Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:31:22 (2901): wrapper (7.7.26015): starting
00:31:22 (2901): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:31:22] Arguments: --nthreads 8
[2025-11-24 00:31:22] Threads: 8
[2025-11-24 00:31:22] Checking for CVMFS
[2025-11-24 00:31:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:31:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:31:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:31:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:31:25] 2.11.2.0 15591 85010 100028 153226 1 84 22787363 25165824 4632 130560 3 24072072 99.871 13553142 2043 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 00:31:25] CVMFS is ok
[2025-11-24 00:31:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:31:25] Checking for apptainer binary...
[2025-11-24 00:31:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:31:25] Running /usr/bin/apptainer --version
[2025-11-24 00:31:25] apptainer version 1.3.2-1.el7
[2025-11-24 00:31:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:31:38] cg-vwn260.simple-grid.lan
[2025-11-24 00:31:38] apptainer works
[2025-11-24 00:31:38] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:31:38] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:31:38] Starting ATLAS job with PandaID=6893851181
[2025-11-24 00:31:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:07:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:07:21] 2025-11-25 00:06:02,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:07:21] 2025-11-25 00:06:04,143 | INFO     | time since job start (88226s) is within the limit (172800.0s)
[2025-11-25 01:07:21] 2025-11-25 00:06:05,266 | INFO     | monitor loop #5926: job 0:6893851181 is in state 'finished'
[2025-11-25 01:07:21] 2025-11-25 00:06:05,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:07:21] 2025-11-25 00:06:06,150 | INFO     | time since job start (88228s) is within the limit (172800.0s)
[2025-11-25 01:07:21] 2025-11-25 00:06:07,778 | INFO     | monitor loop #5927: job 0:6893851181 is in state 'finished'
[2025-11-25 01:07:21] 2025-11-25 00:06:07,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:07:21] 2025-11-25 00:06:08,157 | INFO     | time since job start (88230s) is within the limit (172800.0s)
[2025-11-25 01:07:21] 2025-11-25 00:06:10,167 | INFO     | time since job start (88232s) is within the limit (172800.0s)
[2025-11-25 01:07:21] 2025-11-25 00:06:10,282 | INFO     | monitor loop #5928: job 0:6893851181 is in state 'finished'
[2025-11-25 01:07:21] 2025-11-25 00:06:10,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:07:21] 2025-11-25 00:06:12,174 | INFO     | time since job start (88234s) is within the limit (172800.0s)
[2025-11-25 01:07:21] 2025-11-25 00:06:12,791 | INFO     | monitor loop #5929: job 0:6893851181 is in state 'finished'
[2025-11-25 01:07:21] 2025-11-25 00:06:12,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,104 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 01:07:21] 2025-11-25 00:06:13,105 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 01:07:21] 2025-11-25 00:06:13,107 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893851181/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,107 | INFO     | extracted standard info from prmon json
[2025-11-25 01:07:21] 2025-11-25 00:06:13,108 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:07:21] 2025-11-25 00:06:13,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:07:21] 2025-11-25 00:06:13,149 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:07:21] 2025-11-25 00:06:13,161 | INFO     | sum of square deviations: 922043194287.8059
[2025-11-25 01:07:21] 2025-11-25 00:06:13,275 | INFO     | sum of deviations: 2005650654385.215
[2025-11-25 01:07:21] 2025-11-25 00:06:13,275 | INFO     | mean x: 1763985218.716968
[2025-11-25 01:07:21] 2025-11-25 00:06:13,275 | INFO     | mean y: 2855329.204450626
[2025-11-25 01:07:21] 2025-11-25 00:06:13,275 | INFO     | intersect: -3834207977.7681336
[2025-11-25 01:07:21] 2025-11-25 00:06:13,277 | INFO     | chi2: 19.108073826051175
[2025-11-25 01:07:21] 2025-11-25 00:06:13,279 | INFO     | sum of square deviations: 912459073902.8829
[2025-11-25 01:07:21] 2025-11-25 00:06:13,340 | INFO     | sum of deviations: 2476010394317.6177
[2025-11-25 01:07:21] 2025-11-25 00:06:13,340 | INFO     | mean x: 1763985066.2212143
[2025-11-25 01:07:21] 2025-11-25 00:06:13,340 | INFO     | mean y: 2862812.275645499
[2025-11-25 01:07:21] 2025-11-25 00:06:13,340 | INFO     | intersect: -4783812540.409429
[2025-11-25 01:07:21] 2025-11-25 00:06:13,342 | INFO     | chi2: 15.890293521504807
[2025-11-25 01:07:21] 2025-11-25 00:06:13,343 | INFO     | current chi2=15.890293521504807 (change=16.8398988502932 %)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,343 | INFO     | right removable region: 1432
[2025-11-25 01:07:21] 2025-11-25 00:06:13,345 | INFO     | sum of square deviations: 912458006402.8859
[2025-11-25 01:07:21] 2025-11-25 00:06:13,402 | INFO     | sum of deviations: 1577833741714.819
[2025-11-25 01:07:21] 2025-11-25 00:06:13,403 | INFO     | mean x: 1763985371.2212143
[2025-11-25 01:07:21] 2025-11-25 00:06:13,403 | INFO     | mean y: 2862132.795533845
[2025-11-25 01:07:21] 2025-11-25 00:06:13,403 | INFO     | intersect: -3047443326.8238845
[2025-11-25 01:07:21] 2025-11-25 00:06:13,405 | INFO     | chi2: 16.794985103532042
[2025-11-25 01:07:21] 2025-11-25 00:06:13,405 | INFO     | current chi2=16.794985103532042 (change=12.105295089270387 %)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,405 | INFO     | left removable region: 10
[2025-11-25 01:07:21] 2025-11-25 00:06:13,407 | INFO     | sum of square deviations: 891606685510.5857
[2025-11-25 01:07:21] 2025-11-25 00:06:13,468 | INFO     | sum of deviations: 2046800973195.2197
[2025-11-25 01:07:21] 2025-11-25 00:06:13,468 | INFO     | mean x: 1763985340.7264416
[2025-11-25 01:07:21] 2025-11-25 00:06:13,468 | INFO     | mean y: 2872967.1856540083
[2025-11-25 01:07:21] 2025-11-25 00:06:13,469 | INFO     | intersect: -4046588494.6621614
[2025-11-25 01:07:21] 2025-11-25 00:06:13,470 | INFO     | chi2: 12.762989495641472
[2025-11-25 01:07:21] 2025-11-25 00:06:13,471 | INFO     | current memory leak: 2.30 B/s (using 1422 data points, chi2=12.76)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,472 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | ..............................
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | . Timing measurements:
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | . get job = 0 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | . initial setup = 5 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | . payload setup = 183 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | . stage-in = 0 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,473 | INFO     | . payload execution = 87751 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,479 | INFO     | . stage-out = 5 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,479 | INFO     | . log creation = 2 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,479 | INFO     | ..............................
[2025-11-25 01:07:21] 2025-11-25 00:06:13,694 | INFO     | 
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | job summary report
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | --------------------------------------------------
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | PanDA job id: 6893851181
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | task id: 47523449
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | errors: (none)
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | pilot state: finished 
[2025-11-25 01:07:21] 2025-11-25 00:06:13,695 | INFO     | transexitcode: 0
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | exeerrorcode: 0
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | exeerrordiag: 
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | exitcode: 0
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | exitmsg: OK
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | cpuconsumptiontime: 339364 s
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | nevents: 1000
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | neventsw: 0
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | pid: 13263
[2025-11-25 01:07:21] 2025-11-25 00:06:13,696 | INFO     | pgrp: 13263
[2025-11-25 01:07:21] 2025-11-25 00:06:13,697 | INFO     | corecount: 8
[2025-11-25 01:07:21] 2025-11-25 00:06:13,697 | INFO     | event service: False
[2025-11-25 01:07:21] 2025-11-25 00:06:13,697 | INFO     | sizes: {0: 2298580, 1: 2298664, 2: 2298863, 13: 2298863, 23: 2298919, 34: 2298947, 45: 2299103, 56: 2299131, 66: 2299159, 77: 2299187, 88: 2299243, 99: 2299551, 10
[2025-11-25 01:07:21] 2025-11-25 00:06:13,697 | INFO     | --------------------------------------------------
[2025-11-25 01:07:21] 2025-11-25 00:06:13,697 | INFO     | 
[2025-11-25 01:07:21] 2025-11-25 00:06:13,697 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-25 01:07:21] 2025-11-25 00:06:14,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:07:21] 2025-11-25 00:06:14,016 | INFO     | job 6893851181 has completed (purged errors)
[2025-11-25 01:07:21] 2025-11-25 00:06:14,016 | INFO     | overall cleanup function is called
[2025-11-25 01:07:21] 2025-11-25 00:06:15,033 | INFO     | --- collectZombieJob: --- 10, [13263]
[2025-11-25 01:07:21] 2025-11-25 00:06:15,034 | INFO     | zombie collector waiting for pid 13263
[2025-11-25 01:07:21] 2025-11-25 00:06:15,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:07:21] 2025-11-25 00:06:15,034 | INFO     | collected zombie processes
[2025-11-25 01:07:21] 2025-11-25 00:06:15,034 | INFO     | will attempt to kill all subprocesses of pid=13263
[2025-11-25 01:07:21] 2025-11-25 00:06:15,135 | INFO     | process IDs to be killed: [13263] (in reverse order)
[2025-11-25 01:07:21] 2025-11-25 00:06:16,154 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:07:21] 2025-11-25 00:06:16,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:07:21] 2025-11-25 00:06:16,157 | INFO     | did not find any defunct processes belonging to 13263
[2025-11-25 01:07:21] 2025-11-25 00:06:16,160 | INFO     | did not find any defunct processes belonging to 13263
[2025-11-25 01:07:21] 2025-11-25 00:06:16,206 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:07:21] 2025-11-25 00:06:16,206 | INFO     | ready for new job
[2025-11-25 01:07:21] 2025-11-25 00:06:16,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:07:21] 2025-11-25 00:06:16,212 | INFO     | ***************************************
[2025-11-25 01:07:21] 2025-11-25 00:06:16,212 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:07:21] 2025-11-25 00:06:16,212 | INFO     | ***************************************
[2025-11-25 01:07:21] 2025-11-25 00:06:16,212 | INFO     | 
[2025-11-25 01:07:21] 2025-11-25 00:06:16,213 | INFO     | pilot is running in a VM
[2025-11-25 01:07:21] 2025-11-25 00:06:16,213 | INFO     | architecture information:
[2025-11-25 01:07:21] 2025-11-25 00:06:16,224 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:07:21] 2025-11-25 00:06:16,391 | INFO     | cat /etc/os-release:
[2025-11-25 01:07:21] NAME="CentOS Linux"
[2025-11-25 01:07:21] VERSION="7 (Core)"
[2025-11-25 01:07:21] ID="centos"
[2025-11-25 01:07:21] ID_LIKE="rhel fedora"
[2025-11-25 01:07:21] VERSION_ID="7"
[2025-11-25 01:07:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:07:21] ANSI_COLOR="0;31"
[2025-11-25 01:07:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:07:21] HOME_URL="https://www.centos.org/"
[2025-11-25 01:07:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:07:21] 
[2025-11-25 01:07:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:07:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:07:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:07:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:07:21] 
[2025-11-25 01:07:21] 2025-11-25 00:06:16,391 | INFO     | ***************************************
[2025-11-25 01:07:21] 2025-11-25 00:06:16,896 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-25 01:07:21] 2025-11-25 00:06:17,231 | INFO     | sufficient remaining disk space (494755905536 B)
[2025-11-25 01:07:21] 2025-11-25 00:06:17,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:07:21] 2025-11-25 00:06:17,232 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:07:21] 2025-11-25 00:06:17,232 | INFO     | update_server=False
[2025-11-25 01:07:21] 2025-11-25 00:06:17,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:07:21] 2025-11-25 00:06:17,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:07:21] 2025-11-25 00:06:17,232 | INFO     | aborting loop
[2025-11-25 01:07:21] 2025-11-25 00:06:17,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:07:21] 2025-11-25 00:06:17,506 | INFO     | all payload control threads have been joined
[2025-11-25 01:07:21] 2025-11-25 00:06:17,595 | INFO     | all job control threads have been joined
[2025-11-25 01:07:21] 2025-11-25 00:06:17,635 | INFO     | all data control threads have been joined
[2025-11-25 01:07:21] 2025-11-25 00:06:18,237 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,238 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,415 | INFO     | [job] validate thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,512 | INFO     | [payload] control thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,577 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,601 | INFO     | [job] control thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:07:21] 2025-11-25 00:06:18,641 | INFO     | [data] control thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,704 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:18,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:07:21] 2025-11-25 00:06:18,855 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:19,078 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:19,241 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:19,304 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:19,374 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:19,640 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:22,775 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:27,533 | INFO     | job.realtimelogging is not enabled
[2025-11-25 01:07:21] 2025-11-25 00:06:28,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:07:21] 2025-11-25 00:06:36,457 [wrapper] supervise_pilot (15 min periods counter: 99)
[2025-11-25 01:07:21] 2025-11-25 00:06:45,423 | INFO     | PID=6670 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 01:07:21] 2025-11-25 00:06:45,423 | INFO     | .. there are 9 such processes running
[2025-11-25 01:07:21] 2025-11-25 00:06:45,423 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:07:21] 2025-11-25 00:06:45,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:07:21] 2025-11-25 00:06:45,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:07:21] 2025-11-25 00:07:11,004 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:07:21] 2025-11-25 00:07:12,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940758062912)>', '<ExcThread(monitor, started 139940025329408)>']
[2025-11-25 01:07:21] 2025-11-25 00:07:12,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:07:21] 2025-11-25 00:07:12,583 | INFO     | [monitor] control thread has ended
[2025-11-25 01:07:21] 2025-11-25 00:07:17,081 | INFO     | all workflow threads have been joined
[2025-11-25 01:07:21] 2025-11-25 00:07:17,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:07:21] 2025-11-25 00:07:17,082 | INFO     | traces error code: 0
[2025-11-25 01:07:21] 2025-11-25 00:07:17,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:07:21] 2025-11-25 00:07:17,457 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:07:21] 2025-11-25 00:07:17,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:07:21] 2025-11-25 00:07:17,672 [wrapper] pilotpid: 6670
[2025-11-25 01:07:21] 2025-11-25 00:07:17,764 [wrapper] Pilot exit status: 0
[2025-11-25 01:07:21] 2025-11-25 00:07:18,188 [wrapper] pandaids: 6893851181
[2025-11-25 01:07:21] 2025-11-25 00:07:19,259 [wrapper] cleanup supervisor_pilot  1470 6671
[2025-11-25 01:07:21] 2025-11-25 00:07:19,381 [wrapper] Test setup, not cleaning
[2025-11-25 01:07:21] 2025-11-25 00:07:19,467 [wrapper] apfmon messages muted
[2025-11-25 01:07:21] 2025-11-25 00:07:19,520 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:07:21] 2025-11-25 00:07:19,607 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:07:21]  *** Error codes and diagnostics ***
[2025-11-25 01:07:21]     "exeErrorCode": 0,
[2025-11-25 01:07:21]     "exeErrorDiag": "",
[2025-11-25 01:07:21]     "pilotErrorCode": 0,
[2025-11-25 01:07:21]     "pilotErrorDiag": "",
[2025-11-25 01:07:21]  *** Listing of results directory ***
[2025-11-25 01:07:21] total 1337740
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-25 01:07:21] -rwx------. 1 boinc boinc     36292 Nov 20 12:35 runpilot2-wrapper.sh
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:35 queuedata.json
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc       100 Nov 24 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:07:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 00:31 run_atlas
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc       105 Nov 24 00:31 job.xml
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc      6392 Nov 24 00:31 init_data.xml
[2025-11-25 01:07:21] -rw-r--r--. 2 boinc boinc 410207235 Nov 24 00:31 EVNT.47493127._000350.pool.root.1
[2025-11-25 01:07:21] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:31 start_atlas.sh
[2025-11-25 01:07:21] drwxrwx--x. 2 boinc boinc        68 Nov 24 00:31 shared
[2025-11-25 01:07:21] -rw-r--r--. 2 boinc boinc    590102 Nov 24 00:31 input.tar.gz
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc         0 Nov 24 00:31 boinc_lockfile
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc      2786 Nov 24 00:31 pandaJob.out
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc    989786 Nov 24 00:35 agis_schedconf.cvmfs.json
[2025-11-25 01:07:21] drwx------. 5 boinc boinc      4096 Nov 24 00:35 pilot3
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc       533 Nov 25 00:36 boinc_task_state.xml
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc 927363912 Nov 25 01:03 HITS.47523449._003496.pool.root.1
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc      1031 Nov 25 01:04 memory_monitor_summary.json
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc   1516227 Nov 25 01:04 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc   2507835 Nov 25 01:04 log.47523449._003496.job.log.tgz.1
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc        95 Nov 25 01:05 pilot_heartbeat.json
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc      7948 Nov 25 01:06 heartbeat.json
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc        29 Nov 25 01:07 wrapper_checkpoint.txt
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc      8192 Nov 25 01:07 boinc_mmap_file
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc      4955 Nov 25 01:07 pilotlog.txt
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc  11678432 Nov 25 01:07 log.47523449._003496.job.log.1
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc       353 Nov 25 01:07 output.list
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc       620 Nov 25 01:07 runtime_log
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc  14202880 Nov 25 01:07 result.tar.gz
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc      8817 Nov 25 01:07 runtime_log.err
[2025-11-25 01:07:21] -rw-------. 1 boinc boinc       662 Nov 25 01:07 MnPLDma7Hg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIeHKDmhhWSkn.diag
[2025-11-25 01:07:21] -rw-r--r--. 1 boinc boinc     21393 Nov 25 01:07 stderr.txt
[2025-11-25 01:07:21] HITS file was successfully produced:
[2025-11-25 01:07:22] -rw-------. 1 boinc boinc 927363912 Nov 25 01:03 shared/HITS.pool.root.1
[2025-11-25 01:07:22]  *** Contents of shared directory: ***
[2025-11-25 01:07:22] total 1320696
[2025-11-25 01:07:22] -rw-r--r--. 2 boinc boinc 410207235 Nov 24 00:31 ATLAS.root_0
[2025-11-25 01:07:22] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:31 start_atlas.sh
[2025-11-25 01:07:22] -rw-r--r--. 2 boinc boinc    590102 Nov 24 00:31 input.tar.gz
[2025-11-25 01:07:22] -rw-------. 1 boinc boinc 927363912 Nov 25 01:03 HITS.pool.root.1
[2025-11-25 01:07:22] -rw-------. 1 boinc boinc  14202880 Nov 25 01:07 result.tar.gz
01:07:23 (2901): run_atlas exited; CPU time 339927.797947
01:07:23 (2901): called boinc_finish(0)

</stderr_txt>
]]>

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