Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:21 (3525985): wrapper (7.7.26015): starting
11:56:21 (3525985): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 11:56:21] Arguments: --nthreads 9
[2025-11-21 11:56:21] Threads: 9
[2025-11-21 11:56:21] Checking for CVMFS
[2025-11-21 11:56:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 11:56:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 11:56:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 11:56:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 11:56:23] 2.13.2.0 9698 26911 267720 153135 1 415 34090385 40960001 8929 16776704 0 23438089 99.583 20800741 26840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 11:56:23] CVMFS is ok
[2025-11-21 11:56:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 11:56:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 11:56:23] Further information can be found at the LHC@home message board.
[2025-11-21 11:56:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 11:56:23] Checking for apptainer binary...
[2025-11-21 11:56:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 11:56:23] Running /usr/bin/apptainer --version
[2025-11-21 11:56:23] apptainer version 1.4.4-1.el9
[2025-11-21 11:56:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 11:56:23] c-210-8.aglt2.org
[2025-11-21 11:56:23] apptainer works
[2025-11-21 11:56:23] Set ATHENA_PROC_NUMBER=9
[2025-11-21 11:56:23] Set ATHENA_CORE_NUMBER=9
[2025-11-21 11:56:24] Starting ATLAS job with PandaID=6893861416
[2025-11-21 11:56:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 05:57:09]  *** The last 200 lines of the pilot log: ***
[2025-11-23 05:57:09] 2025-11-23 10:55:55,965 | INFO     | monitor loop #8215: job 0:6893861416 is in state 'finished'
[2025-11-23 05:57:09] 2025-11-23 10:55:55,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:57:09] 2025-11-23 10:55:57,465 | INFO     | time since job start (151121s) is within the limit (172800.0s)
[2025-11-23 05:57:09] 2025-11-23 10:55:58,487 | INFO     | monitor loop #8216: job 0:6893861416 is in state 'finished'
[2025-11-23 05:57:09] 2025-11-23 10:55:58,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:57:09] 2025-11-23 10:55:59,472 | INFO     | time since job start (151123s) is within the limit (172800.0s)
[2025-11-23 05:57:09] 2025-11-23 10:56:01,028 | INFO     | monitor loop #8217: job 0:6893861416 is in state 'finished'
[2025-11-23 05:57:09] 2025-11-23 10:56:01,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:57:09] 2025-11-23 10:56:01,465 | INFO     | PID=3538480 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 05:57:09] 2025-11-23 10:56:01,465 | INFO     | .. there are 18 such processes running
[2025-11-23 05:57:09] 2025-11-23 10:56:02,467 | INFO     | time since job start (151126s) is within the limit (172800.0s)
[2025-11-23 05:57:09] 2025-11-23 10:56:03,534 | INFO     | monitor loop #8218: job 0:6893861416 is in state 'finished'
[2025-11-23 05:57:09] 2025-11-23 10:56:03,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:57:09] 2025-11-23 10:56:04,474 | INFO     | time since job start (151128s) is within the limit (172800.0s)
[2025-11-23 05:57:09] 2025-11-23 10:56:05,969 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 05:57:09] 2025-11-23 10:56:05,987 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2434.584375
[2025-11-23 05:57:09] 2025-11-23 10:56:05,998 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893861416/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 05:57:09] 2025-11-23 10:56:05,999 | INFO     | extracted standard info from prmon json
[2025-11-23 05:57:09] 2025-11-23 10:56:05,999 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 05:57:09] 2025-11-23 10:56:05,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 05:57:09] 2025-11-23 10:56:06,047 | INFO     | fitting pss+swap vs Time
[2025-11-23 05:57:09] 2025-11-23 10:56:06,051 | INFO     | sum of square deviations: 4706035830297.757
[2025-11-23 05:57:09] 2025-11-23 10:56:06,061 | INFO     | monitor loop #8219: job 0:6893861416 is in state 'finished'
[2025-11-23 05:57:09] 2025-11-23 10:56:06,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:57:09] 2025-11-23 10:56:06,374 | INFO     | sum of deviations: 4740709700831.448
[2025-11-23 05:57:09] 2025-11-23 10:56:06,375 | INFO     | mean x: 1763819845.453958
[2025-11-23 05:57:09] 2025-11-23 10:56:06,375 | INFO     | mean y: 3152560.7887722133
[2025-11-23 05:57:09] 2025-11-23 10:56:06,375 | INFO     | intersect: -1773663033.7779071
[2025-11-23 05:57:09] 2025-11-23 10:56:06,378 | INFO     | chi2: 25.55493745815413
[2025-11-23 05:57:09] 2025-11-23 10:56:06,384 | INFO     | sum of square deviations: 4677584540295.789
[2025-11-23 05:57:09] 2025-11-23 10:56:06,494 | INFO     | time since job start (151130s) is within the limit (172800.0s)
[2025-11-23 05:57:09] 2025-11-23 10:56:06,631 | INFO     | sum of deviations: 5749611371682.441
[2025-11-23 05:57:09] 2025-11-23 10:56:06,631 | INFO     | mean x: 1763819692.9700527
[2025-11-23 05:57:09] 2025-11-23 10:56:06,631 | INFO     | mean y: 3157967.3302306756
[2025-11-23 05:57:09] 2025-11-23 10:56:06,631 | INFO     | intersect: -2164900712.728764
[2025-11-23 05:57:09] 2025-11-23 10:56:06,635 | INFO     | chi2: 21.63237567831278
[2025-11-23 05:57:09] 2025-11-23 10:56:06,635 | INFO     | current chi2=21.63237567831278 (change=15.34952604076802 %)
[2025-11-23 05:57:09] 2025-11-23 10:56:06,635 | INFO     | right removable region: 2470
[2025-11-23 05:57:09] 2025-11-23 10:56:06,639 | INFO     | sum of square deviations: 4677572526955.798
[2025-11-23 05:57:09] 2025-11-23 10:56:06,842 | INFO     | sum of deviations: 3783322306952.6343
[2025-11-23 05:57:09] 2025-11-23 10:56:06,842 | INFO     | mean x: 1763819997.9700527
[2025-11-23 05:57:09] 2025-11-23 10:56:06,843 | INFO     | mean y: 3157689.778632133
[2025-11-23 05:57:09] 2025-11-23 10:56:06,843 | INFO     | intersect: -1423458253.707798
[2025-11-23 05:57:09] 2025-11-23 10:56:06,846 | INFO     | chi2: 22.332044921309755
[2025-11-23 05:57:09] 2025-11-23 10:56:06,847 | INFO     | current chi2=22.332044921309755 (change=12.611623652461748 %)
[2025-11-23 05:57:09] 2025-11-23 10:56:06,847 | INFO     | left removable region: 10
[2025-11-23 05:57:09] 2025-11-23 10:56:06,851 | INFO     | sum of square deviations: 4615372812834.98
[2025-11-23 05:57:09] 2025-11-23 10:56:07,112 | INFO     | sum of deviations: 4702795022356.38
[2025-11-23 05:57:09] 2025-11-23 10:56:07,112 | INFO     | mean x: 1763819967.502439
[2025-11-23 05:57:09] 2025-11-23 10:56:07,113 | INFO     | mean y: 3165446.68902439
[2025-11-23 05:57:09] 2025-11-23 10:56:07,113 | INFO     | intersect: -1794063964.6460376
[2025-11-23 05:57:09] 2025-11-23 10:56:07,117 | INFO     | chi2: 17.65320786237716
[2025-11-23 05:57:09] 2025-11-23 10:56:07,117 | INFO     | current memory leak: 1.02 B/s (using 2460 data points, chi2=17.65)
[2025-11-23 05:57:09] 2025-11-23 10:56:07,120 | INFO     | could have reported an average CPU frequency of 2567 MHz (85 samples)
[2025-11-23 05:57:09] 2025-11-23 10:56:07,121 | INFO     | ..............................
[2025-11-23 05:57:09] 2025-11-23 10:56:07,121 | INFO     | . Timing measurements:
[2025-11-23 05:57:09] 2025-11-23 10:56:07,121 | INFO     | . get job = 0 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,121 | INFO     | . initial setup = 3 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,121 | INFO     | . payload setup = 31 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,121 | INFO     | . stage-in = 0 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,152 | INFO     | . payload execution = 151008 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,152 | INFO     | . stage-out = 7 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,152 | INFO     | . log creation = 2 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,153 | INFO     | ..............................
[2025-11-23 05:57:09] 2025-11-23 10:56:07,305 | INFO     | 
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | job summary report
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | --------------------------------------------------
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | PanDA job id: 6893861416
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | task id: 47523449
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | errors: (none)
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | pilot state: finished 
[2025-11-23 05:57:09] 2025-11-23 10:56:07,306 | INFO     | transexitcode: 0
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | exeerrorcode: 0
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | exeerrordiag: 
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | exitcode: 0
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | exitmsg: OK
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | cpuconsumptiontime: 334517 s
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | nevents: 1000
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | neventsw: 0
[2025-11-23 05:57:09] 2025-11-23 10:56:07,307 | INFO     | pid: 3563155
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | pgrp: 3563155
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | corecount: 9
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | event service: False
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | sizes: {0: 2298636, 1: 2298835, 2: 2298835, 12: 2298863, 23: 2298891, 26: 2299181, 34: 2299337, 151040: 2391055, 151041: 2391054, 151048: 2400104, 151050: 2400160,
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | --------------------------------------------------
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | 
[2025-11-23 05:57:09] 2025-11-23 10:56:07,308 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-23 05:57:09] 2025-11-23 10:56:07,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 05:57:09] 2025-11-23 10:56:07,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 05:57:09] 2025-11-23 10:56:07,410 | INFO     | job 6893861416 has completed (purged errors)
[2025-11-23 05:57:09] 2025-11-23 10:56:07,410 | INFO     | overall cleanup function is called
[2025-11-23 05:57:09] 2025-11-23 10:56:08,460 | INFO     | --- collectZombieJob: --- 10, [3563155]
[2025-11-23 05:57:09] 2025-11-23 10:56:08,460 | INFO     | zombie collector waiting for pid 3563155
[2025-11-23 05:57:09] 2025-11-23 10:56:08,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 05:57:09] 2025-11-23 10:56:08,460 | INFO     | collected zombie processes
[2025-11-23 05:57:09] 2025-11-23 10:56:08,460 | INFO     | will attempt to kill all subprocesses of pid=3563155
[2025-11-23 05:57:09] 2025-11-23 10:56:09,018 | INFO     | process IDs to be killed: [3563155] (in reverse order)
[2025-11-23 05:57:09] 2025-11-23 10:56:09,154 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 05:57:09] 2025-11-23 10:56:09,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 05:57:09] 2025-11-23 10:56:09,167 | INFO     | did not find any defunct processes belonging to 3563155
[2025-11-23 05:57:09] 2025-11-23 10:56:09,181 | INFO     | did not find any defunct processes belonging to 3563155
[2025-11-23 05:57:09] 2025-11-23 10:56:09,183 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 05:57:09] 2025-11-23 10:56:09,183 | INFO     | ready for new job
[2025-11-23 05:57:09] 2025-11-23 10:56:09,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 05:57:09] 2025-11-23 10:56:09,195 | INFO     | ***************************************
[2025-11-23 05:57:09] 2025-11-23 10:56:09,195 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 05:57:09] 2025-11-23 10:56:09,195 | INFO     | ***************************************
[2025-11-23 05:57:09] 2025-11-23 10:56:09,195 | INFO     | 
[2025-11-23 05:57:09] 2025-11-23 10:56:09,199 | INFO     | architecture information:
[2025-11-23 05:57:09] 2025-11-23 10:56:09,199 | INFO     | executing command: cat /etc/os-release
[2025-11-23 05:57:09] 2025-11-23 10:56:09,222 | INFO     | cat /etc/os-release:
[2025-11-23 05:57:09] NAME="CentOS Linux"
[2025-11-23 05:57:09] VERSION="7 (Core)"
[2025-11-23 05:57:09] ID="centos"
[2025-11-23 05:57:09] ID_LIKE="rhel fedora"
[2025-11-23 05:57:09] VERSION_ID="7"
[2025-11-23 05:57:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 05:57:09] ANSI_COLOR="0;31"
[2025-11-23 05:57:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 05:57:09] HOME_URL="https://www.centos.org/"
[2025-11-23 05:57:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 05:57:09] 
[2025-11-23 05:57:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 05:57:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 05:57:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 05:57:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 05:57:09] 
[2025-11-23 05:57:09] 2025-11-23 10:56:09,223 | INFO     | ***************************************
[2025-11-23 05:57:09] 2025-11-23 10:56:09,726 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-23 05:57:09] 2025-11-23 10:56:09,859 | INFO     | sufficient remaining disk space (58719207424 B)
[2025-11-23 05:57:09] 2025-11-23 10:56:09,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 05:57:09] 2025-11-23 10:56:09,859 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 05:57:09] 2025-11-23 10:56:09,860 | INFO     | update_server=False
[2025-11-23 05:57:09] 2025-11-23 10:56:09,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 05:57:09] 2025-11-23 10:56:09,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:57:09] 2025-11-23 10:56:09,860 | INFO     | aborting loop
[2025-11-23 05:57:09] 2025-11-23 10:56:09,892 | INFO     | all job control threads have been joined
[2025-11-23 05:57:09] 2025-11-23 10:56:09,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 05:57:09] 2025-11-23 10:56:10,101 | INFO     | all payload control threads have been joined
[2025-11-23 05:57:09] 2025-11-23 10:56:10,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 05:57:09] 2025-11-23 10:56:10,866 | INFO     | [job] retrieve thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:10,867 | INFO     | [job] job monitor thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:10,891 | INFO     | all data control threads have been joined
[2025-11-23 05:57:09] 2025-11-23 10:56:10,905 | INFO     | [payload] failed_post thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:10,913 | INFO     | [job] control thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,107 | INFO     | [payload] control thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,312 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,366 | INFO     | [job] validate thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,638 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,893 | INFO     | [payload] validate_post thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,897 | INFO     | [data] control thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:11,960 | INFO     | [data] copytool_out thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:12,117 | INFO     | [data] copytool_in thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:12,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:57:09] 2025-11-23 10:56:12,336 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:13,327 | INFO     | [job] queue monitor thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:14,313 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 05:57:09] 2025-11-23 10:56:40,062 | INFO     | PID=3538480 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 05:57:09] 2025-11-23 10:56:40,063 | INFO     | .. there are 18 such processes running
[2025-11-23 05:57:09] 2025-11-23 10:56:40,063 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 05:57:09] 2025-11-23 10:56:40,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 05:57:09] 2025-11-23 10:56:40,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 05:57:09] 2025-11-23 10:57:01,250 | INFO     | [monitor] cgroup control has ended
[2025-11-23 05:57:09] 2025-11-23 10:57:03,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140667619448640)>', '<ExcThread(monitor, started 140667124692736)>']
[2025-11-23 05:57:09] 2025-11-23 10:57:04,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 05:57:09] 2025-11-23 10:57:04,223 | INFO     | [monitor] control thread has ended
[2025-11-23 05:57:09] 2025-11-23 10:57:08,292 | INFO     | all workflow threads have been joined
[2025-11-23 05:57:09] 2025-11-23 10:57:08,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 05:57:09] 2025-11-23 10:57:08,292 | INFO     | traces error code: 0
[2025-11-23 05:57:09] 2025-11-23 10:57:08,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 05:57:09] 2025-11-23 10:57:08,562 [wrapper] ==== pilot stdout END ====
[2025-11-23 05:57:09] 2025-11-23 10:57:08,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 05:57:09] 2025-11-23 10:57:08,586 [wrapper] pilotpid: 3538480
[2025-11-23 05:57:09] 2025-11-23 10:57:08,590 [wrapper] Pilot exit status: 0
[2025-11-23 05:57:09] 2025-11-23 10:57:08,610 [wrapper] pandaids: 6893861416
[2025-11-23 05:57:09] 2025-11-23 10:57:08,675 [wrapper] cleanup supervisor_pilot 3813445 3538481
[2025-11-23 05:57:09] 2025-11-23 10:57:08,679 [wrapper] Test setup, not cleaning
[2025-11-23 05:57:09] 2025-11-23 10:57:08,683 [wrapper] apfmon messages muted
[2025-11-23 05:57:09] 2025-11-23 10:57:08,686 [wrapper] ==== wrapper stdout END ====
[2025-11-23 05:57:09] 2025-11-23 10:57:08,690 [wrapper] ==== wrapper stderr END ====
[2025-11-23 05:57:09]  *** Error codes and diagnostics ***
[2025-11-23 05:57:09]     "exeErrorCode": 0,
[2025-11-23 05:57:09]     "exeErrorDiag": "",
[2025-11-23 05:57:09]     "pilotErrorCode": 0,
[2025-11-23 05:57:09]     "pilotErrorDiag": "",
[2025-11-23 05:57:09]  *** Listing of results directory ***
[2025-11-23 05:57:09] total 1338848
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:50 pilot3.tar.gz
[2025-11-23 05:57:09] -rwx------. 1 boincer umatlas     36292 Nov 20 08:54 runpilot2-wrapper.sh
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:54 queuedata.json
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas       100 Nov 21 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 05:57:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 11:56 run_atlas
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas       105 Nov 21 11:56 job.xml
[2025-11-23 05:57:09] -rw-r--r--. 2 boincer umatlas 409733646 Nov 21 11:56 EVNT.47493127._000565.pool.root.1
[2025-11-23 05:57:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 11:56 start_atlas.sh
[2025-11-23 05:57:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 11:56 shared
[2025-11-23 05:57:09] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 11:56 input.tar.gz
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas         0 Nov 21 11:56 boinc_lockfile
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 11:56 pandaJob.out
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas        57 Nov 21 11:56 setup.sh.local
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas    989798 Nov 21 11:57 agis_schedconf.cvmfs.json
[2025-11-23 05:57:09] drwx------. 5 boincer umatlas      4096 Nov 21 11:57 pilot3
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas       533 Nov 23 04:34 boinc_task_state.xml
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas 915091393 Nov 23 05:53 HITS.47523449._005646.pool.root.1
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas      1069 Nov 23 05:55 memory_monitor_summary.json
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas   1526164 Nov 23 05:55 agis_ddmendpoints.agis.ALL.json
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas   3219955 Nov 23 05:55 log.47523449._005646.job.log.tgz.1
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas        95 Nov 23 05:55 pilot_heartbeat.json
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas      8635 Nov 23 05:56 heartbeat.json
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas      6613 Nov 23 05:56 init_data.xml
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas      4824 Nov 23 05:57 pilotlog.txt
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas  17897153 Nov 23 05:57 log.47523449._005646.job.log.1
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas       353 Nov 23 05:57 output.list
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas       620 Nov 23 05:57 runtime_log
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas  21135360 Nov 23 05:57 result.tar.gz
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas      9339 Nov 23 05:57 runtime_log.err
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas       664 Nov 23 05:57 6cPMDmSIKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzkGKDmkSAG3n.diag
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 05:57 boinc_mmap_file
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas        29 Nov 23 05:57 wrapper_checkpoint.txt
[2025-11-23 05:57:09] -rw-r--r--. 1 boincer umatlas     21886 Nov 23 05:57 stderr.txt
[2025-11-23 05:57:09] HITS file was successfully produced:
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas 915091393 Nov 23 05:53 shared/HITS.pool.root.1
[2025-11-23 05:57:09]  *** Contents of shared directory: ***
[2025-11-23 05:57:09] total 1315016
[2025-11-23 05:57:09] -rw-r--r--. 2 boincer umatlas 409733646 Nov 21 11:56 ATLAS.root_0
[2025-11-23 05:57:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 11:56 start_atlas.sh
[2025-11-23 05:57:09] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 11:56 input.tar.gz
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas 915091393 Nov 23 05:53 HITS.pool.root.1
[2025-11-23 05:57:09] -rw-------. 1 boincer umatlas  21135360 Nov 23 05:57 result.tar.gz
05:57:11 (3525985): run_atlas exited; CPU time 338460.963784
05:57:11 (3525985): called boinc_finish(0)

</stderr_txt>
]]>

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