Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:17:42 (2334076): wrapper (7.7.26015): starting
00:17:42 (2334076): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:17:42] Arguments: --nthreads 9
[2025-11-21 00:17:42] Threads: 9
[2025-11-21 00:17:42] Checking for CVMFS
[2025-11-21 00:17:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:17:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:17:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:17:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:17:44] 2.13.2.0 9698 26212 256732 153110 3 89 38558759 40960000 10673 16776704 0 22105722 99.582 19844850 27015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:17:44] CVMFS is ok
[2025-11-21 00:17:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:17:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:17:44] Further information can be found at the LHC@home message board.
[2025-11-21 00:17:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:17:44] Checking for apptainer binary...
[2025-11-21 00:17:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:17:44] Running /usr/bin/apptainer --version
[2025-11-21 00:17:45] apptainer version 1.4.4-1.el9
[2025-11-21 00:17:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:17:45] c-210-8.aglt2.org
[2025-11-21 00:17:45] apptainer works
[2025-11-21 00:17:45] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:17:45] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:17:45] Starting ATLAS job with PandaID=6893850362
[2025-11-21 00:17:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 05:30:05]  *** The last 200 lines of the pilot log: ***
[2025-11-22 05:30:05] 2025-11-22 10:29:27,612 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893850362/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 05:30:05] 2025-11-22 10:29:27,613 | INFO     | extracted standard info from prmon json
[2025-11-22 05:30:05] 2025-11-22 10:29:27,613 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 05:30:05] 2025-11-22 10:29:27,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 05:30:05] 2025-11-22 10:29:27,648 | INFO     | fitting pss+swap vs Time
[2025-11-22 05:30:05] 2025-11-22 10:29:27,651 | INFO     | sum of square deviations: 1578090131570.373
[2025-11-22 05:30:05] 2025-11-22 10:29:27,787 | INFO     | sum of deviations: 8544965107190.347
[2025-11-22 05:30:05] 2025-11-22 10:29:27,788 | INFO     | mean x: 1763754867.7040699
[2025-11-22 05:30:05] 2025-11-22 10:29:27,788 | INFO     | mean y: 3149123.896511628
[2025-11-22 05:30:05] 2025-11-22 10:29:27,788 | INFO     | intersect: -9547144297.665462
[2025-11-22 05:30:05] 2025-11-22 10:29:27,790 | INFO     | chi2: 13.890838933395537
[2025-11-22 05:30:05] 2025-11-22 10:29:27,797 | INFO     | sum of square deviations: 1564371517913.8914
[2025-11-22 05:30:05] 2025-11-22 10:29:27,949 | INFO     | sum of deviations: 9178591054810.97
[2025-11-22 05:30:05] 2025-11-22 10:29:27,949 | INFO     | mean x: 1763754715.213411
[2025-11-22 05:30:05] 2025-11-22 10:29:27,950 | INFO     | mean y: 3156167.844314869
[2025-11-22 05:30:05] 2025-11-22 10:29:27,951 | INFO     | intersect: -10345270063.74959
[2025-11-22 05:30:05] 2025-11-22 10:29:27,953 | INFO     | chi2: 10.743908389818351
[2025-11-22 05:30:05] 2025-11-22 10:29:27,953 | INFO     | current chi2=10.743908389818351 (change=22.654719118594922 %)
[2025-11-22 05:30:05] 2025-11-22 10:29:27,953 | INFO     | right removable region: 1714
[2025-11-22 05:30:05] 2025-11-22 10:29:27,960 | INFO     | sum of square deviations: 1564368156203.894
[2025-11-22 05:30:05] 2025-11-22 10:29:28,209 | INFO     | sum of deviations: 7784746507786.379
[2025-11-22 05:30:05] 2025-11-22 10:29:28,210 | INFO     | mean x: 1763755020.213411
[2025-11-22 05:30:05] 2025-11-22 10:29:28,210 | INFO     | mean y: 3157572.304956268
[2025-11-22 05:30:05] 2025-11-22 10:29:28,210 | INFO     | intersect: -8773795397.330587
[2025-11-22 05:30:05] 2025-11-22 10:29:28,212 | INFO     | chi2: 9.669203703813263
[2025-11-22 05:30:05] 2025-11-22 10:29:28,225 | INFO     | current chi2=9.669203703813263 (change=30.39150658807847 %)
[2025-11-22 05:30:05] 2025-11-22 10:29:28,227 | INFO     | sum of square deviations: 1550725949774.6123
[2025-11-22 05:30:05] 2025-11-22 10:29:28,334 | INFO     | monitor loop #6388: job 0:6893850362 is in state 'finished'
[2025-11-22 05:30:05] 2025-11-22 10:29:28,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 05:30:05] 2025-11-22 10:29:28,603 | INFO     | sum of deviations: 7172490964254.139
[2025-11-22 05:30:05] 2025-11-22 10:29:28,603 | INFO     | mean x: 1763755172.722807
[2025-11-22 05:30:05] 2025-11-22 10:29:28,604 | INFO     | mean y: 3164415.0192982457
[2025-11-22 05:30:05] 2025-11-22 10:29:28,604 | INFO     | intersect: -8154639380.905764
[2025-11-22 05:30:05] 2025-11-22 10:29:28,606 | INFO     | chi2: 7.011276487918886
[2025-11-22 05:30:05] 2025-11-22 10:29:28,606 | INFO     | current chi2=7.011276487918886 (change=27.48858434791445 %)
[2025-11-22 05:30:05] 2025-11-22 10:29:28,625 | INFO     | sum of square deviations: 1537163905112.7925
[2025-11-22 05:30:05] 2025-11-22 10:29:29,224 | INFO     | sum of deviations: 6806720486706.31
[2025-11-22 05:30:05] 2025-11-22 10:29:29,225 | INFO     | mean x: 1763755325.228739
[2025-11-22 05:30:05] 2025-11-22 10:29:29,225 | INFO     | mean y: 3168525.9325513197
[2025-11-22 05:30:05] 2025-11-22 10:29:29,225 | INFO     | intersect: -7806922165.008366
[2025-11-22 05:30:05] 2025-11-22 10:29:29,227 | INFO     | chi2: 6.096280180343084
[2025-11-22 05:30:05] 2025-11-22 10:29:29,261 | INFO     | current chi2=6.096280180343084 (change=13.05035265906901 %)
[2025-11-22 05:30:05] 2025-11-22 10:29:29,261 | INFO     | left removable region: 30
[2025-11-22 05:30:05] 2025-11-22 10:29:29,263 | INFO     | sum of square deviations: 1481071644931.2463
[2025-11-22 05:30:05] 2025-11-22 10:29:29,370 | INFO     | time since job start (105047s) is within the limit (172800.0s)
[2025-11-22 05:30:05] 2025-11-22 10:29:29,947 | INFO     | sum of deviations: 7033296431367.482
[2025-11-22 05:30:05] 2025-11-22 10:29:29,948 | INFO     | mean x: 1763755599.7482185
[2025-11-22 05:30:05] 2025-11-22 10:29:29,948 | INFO     | mean y: 3183496.741686461
[2025-11-22 05:30:05] 2025-11-22 10:29:29,948 | INFO     | intersect: -8372519331.658231
[2025-11-22 05:30:05] 2025-11-22 10:29:29,979 | INFO     | chi2: 1.8303663377686947
[2025-11-22 05:30:05] 2025-11-22 10:29:29,979 | INFO     | current memory leak: 4.75 B/s (using 1684 data points, chi2=1.83)
[2025-11-22 05:30:05] 2025-11-22 10:29:30,013 | INFO     | could have reported an average CPU frequency of 2614 MHz (61 samples)
[2025-11-22 05:30:05] 2025-11-22 10:29:30,013 | INFO     | ..............................
[2025-11-22 05:30:05] 2025-11-22 10:29:30,013 | INFO     | . Timing measurements:
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . get job = 0 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . initial setup = 5 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . payload setup = 34 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . stage-in = 0 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . payload execution = 104931 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . stage-out = 10 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | . log creation = 2 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,014 | INFO     | ..............................
[2025-11-22 05:30:05] 2025-11-22 10:29:30,712 | INFO     | 
[2025-11-22 05:30:05] 2025-11-22 10:29:30,712 | INFO     | job summary report
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | --------------------------------------------------
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | PanDA job id: 6893850362
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | task id: 47523449
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | errors: (none)
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | pilot state: finished 
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | transexitcode: 0
[2025-11-22 05:30:05] 2025-11-22 10:29:30,713 | INFO     | exeerrorcode: 0
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | exeerrordiag: 
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | exitcode: 0
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | exitmsg: OK
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | cpuconsumptiontime: 332338 s
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | nevents: 1000
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | neventsw: 0
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | pid: 2347191
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | pgrp: 2347191
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | corecount: 9
[2025-11-22 05:30:05] 2025-11-22 10:29:30,714 | INFO     | event service: False
[2025-11-22 05:30:05] 2025-11-22 10:29:30,715 | INFO     | sizes: {0: 2297979, 1: 2298835, 2: 2298863, 13: 2298863, 24: 2298919, 28: 2299209, 35: 2299365, 104970: 2373462, 104981: 2382484, 104983: 2382540, 104993: 2382786}
[2025-11-22 05:30:05] 2025-11-22 10:29:30,715 | INFO     | --------------------------------------------------
[2025-11-22 05:30:05] 2025-11-22 10:29:30,715 | INFO     | 
[2025-11-22 05:30:05] 2025-11-22 10:29:30,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 05:30:05] 2025-11-22 10:29:30,746 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,746 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 05:30:05] 2025-11-22 10:29:30,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 05:30:05] 2025-11-22 10:29:30,753 | INFO     | job 6893850362 has completed (purged errors)
[2025-11-22 05:30:05] 2025-11-22 10:29:30,754 | INFO     | overall cleanup function is called
[2025-11-22 05:30:05] 2025-11-22 10:29:31,788 | INFO     | --- collectZombieJob: --- 10, [2347191]
[2025-11-22 05:30:05] 2025-11-22 10:29:31,788 | INFO     | zombie collector waiting for pid 2347191
[2025-11-22 05:30:05] 2025-11-22 10:29:31,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 05:30:05] 2025-11-22 10:29:31,788 | INFO     | collected zombie processes
[2025-11-22 05:30:05] 2025-11-22 10:29:31,788 | INFO     | will attempt to kill all subprocesses of pid=2347191
[2025-11-22 05:30:05] 2025-11-22 10:29:32,506 | INFO     | process IDs to be killed: [2347191] (in reverse order)
[2025-11-22 05:30:05] 2025-11-22 10:29:32,621 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 05:30:05] 2025-11-22 10:29:32,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 05:30:05] 2025-11-22 10:29:32,642 | INFO     | did not find any defunct processes belonging to 2347191
[2025-11-22 05:30:05] 2025-11-22 10:29:32,662 | INFO     | did not find any defunct processes belonging to 2347191
[2025-11-22 05:30:05] 2025-11-22 10:29:32,669 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 05:30:05] 2025-11-22 10:29:32,669 | INFO     | ready for new job
[2025-11-22 05:30:05] 2025-11-22 10:29:32,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 05:30:05] 2025-11-22 10:29:32,687 | INFO     | ***************************************
[2025-11-22 05:30:05] 2025-11-22 10:29:32,688 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 05:30:05] 2025-11-22 10:29:32,688 | INFO     | ***************************************
[2025-11-22 05:30:05] 2025-11-22 10:29:32,688 | INFO     | 
[2025-11-22 05:30:05] 2025-11-22 10:29:32,694 | INFO     | architecture information:
[2025-11-22 05:30:05] 2025-11-22 10:29:32,695 | INFO     | executing command: cat /etc/os-release
[2025-11-22 05:30:05] 2025-11-22 10:29:32,719 | INFO     | cat /etc/os-release:
[2025-11-22 05:30:05] NAME="CentOS Linux"
[2025-11-22 05:30:05] VERSION="7 (Core)"
[2025-11-22 05:30:05] ID="centos"
[2025-11-22 05:30:05] ID_LIKE="rhel fedora"
[2025-11-22 05:30:05] VERSION_ID="7"
[2025-11-22 05:30:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 05:30:05] ANSI_COLOR="0;31"
[2025-11-22 05:30:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 05:30:05] HOME_URL="https://www.centos.org/"
[2025-11-22 05:30:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 05:30:05] 
[2025-11-22 05:30:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 05:30:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 05:30:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 05:30:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 05:30:05] 
[2025-11-22 05:30:05] 2025-11-22 10:29:32,720 | INFO     | ***************************************
[2025-11-22 05:30:05] 2025-11-22 10:29:33,224 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 05:30:05] 2025-11-22 10:29:33,243 | INFO     | sufficient remaining disk space (59399733248 B)
[2025-11-22 05:30:05] 2025-11-22 10:29:33,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 05:30:05] 2025-11-22 10:29:33,244 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 05:30:05] 2025-11-22 10:29:33,244 | INFO     | update_server=False
[2025-11-22 05:30:05] 2025-11-22 10:29:33,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 05:30:05] 2025-11-22 10:29:33,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 05:30:05] 2025-11-22 10:29:33,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 05:30:05] 2025-11-22 10:29:33,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 05:30:05] 2025-11-22 10:29:33,396 | INFO     | will abort loop
[2025-11-22 05:30:05] 2025-11-22 10:29:33,574 | INFO     | all job control threads have been joined
[2025-11-22 05:30:05] 2025-11-22 10:29:33,790 | INFO     | all payload control threads have been joined
[2025-11-22 05:30:05] 2025-11-22 10:29:34,209 | INFO     | all data control threads have been joined
[2025-11-22 05:30:05] 2025-11-22 10:29:34,251 | INFO     | [job] retrieve thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:34,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 05:30:05] 2025-11-22 10:29:34,403 | INFO     | [job] job monitor thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:34,576 | INFO     | [job] validate thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:34,580 | INFO     | [job] control thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:34,679 | INFO     | [payload] validate_post thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:34,796 | INFO     | [payload] control thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,215 | INFO     | [data] control thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 05:30:05] 2025-11-22 10:29:35,448 | INFO     | [payload] failed_post thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,537 | INFO     | [data] copytool_in thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,546 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,558 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,721 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:35,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 05:30:05] 2025-11-22 10:29:36,395 | INFO     | [data] copytool_out thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:36,732 | INFO     | [job] queue monitor thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:39,251 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 05:30:05] 2025-11-22 10:29:52,267 | INFO     | [monitor] cgroup control has ended
[2025-11-22 05:30:05] 2025-11-22 10:29:53,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615659296576)>', '<ExcThread(monitor, started 140614771386112)>']
[2025-11-22 05:30:05] 2025-11-22 10:29:58,306 | INFO     | all workflow threads have been joined
[2025-11-22 05:30:05] 2025-11-22 10:29:58,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 05:30:05] 2025-11-22 10:29:58,306 | INFO     | traces error code: 0
[2025-11-22 05:30:05] 2025-11-22 10:29:58,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 05:30:05] 2025-11-22 10:30:04,510 | INFO     | PID=2338207 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 05:30:05] 2025-11-22 10:30:04,511 | INFO     | .. there are 17 such processes running
[2025-11-22 05:30:05] 2025-11-22 10:30:04,511 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 05:30:05] 2025-11-22 10:30:04,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 05:30:05] 2025-11-22 10:30:04,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 05:30:05] 2025-11-22 10:30:04,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 05:30:05] 2025-11-22 10:30:04,511 | INFO     | [monitor] control thread has ended
[2025-11-22 05:30:05] 2025-11-22 10:30:04,693 [wrapper] ==== pilot stdout END ====
[2025-11-22 05:30:05] 2025-11-22 10:30:04,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 05:30:05] 2025-11-22 10:30:04,750 [wrapper] pilotpid: 2338207
[2025-11-22 05:30:05] 2025-11-22 10:30:04,759 [wrapper] Pilot exit status: 0
[2025-11-22 05:30:05] 2025-11-22 10:30:04,794 [wrapper] pandaids: 6893850362
[2025-11-22 05:30:05] 2025-11-22 10:30:04,855 [wrapper] cleanup supervisor_pilot 1140355 2338208
[2025-11-22 05:30:05] 2025-11-22 10:30:04,858 [wrapper] Test setup, not cleaning
[2025-11-22 05:30:05] 2025-11-22 10:30:04,864 [wrapper] apfmon messages muted
[2025-11-22 05:30:05] 2025-11-22 10:30:04,869 [wrapper] ==== wrapper stdout END ====
[2025-11-22 05:30:05] 2025-11-22 10:30:04,883 [wrapper] ==== wrapper stderr END ====
[2025-11-22 05:30:05]  *** Error codes and diagnostics ***
[2025-11-22 05:30:05]     "exeErrorCode": 0,
[2025-11-22 05:30:05]     "exeErrorDiag": "",
[2025-11-22 05:30:05]     "pilotErrorCode": 0,
[2025-11-22 05:30:05]     "pilotErrorDiag": "",
[2025-11-22 05:30:05]  *** Listing of results directory ***
[2025-11-22 05:30:05] total 1331804
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-22 05:30:05] -rwx------. 1 boincer umatlas     36292 Nov 20 06:23 runpilot2-wrapper.sh
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:23 queuedata.json
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 05:30:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:17 run_atlas
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:17 job.xml
[2025-11-22 05:30:05] -rw-r--r--. 2 boincer umatlas 409179113 Nov 21 00:17 EVNT.47493127._000332.pool.root.1
[2025-11-22 05:30:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:17 start_atlas.sh
[2025-11-22 05:30:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:17 shared
[2025-11-22 05:30:05] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 00:17 input.tar.gz
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:17 boinc_lockfile
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 00:17 pandaJob.out
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas        57 Nov 21 00:17 setup.sh.local
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas    989817 Nov 21 00:18 agis_schedconf.cvmfs.json
[2025-11-22 05:30:05] drwx------. 5 boincer umatlas      4096 Nov 21 00:18 pilot3
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas       533 Nov 22 05:14 boinc_task_state.xml
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas 918279364 Nov 22 05:28 HITS.47523449._003314.pool.root.1
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas      1067 Nov 22 05:29 memory_monitor_summary.json
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas        95 Nov 22 05:29 pilot_heartbeat.json
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas   1526164 Nov 22 05:29 agis_ddmendpoints.agis.ALL.json
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas   2789947 Nov 22 05:29 log.47523449._003314.job.log.tgz.1
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas      8635 Nov 22 05:29 heartbeat.json
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas      6613 Nov 22 05:30 init_data.xml
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 05:30 boinc_mmap_file
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas        29 Nov 22 05:30 wrapper_checkpoint.txt
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas       823 Nov 22 05:30 pilotlog.txt
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas  13398576 Nov 22 05:30 log.47523449._003314.job.log.1
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas       353 Nov 22 05:30 output.list
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas       620 Nov 22 05:30 runtime_log
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas  16209920 Nov 22 05:30 result.tar.gz
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas      9339 Nov 22 05:30 runtime_log.err
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas       664 Nov 22 05:30 6FyMDmtvHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxWGKDmd9lign.diag
[2025-11-22 05:30:05] -rw-r--r--. 1 boincer umatlas     21372 Nov 22 05:30 stderr.txt
[2025-11-22 05:30:05] HITS file was successfully produced:
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas 918279364 Nov 22 05:28 shared/HITS.pool.root.1
[2025-11-22 05:30:05]  *** Contents of shared directory: ***
[2025-11-22 05:30:05] total 1312788
[2025-11-22 05:30:05] -rw-r--r--. 2 boincer umatlas 409179113 Nov 21 00:17 ATLAS.root_0
[2025-11-22 05:30:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:17 start_atlas.sh
[2025-11-22 05:30:05] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 00:17 input.tar.gz
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas 918279364 Nov 22 05:28 HITS.pool.root.1
[2025-11-22 05:30:05] -rw-------. 1 boincer umatlas  16209920 Nov 22 05:30 result.tar.gz
05:30:06 (2334076): run_atlas exited; CPU time 335299.772513
05:30:06 (2334076): called boinc_finish(0)

</stderr_txt>
]]>

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