Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:31 (16207): wrapper (7.7.26015): starting
02:12:31 (16207): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:12:31] Arguments: --nthreads 8
[2025-11-24 02:12:31] Threads: 8
[2025-11-24 02:12:31] Checking for CVMFS
[2025-11-24 02:12:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:12:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:12:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:12:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:12:33] 2.11.2.0 1327 281779 141280 153227 2 85 20838860 25165825 4632 130560 18 147233381 99.902 73724807 3182 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:12:33] CVMFS is ok
[2025-11-24 02:12:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:12:33] Checking for apptainer binary...
[2025-11-24 02:12:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:12:33] Running /usr/bin/apptainer --version
[2025-11-24 02:12:33] apptainer version 1.3.2-1.el7
[2025-11-24 02:12:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:13:03] cg-vwn489.simple-grid.lan
[2025-11-24 02:13:03] apptainer works
[2025-11-24 02:13:03] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:13:03] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:13:03] Starting ATLAS job with PandaID=6892534793
[2025-11-24 02:13:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:18:19]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:18:19] 2025-11-24 20:16:57,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:18:19] 2025-11-24 20:16:59,046 | INFO     | time since job start (68391s) is within the limit (172800.0s)
[2025-11-24 21:18:19] 2025-11-24 20:16:59,836 | INFO     | monitor loop #4601: job 0:6892534793 is in state 'finished'
[2025-11-24 21:18:19] 2025-11-24 20:16:59,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:18:19] 2025-11-24 20:17:01,053 | INFO     | time since job start (68393s) is within the limit (172800.0s)
[2025-11-24 21:18:19] 2025-11-24 20:17:02,343 | INFO     | monitor loop #4602: job 0:6892534793 is in state 'finished'
[2025-11-24 21:18:19] 2025-11-24 20:17:02,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:18:19] 2025-11-24 20:17:03,060 | INFO     | time since job start (68395s) is within the limit (172800.0s)
[2025-11-24 21:18:19] 2025-11-24 20:17:04,848 | INFO     | monitor loop #4603: job 0:6892534793 is in state 'finished'
[2025-11-24 21:18:19] 2025-11-24 20:17:04,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:18:19] 2025-11-24 20:17:05,066 | INFO     | time since job start (68397s) is within the limit (172800.0s)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,073 | INFO     | time since job start (68399s) is within the limit (172800.0s)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,074 | INFO     | 68404s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 21:18:19] 2025-11-24 20:17:07,353 | INFO     | monitor loop #4604: job 0:6892534793 is in state 'finished'
[2025-11-24 21:18:19] 2025-11-24 20:17:07,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,429 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 21:18:19] 2025-11-24 20:17:07,430 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-24 21:18:19] 2025-11-24 20:17:07,431 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6892534793/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,432 | INFO     | extracted standard info from prmon json
[2025-11-24 21:18:19] 2025-11-24 20:17:07,432 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:18:19] 2025-11-24 20:17:07,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:18:19] 2025-11-24 20:17:07,463 | INFO     | fitting pss+swap vs Time
[2025-11-24 21:18:19] 2025-11-24 20:17:07,465 | INFO     | sum of square deviations: 429834361773.825
[2025-11-24 21:18:19] 2025-11-24 20:17:07,498 | INFO     | sum of deviations: 949566643093.1168
[2025-11-24 21:18:19] 2025-11-24 20:17:07,499 | INFO     | mean x: 1763981284.987444
[2025-11-24 21:18:19] 2025-11-24 20:17:07,499 | INFO     | mean y: 2838150.5085201794
[2025-11-24 21:18:19] 2025-11-24 20:17:07,499 | INFO     | intersect: -3894053155.1381636
[2025-11-24 21:18:19] 2025-11-24 20:17:07,501 | INFO     | chi2: 18.01894608805866
[2025-11-24 21:18:19] 2025-11-24 20:17:07,502 | INFO     | sum of square deviations: 424078040801.4261
[2025-11-24 21:18:19] 2025-11-24 20:17:07,569 | INFO     | sum of deviations: 1318845696337.428
[2025-11-24 21:18:19] 2025-11-24 20:17:07,570 | INFO     | mean x: 1763981132.4918919
[2025-11-24 21:18:19] 2025-11-24 20:17:07,578 | INFO     | mean y: 2847932.4918918917
[2025-11-24 21:18:19] 2025-11-24 20:17:07,578 | INFO     | intersect: -5482979441.665159
[2025-11-24 21:18:19] 2025-11-24 20:17:07,580 | INFO     | chi2: 14.659056470973113
[2025-11-24 21:18:19] 2025-11-24 20:17:07,580 | INFO     | current chi2=14.659056470973113 (change=18.646426936768403 %)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,580 | INFO     | right removable region: 1109
[2025-11-24 21:18:19] 2025-11-24 20:17:07,582 | INFO     | sum of square deviations: 424077369191.4258
[2025-11-24 21:18:19] 2025-11-24 20:17:07,624 | INFO     | sum of deviations: 605267240828.5314
[2025-11-24 21:18:19] 2025-11-24 20:17:07,625 | INFO     | mean x: 1763981437.4918919
[2025-11-24 21:18:19] 2025-11-24 20:17:07,625 | INFO     | mean y: 2847264.6144144144
[2025-11-24 21:18:19] 2025-11-24 20:17:07,625 | INFO     | intersect: -2514806953.9522924
[2025-11-24 21:18:19] 2025-11-24 20:17:07,626 | INFO     | chi2: 15.440692675834061
[2025-11-24 21:18:19] 2025-11-24 20:17:07,627 | INFO     | current chi2=15.440692675834061 (change=14.308569433665339 %)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,627 | INFO     | left removable region: 10
[2025-11-24 21:18:19] 2025-11-24 20:17:07,628 | INFO     | sum of square deviations: 411594602065.9847
[2025-11-24 21:18:19] 2025-11-24 20:17:07,662 | INFO     | sum of deviations: 981565943388.4802
[2025-11-24 21:18:19] 2025-11-24 20:17:07,662 | INFO     | mean x: 1763981406.9963603
[2025-11-24 21:18:19] 2025-11-24 20:17:07,663 | INFO     | mean y: 2861332.6196542312
[2025-11-24 21:18:19] 2025-11-24 20:17:07,663 | INFO     | intersect: -4203860682.6524067
[2025-11-24 21:18:19] 2025-11-24 20:17:07,664 | INFO     | chi2: 11.206328587765364
[2025-11-24 21:18:19] 2025-11-24 20:17:07,664 | INFO     | current memory leak: 2.38 B/s (using 1099 data points, chi2=11.21)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,666 | INFO     | could have reported an average CPU frequency of 2249 MHz (38 samples)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,666 | INFO     | ..............................
[2025-11-24 21:18:19] 2025-11-24 20:17:07,666 | INFO     | . Timing measurements:
[2025-11-24 21:18:19] 2025-11-24 20:17:07,666 | INFO     | . get job = 0 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,666 | INFO     | . initial setup = 5 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,666 | INFO     | . payload setup = 58 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,667 | INFO     | . stage-in = 0 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,667 | INFO     | . payload execution = 68017 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,667 | INFO     | . stage-out = 6 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,667 | INFO     | . log creation = 2 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,667 | INFO     | ..............................
[2025-11-24 21:18:19] 2025-11-24 20:17:07,804 | INFO     | 
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | job summary report
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | --------------------------------------------------
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | PanDA job id: 6892534793
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | task id: 47493029
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | errors: (none)
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | pilot state: finished 
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | transexitcode: 0
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | exeerrorcode: 0
[2025-11-24 21:18:19] 2025-11-24 20:17:07,805 | INFO     | exeerrordiag: 
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | exitcode: 0
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | exitmsg: OK
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | cpuconsumptiontime: 304809 s
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | nevents: 1000
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | neventsw: 0
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | pid: 26646
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | pgrp: 26646
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | corecount: 8
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | event service: False
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | sizes: {0: 2298626, 1: 2298825, 12: 2298825, 23: 2298853, 33: 2298881, 44: 2298937, 55: 2299093, 66: 2299121, 76: 2299149, 87: 2299205, 98: 2299233, 102: 2299803, 
[2025-11-24 21:18:19] 2025-11-24 20:17:07,806 | INFO     | --------------------------------------------------
[2025-11-24 21:18:19] 2025-11-24 20:17:07,807 | INFO     | 
[2025-11-24 21:18:19] 2025-11-24 20:17:07,807 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-24 21:18:19] 2025-11-24 20:17:08,483 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,483 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,483 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:18:19] 2025-11-24 20:17:08,486 | INFO     | job 6892534793 has completed (purged errors)
[2025-11-24 21:18:19] 2025-11-24 20:17:08,486 | INFO     | overall cleanup function is called
[2025-11-24 21:18:19] 2025-11-24 20:17:09,503 | INFO     | --- collectZombieJob: --- 10, [26646]
[2025-11-24 21:18:19] 2025-11-24 20:17:09,504 | INFO     | zombie collector waiting for pid 26646
[2025-11-24 21:18:19] 2025-11-24 20:17:09,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:18:19] 2025-11-24 20:17:09,504 | INFO     | collected zombie processes
[2025-11-24 21:18:19] 2025-11-24 20:17:09,504 | INFO     | will attempt to kill all subprocesses of pid=26646
[2025-11-24 21:18:19] 2025-11-24 20:17:09,582 | INFO     | process IDs to be killed: [26646] (in reverse order)
[2025-11-24 21:18:19] 2025-11-24 20:17:09,950 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:18:19] 2025-11-24 20:17:09,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:18:19] 2025-11-24 20:17:09,952 | INFO     | did not find any defunct processes belonging to 26646
[2025-11-24 21:18:19] 2025-11-24 20:17:09,954 | INFO     | did not find any defunct processes belonging to 26646
[2025-11-24 21:18:19] 2025-11-24 20:17:09,960 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:18:19] 2025-11-24 20:17:09,960 | INFO     | ready for new job
[2025-11-24 21:18:19] 2025-11-24 20:17:09,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:18:19] 2025-11-24 20:17:09,964 | INFO     | ***************************************
[2025-11-24 21:18:19] 2025-11-24 20:17:09,964 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:18:19] 2025-11-24 20:17:09,964 | INFO     | ***************************************
[2025-11-24 21:18:19] 2025-11-24 20:17:09,965 | INFO     | 
[2025-11-24 21:18:19] 2025-11-24 20:17:09,965 | INFO     | pilot is running in a VM
[2025-11-24 21:18:19] 2025-11-24 20:17:09,965 | INFO     | architecture information:
[2025-11-24 21:18:19] 2025-11-24 20:17:09,966 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:18:19] 2025-11-24 20:17:09,995 | INFO     | cat /etc/os-release:
[2025-11-24 21:18:19] NAME="CentOS Linux"
[2025-11-24 21:18:19] VERSION="7 (Core)"
[2025-11-24 21:18:19] ID="centos"
[2025-11-24 21:18:19] ID_LIKE="rhel fedora"
[2025-11-24 21:18:19] VERSION_ID="7"
[2025-11-24 21:18:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:18:19] ANSI_COLOR="0;31"
[2025-11-24 21:18:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:18:19] HOME_URL="https://www.centos.org/"
[2025-11-24 21:18:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:18:19] 
[2025-11-24 21:18:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:18:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:18:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:18:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:18:19] 
[2025-11-24 21:18:19] 2025-11-24 20:17:09,996 | INFO     | ***************************************
[2025-11-24 21:18:19] 2025-11-24 20:17:10,499 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-24 21:18:19] 2025-11-24 20:17:10,732 | INFO     | sufficient remaining disk space (494626930688 B)
[2025-11-24 21:18:19] 2025-11-24 20:17:10,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:18:19] 2025-11-24 20:17:10,733 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:18:19] 2025-11-24 20:17:10,733 | INFO     | update_server=False
[2025-11-24 21:18:19] 2025-11-24 20:17:10,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:18:19] 2025-11-24 20:17:10,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:18:19] 2025-11-24 20:17:10,865 | INFO     | aborting loop
[2025-11-24 21:18:19] 2025-11-24 20:17:11,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:18:19] 2025-11-24 20:17:11,696 | INFO     | all data control threads have been joined
[2025-11-24 21:18:19] 2025-11-24 20:17:11,738 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:11,772 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:11,792 | INFO     | all payload control threads have been joined
[2025-11-24 21:18:19] 2025-11-24 20:17:11,805 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:11,870 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:11,897 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:12,001 | INFO     | [job] validate thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:12,361 | INFO     | all job control threads have been joined
[2025-11-24 21:18:19] 2025-11-24 20:17:12,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:12,573 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:12,702 | INFO     | [data] control thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:12,798 | INFO     | [payload] control thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:12,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:18:19] 2025-11-24 20:17:12,879 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:13,090 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:13,367 | INFO     | [job] control thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:13,669 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:13,827 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:14,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:18:19] 2025-11-24 20:17:18,229 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:18:19] 2025-11-24 20:17:40,176 | INFO     | PID=20014 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 21:18:19] 2025-11-24 20:17:40,176 | INFO     | .. there are 2 such processes running
[2025-11-24 21:18:19] 2025-11-24 20:17:40,177 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:18:19] 2025-11-24 20:17:40,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:18:19] 2025-11-24 20:17:40,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:18:19] 2025-11-24 20:18:05,909 [wrapper] supervise_pilot (15 min periods counter: 77)
[2025-11-24 21:18:19] 2025-11-24 20:18:06,663 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:18:19] 2025-11-24 20:18:08,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911361853248)>', '<ExcThread(monitor, started 139910681970432)>']
[2025-11-24 21:18:19] 2025-11-24 20:18:09,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:18:19] 2025-11-24 20:18:09,352 | INFO     | [monitor] control thread has ended
[2025-11-24 21:18:19] 2025-11-24 20:18:13,497 | INFO     | all workflow threads have been joined
[2025-11-24 21:18:19] 2025-11-24 20:18:13,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:18:19] 2025-11-24 20:18:13,498 | INFO     | traces error code: 0
[2025-11-24 21:18:19] 2025-11-24 20:18:13,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:18:19] 2025-11-24 20:18:13,873 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:18:19] 2025-11-24 20:18:13,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:18:19] 2025-11-24 20:18:14,105 [wrapper] pilotpid: 20014
[2025-11-24 21:18:19] 2025-11-24 20:18:14,170 [wrapper] Pilot exit status: 0
[2025-11-24 21:18:19] 2025-11-24 20:18:14,658 [wrapper] pandaids: 6892534793
[2025-11-24 21:18:19] 2025-11-24 20:18:15,816 [wrapper] cleanup supervisor_pilot 30314 20015
[2025-11-24 21:18:19] 2025-11-24 20:18:15,915 [wrapper] Test setup, not cleaning
[2025-11-24 21:18:19] 2025-11-24 20:18:16,037 [wrapper] apfmon messages muted
[2025-11-24 21:18:19] 2025-11-24 20:18:16,154 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:18:19] 2025-11-24 20:18:16,259 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:18:19]  *** Error codes and diagnostics ***
[2025-11-24 21:18:19]     "exeErrorCode": 0,
[2025-11-24 21:18:19]     "exeErrorDiag": "",
[2025-11-24 21:18:19]     "pilotErrorCode": 0,
[2025-11-24 21:18:19]     "pilotErrorDiag": "",
[2025-11-24 21:18:19]  *** Listing of results directory ***
[2025-11-24 21:18:19] total 1326808
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc      5112 Nov 19 08:27 queuedata.json
[2025-11-24 21:18:19] -rwx------. 1 boinc boinc     36292 Nov 19 08:27 runpilot2-wrapper.sh
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc    576529 Nov 19 08:27 pilot3.tar.gz
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:18:19] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:12 run_atlas
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:12 job.xml
[2025-11-24 21:18:19] -rw-r--r--. 2 boinc boinc 411877933 Nov 24 02:12 EVNT.47493027._000177.pool.root.1
[2025-11-24 21:18:19] -rw-r--r--. 2 boinc boinc     15120 Nov 24 02:12 start_atlas.sh
[2025-11-24 21:18:19] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:12 shared
[2025-11-24 21:18:19] -rw-r--r--. 2 boinc boinc    590088 Nov 24 02:12 input.tar.gz
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc      6392 Nov 24 02:12 init_data.xml
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:12 boinc_lockfile
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc      2773 Nov 24 02:13 pandaJob.out
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc    989786 Nov 24 02:17 agis_schedconf.cvmfs.json
[2025-11-24 21:18:19] drwx------. 5 boinc boinc      4096 Nov 24 02:17 pilot3
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc       533 Nov 24 20:47 boinc_task_state.xml
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc 920183446 Nov 24 21:13 HITS.47493029._001730.pool.root.1
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc      1031 Nov 24 21:14 memory_monitor_summary.json
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc   1516227 Nov 24 21:15 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc   2250244 Nov 24 21:15 log.47493029._001730.job.log.tgz.1
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc      7959 Nov 24 21:17 heartbeat.json
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc        95 Nov 24 21:17 pilot_heartbeat.json
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc        29 Nov 24 21:17 wrapper_checkpoint.txt
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc      8192 Nov 24 21:17 boinc_mmap_file
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc      4885 Nov 24 21:18 pilotlog.txt
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc   9096578 Nov 24 21:18 log.47493029._001730.job.log.1
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc       353 Nov 24 21:18 output.list
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc       620 Nov 24 21:18 runtime_log
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc  11366400 Nov 24 21:18 result.tar.gz
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc      8717 Nov 24 21:18 runtime_log.err
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc       661 Nov 24 21:18 h6RKDmhmrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTpGKDm29CMpm.diag
[2025-11-24 21:18:19] -rw-r--r--. 1 boinc boinc     21387 Nov 24 21:18 stderr.txt
[2025-11-24 21:18:19] HITS file was successfully produced:
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc 920183446 Nov 24 21:13 shared/HITS.pool.root.1
[2025-11-24 21:18:19]  *** Contents of shared directory: ***
[2025-11-24 21:18:19] total 1312544
[2025-11-24 21:18:19] -rw-r--r--. 2 boinc boinc 411877933 Nov 24 02:12 ATLAS.root_0
[2025-11-24 21:18:19] -rw-r--r--. 2 boinc boinc     15120 Nov 24 02:12 start_atlas.sh
[2025-11-24 21:18:19] -rw-r--r--. 2 boinc boinc    590088 Nov 24 02:12 input.tar.gz
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc 920183446 Nov 24 21:13 HITS.pool.root.1
[2025-11-24 21:18:19] -rw-------. 1 boinc boinc  11366400 Nov 24 21:18 result.tar.gz
21:18:20 (16207): run_atlas exited; CPU time 304947.727327
21:18:20 (16207): called boinc_finish(0)

</stderr_txt>
]]>

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