linux"
[2025-11-25 07:27:36] VERSION="7 (Core)"
[2025-11-25 07:27:36] ID="centos"
[2025-11-25 07:27:36] ID_LIKE="rhel fedora"
[2025-11-25 07:27:36] VERSION_ID="7"
[2025-11-25 07:27:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:27:36] ANSI_COLOR="0;31"
[2025-11-25 07:27:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:27:36] HOME_URL="https://www.centos.org/"
[2025-11-25 07:27:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:27:36] 
[2025-11-25 07:27:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:27:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:27:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:27:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:27:36] 
[2025-11-25 07:27:36] 2025-11-25 06:25:28,082 | INFO     | ***************************************
[2025-11-25 07:27:36] 2025-11-25 06:25:28,585 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-11-25 07:27:36] 2025-11-25 06:25:28,607 | INFO     | sufficient remaining disk space (3265854963712 B)
[2025-11-25 07:27:36] 2025-11-25 06:25:28,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:27:36] 2025-11-25 06:25:28,607 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:27:36] 2025-11-25 06:25:28,607 | INFO     | update_server=False
[2025-11-25 07:27:36] 2025-11-25 06:25:28,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:27:36] 2025-11-25 06:25:28,736 | INFO     | all data control threads have been joined
[2025-11-25 07:27:36] 2025-11-25 06:25:28,837 | INFO     | all payload control threads have been joined
[2025-11-25 07:27:36] 2025-11-25 06:25:29,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:27:36] 2025-11-25 06:25:29,090 | INFO     | aborting loop
[2025-11-25 07:27:36] 2025-11-25 06:25:29,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:27:36] 2025-11-25 06:25:29,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:27:36] 2025-11-25 06:25:29,613 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:29,742 | INFO     | [data] control thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:29,843 | INFO     | [payload] control thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:29,939 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,078 | INFO     | [job] validate thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,095 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,231 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,243 | INFO     | all job control threads have been joined
[2025-11-25 07:27:36] 2025-11-25 06:25:30,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,401 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,443 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,602 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:30,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:27:36] 2025-11-25 06:25:31,141 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:31,142 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:31,248 | INFO     | [job] control thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:31,862 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:33,257 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:27:36] 2025-11-25 06:25:57,870 | INFO     | PID=558889 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:27:36] 2025-11-25 06:25:57,870 | INFO     | .. there are 5 such processes running
[2025-11-25 07:27:36] 2025-11-25 06:25:57,871 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:27:36] 2025-11-25 06:25:57,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:27:36] 2025-11-25 06:25:57,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:27:36] 2025-11-25 06:26:09,980 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:27:36] 2025-11-25 06:26:10,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23139581343552)>', '<ExcThread(monitor, started 23139345995520)>']
[2025-11-25 07:27:36] 2025-11-25 06:26:10,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:27:36] 2025-11-25 06:26:10,936 | INFO     | [monitor] control thread has ended
[2025-11-25 07:27:36] 2025-11-25 06:26:15,742 | INFO     | all workflow threads have been joined
[2025-11-25 07:27:36] 2025-11-25 06:26:15,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:27:36] 2025-11-25 06:26:15,743 | INFO     | traces error code: 0
[2025-11-25 07:27:36] 2025-11-25 06:26:15,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:27:36] 2025-11-25 06:26:15,883 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:27:36] 2025-11-25 06:26:15,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:27:36] 2025-11-25 06:26:15,890 [wrapper] pilotpid: 558889
[2025-11-25 07:27:36] 2025-11-25 06:26:15,894 [wrapper] Pilot exit status: 0
[2025-11-25 07:27:36] 2025-11-25 06:26:15,910 [wrapper] pandaids: 6893864177
[2025-11-25 07:27:36] 2025-11-25 06:26:16,095 [wrapper] cleanup supervisor_pilot 1993995 558890
[2025-11-25 07:27:36] 2025-11-25 06:26:16,100 [wrapper] Test setup, not cleaning
[2025-11-25 07:27:36] 2025-11-25 06:26:16,104 [wrapper] apfmon messages muted
[2025-11-25 07:27:36] 2025-11-25 06:26:16,108 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:27:36] 2025-11-25 06:26:16,112 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:27:36]  *** Error codes and diagnostics ***
[2025-11-25 07:27:36]     "exeErrorCode": 0,
[2025-11-25 07:27:36]     "exeErrorDiag": "",
[2025-11-25 07:27:36]     "pilotErrorCode": 0,
[2025-11-25 07:27:36]     "pilotErrorDiag": "",
[2025-11-25 07:27:36]  *** Listing of results directory ***
[2025-11-25 07:27:36] total 1325240
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:20 queuedata.json
[2025-11-25 07:27:36] -rwx------ 1 boinc boinc     36292 Nov 20 15:21 runpilot2-wrapper.sh
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc       100 Nov 24 15:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:27:36] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 15:07 run_atlas
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc       105 Nov 24 15:07 job.xml
[2025-11-25 07:27:36] -rw-r--r-- 2 boinc boinc 409794560 Nov 24 15:07 EVNT.47493127._000600.pool.root.1
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc      6689 Nov 24 15:07 init_data.xml
[2025-11-25 07:27:36] -rw-r--r-- 2 boinc boinc     15847 Nov 24 15:07 start_atlas.sh
[2025-11-25 07:27:36] drwxrwx--x 2 boinc boinc      4096 Nov 24 15:07 shared
[2025-11-25 07:27:36] -rw-r--r-- 2 boinc boinc    590102 Nov 24 15:07 input.tar.gz
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc         0 Nov 24 15:07 boinc_lockfile
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc      2786 Nov 24 15:07 pandaJob.out
[2025-11-25 07:27:36] -rw------- 1 boinc boinc    988280 Nov 24 15:07 agis_schedconf.cvmfs.json
[2025-11-25 07:27:36] drwx------ 5 boinc boinc      4096 Nov 24 15:07 pilot3
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc       532 Nov 25 07:15 boinc_task_state.xml
[2025-11-25 07:27:36] -rw------- 1 boinc boinc 923775563 Nov 25 07:24 HITS.47523449._005998.pool.root.1
[2025-11-25 07:27:36] -rw------- 1 boinc boinc      1041 Nov 25 07:25 memory_monitor_summary.json
[2025-11-25 07:27:36] -rw------- 1 boinc boinc   1516227 Nov 25 07:25 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:27:36] -rw------- 1 boinc boinc   1710365 Nov 25 07:25 log.47523449._005998.job.log.tgz.1
[2025-11-25 07:27:36] -rw------- 1 boinc boinc      8610 Nov 25 07:25 heartbeat.json
[2025-11-25 07:27:36] -rw------- 1 boinc boinc        95 Nov 25 07:25 pilot_heartbeat.json
[2025-11-25 07:27:36] -rw------- 1 boinc boinc      4835 Nov 25 07:26 pilotlog.txt
[2025-11-25 07:27:36] -rw------- 1 boinc boinc   8067445 Nov 25 07:26 log.47523449._005998.job.log.1
[2025-11-25 07:27:36] -rw------- 1 boinc boinc       353 Nov 25 07:26 output.list
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc       620 Nov 25 07:26 runtime_log
[2025-11-25 07:27:36] -rw------- 1 boinc boinc   9799680 Nov 25 07:26 result.tar.gz
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc      9223 Nov 25 07:26 runtime_log.err
[2025-11-25 07:27:36] -rw------- 1 boinc boinc       670 Nov 25 07:26 qOyNDmNiKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzmGKDmKJc1im.diag
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc        28 Nov 25 07:27 wrapper_checkpoint.txt
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc      8192 Nov 25 07:27 boinc_mmap_file
[2025-11-25 07:27:36] -rw-r--r-- 1 boinc boinc     21117 Nov 25 07:27 stderr.txt
[2025-11-25 07:27:36] HITS file was successfully produced:
[2025-11-25 07:27:36] -rw------- 1 boinc boinc 923775563 Nov 25 07:24 shared/HITS.pool.root.1
[2025-11-25 07:27:36]  *** Contents of shared directory: ***
[2025-11-25 07:27:36] total 1312496
[2025-11-25 07:27:36] -rw-r--r-- 2 boinc boinc 409794560 Nov 24 15:07 ATLAS.root_0
[2025-11-25 07:27:36] -rw-r--r-- 2 boinc boinc     15847 Nov 24 15:07 start_atlas.sh
[2025-11-25 07:27:36] -rw-r--r-- 2 boinc boinc    590102 Nov 24 15:07 input.tar.gz
[2025-11-25 07:27:36] -rw------- 1 boinc boinc 923775563 Nov 25 07:24 HITS.pool.root.1
[2025-11-25 07:27:36] -rw------- 1 boinc boinc   9799680 Nov 25 07:26 result.tar.gz
07:27:37 (554448): run_atlas exited; CPU time 234602.356104
07:27:37 (554448): called boinc_finish(0)

</stderr_txt>
]]>

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