Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:53:29 (1566115): wrapper (7.7.26015): starting
06:53:29 (1566115): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 06:53:29] Arguments: --nthreads 4
[2025-11-23 06:53:29] Threads: 4
[2025-11-23 06:53:29] Checking for CVMFS
[2025-11-23 06:53:29] No cvmfs_config command found, will try listing directly
[2025-11-23 06:53:29] CVMFS is ok
[2025-11-23 06:53:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:53:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:53:29] Further information can be found at the LHC@home message board.
[2025-11-23 06:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:53:29] Checking for apptainer binary...
[2025-11-23 06:53:29] which: no apptainer in ((null))
[2025-11-23 06:53:29] apptainer is not installed, using version from CVMFS
[2025-11-23 06:53:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:53:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-23 06:53:29] apptainer works
[2025-11-23 06:53:29] Set ATHENA_PROC_NUMBER=4
[2025-11-23 06:53:29] Set ATHENA_CORE_NUMBER=4
[2025-11-23 06:53:29] Starting ATLAS job with PandaID=6893878592
[2025-11-23 06:53:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:23:21]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:23:21] 2025-11-23 21:15:12,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:23:21] 2025-11-23 21:15:13,590 | INFO     | time since job start (55290s) is within the limit (172800.0s)
[2025-11-23 22:23:21] 2025-11-23 21:15:14,870 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 22:23:21] 2025-11-23 21:15:14,891 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2719.1343828125027
[2025-11-23 22:23:21] 2025-11-23 21:15:14,915 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6893878592/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:23:21] 2025-11-23 21:15:14,916 | INFO     | extracted standard info from prmon json
[2025-11-23 22:23:21] 2025-11-23 21:15:14,916 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:23:21] 2025-11-23 21:15:14,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:23:21] 2025-11-23 21:15:14,932 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:23:21] 2025-11-23 21:15:14,933 | INFO     | sum of square deviations: 230601981760.28375
[2025-11-23 22:23:21] 2025-11-23 21:15:14,951 | INFO     | sum of deviations: 635623276126.5839
[2025-11-23 22:23:21] 2025-11-23 21:15:14,951 | INFO     | mean x: 1763904859.5154526
[2025-11-23 22:23:21] 2025-11-23 21:15:14,952 | INFO     | mean y: 2269328.7439293596
[2025-11-23 22:23:21] 2025-11-23 21:15:14,952 | INFO     | intersect: -4859696631.05561
[2025-11-23 22:23:21] 2025-11-23 21:15:14,953 | INFO     | chi2: 3.658871784512048
[2025-11-23 22:23:21] 2025-11-23 21:15:14,954 | INFO     | sum of square deviations: 226805105537.78244
[2025-11-23 22:23:21] 2025-11-23 21:15:14,971 | INFO     | sum of deviations: 794512007030.3478
[2025-11-23 22:23:21] 2025-11-23 21:15:14,971 | INFO     | mean x: 1763904707.0155382
[2025-11-23 22:23:21] 2025-11-23 21:15:14,971 | INFO     | mean y: 2275701.0466148723
[2025-11-23 22:23:21] 2025-11-23 21:15:14,971 | INFO     | intersect: -6176789208.705749
[2025-11-23 22:23:21] 2025-11-23 21:15:14,972 | INFO     | chi2: 1.8167219738044944
[2025-11-23 22:23:21] 2025-11-23 21:15:14,972 | INFO     | current chi2=1.8167219738044944 (change=50.34748193433144 %)
[2025-11-23 22:23:21] 2025-11-23 21:15:14,973 | INFO     | sum of square deviations: 223050137077.78125
[2025-11-23 22:23:21] 2025-11-23 21:15:14,992 | INFO     | sum of deviations: 785958889817.6254
[2025-11-23 22:23:21] 2025-11-23 21:15:14,992 | INFO     | mean x: 1763904554.515625
[2025-11-23 22:23:21] 2025-11-23 21:15:14,992 | INFO     | mean y: 2275353.6696428573
[2025-11-23 22:23:21] 2025-11-23 21:15:14,992 | INFO     | intersect: -6213172363.934353
[2025-11-23 22:23:21] 2025-11-23 21:15:14,993 | INFO     | chi2: 1.81614480059357
[2025-11-23 22:23:21] 2025-11-23 21:15:14,993 | INFO     | current chi2=1.81614480059357 (change=0.031770035219843284 %)
[2025-11-23 22:23:21] 2025-11-23 21:15:14,993 | INFO     | right removable region: 895
[2025-11-23 22:23:21] 2025-11-23 21:15:14,994 | INFO     | sum of square deviations: 226805096997.78235
[2025-11-23 22:23:21] 2025-11-23 21:15:15,012 | INFO     | sum of deviations: 489067347268.6433
[2025-11-23 22:23:21] 2025-11-23 21:15:15,012 | INFO     | mean x: 1763905012.0155382
[2025-11-23 22:23:21] 2025-11-23 21:15:15,012 | INFO     | mean y: 2275201.2397336294
[2025-11-23 22:23:21] 2025-11-23 21:15:15,012 | INFO     | intersect: -3801291634.2478247
[2025-11-23 22:23:21] 2025-11-23 21:15:15,013 | INFO     | chi2: 1.9499458135141645
[2025-11-23 22:23:21] 2025-11-23 21:15:15,013 | INFO     | current chi2=1.9499458135141645 (change=46.706363918838115 %)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,014 | INFO     | sum of square deviations: 223050119997.78125
[2025-11-23 22:23:21] 2025-11-23 21:15:15,032 | INFO     | sum of deviations: 477942429105.7495
[2025-11-23 22:23:21] 2025-11-23 21:15:15,032 | INFO     | mean x: 1763905164.515625
[2025-11-23 22:23:21] 2025-11-23 21:15:15,032 | INFO     | mean y: 2275652.589285714
[2025-11-23 22:23:21] 2025-11-23 21:15:15,032 | INFO     | intersect: -3777346250.546927
[2025-11-23 22:23:21] 2025-11-23 21:15:15,033 | INFO     | chi2: 1.949088041378269
[2025-11-23 22:23:21] 2025-11-23 21:15:15,033 | INFO     | current chi2=1.949088041378269 (change=0.043989537039990194 %)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,034 | INFO     | left removable region: 20
[2025-11-23 22:23:21] 2025-11-23 21:15:15,035 | INFO     | sum of square deviations: 207731619681.77585
[2025-11-23 22:23:21] 2025-11-23 21:15:15,051 | INFO     | sum of deviations: 620843632667.889
[2025-11-23 22:23:21] 2025-11-23 21:15:15,051 | INFO     | mean x: 1763905134.016
[2025-11-23 22:23:21] 2025-11-23 21:15:15,051 | INFO     | mean y: 2281999.4365714286
[2025-11-23 22:23:21] 2025-11-23 21:15:15,051 | INFO     | intersect: -5269468506.151511
[2025-11-23 22:23:21] 2025-11-23 21:15:15,052 | INFO     | chi2: 0.0884053752205106
[2025-11-23 22:23:21] 2025-11-23 21:15:15,053 | INFO     | current memory leak: 2.99 B/s (using 875 data points, chi2=0.09)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,053 | INFO     | could have reported an average CPU frequency of 2704 MHz (34 samples)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | ..............................
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . Timing measurements:
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . get job = 0 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . initial setup = 1 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . payload setup = 8 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . stage-in = 0 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . payload execution = 55250 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . stage-out = 2 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | . log creation = 0 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,054 | INFO     | ..............................
[2025-11-23 22:23:21] 2025-11-23 21:15:15,153 | INFO     | 
[2025-11-23 22:23:21] 2025-11-23 21:15:15,154 | INFO     | job summary report
[2025-11-23 22:23:21] 2025-11-23 21:15:15,154 | INFO     | --------------------------------------------------
[2025-11-23 22:23:21] 2025-11-23 21:15:15,154 | INFO     | PanDA job id: 6893878592
[2025-11-23 22:23:21] 2025-11-23 21:15:15,154 | INFO     | task id: 47523449
[2025-11-23 22:23:21] 2025-11-23 21:15:15,154 | INFO     | errors: (none)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | pilot state: finished 
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | transexitcode: 0
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | exeerrorcode: 0
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | exeerrordiag: 
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | exitcode: 0
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | exitmsg: OK
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | cpuconsumptiontime: 218976 s
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | nevents: 1000
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | neventsw: 0
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | pid: 1577628
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | pgrp: 1577628
[2025-11-23 22:23:21] 2025-11-23 21:15:15,155 | INFO     | corecount: 4
[2025-11-23 22:23:21] 2025-11-23 21:15:15,156 | INFO     | event service: False
[2025-11-23 22:23:21] 2025-11-23 21:15:15,156 | INFO     | sizes: {0: 2298717, 7: 2298979, 11: 2299007, 55263: 2350428, 55264: 2350427, 55267: 2359501, 55268: 2359685, 55274: 2359931}
[2025-11-23 22:23:21] 2025-11-23 21:15:15,156 | INFO     | --------------------------------------------------
[2025-11-23 22:23:21] 2025-11-23 21:15:15,156 | INFO     | 
[2025-11-23 22:23:21] 2025-11-23 21:15:15,156 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-11-23 22:23:21] 2025-11-23 21:15:15,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | job 6893878592 has completed (purged errors)
[2025-11-23 22:23:21] 2025-11-23 21:15:15,187 | INFO     | overall cleanup function is called
[2025-11-23 22:23:21] 2025-11-23 21:15:16,202 | INFO     | --- collectZombieJob: --- 10, [1577628]
[2025-11-23 22:23:21] 2025-11-23 21:15:16,203 | INFO     | zombie collector waiting for pid 1577628
[2025-11-23 22:23:21] 2025-11-23 21:15:16,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:23:21] 2025-11-23 21:15:16,203 | INFO     | collected zombie processes
[2025-11-23 22:23:21] 2025-11-23 21:15:16,203 | INFO     | will attempt to kill all subprocesses of pid=1577628
[2025-11-23 22:23:21] 2025-11-23 21:15:16,923 | INFO     | process IDs to be killed: [1577628] (in reverse order)
[2025-11-23 22:23:21] 2025-11-23 21:15:17,165 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:23:21] 2025-11-23 21:15:17,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:23:21] 2025-11-23 21:15:17,197 | INFO     | did not find any defunct processes belonging to 1577628
[2025-11-23 22:23:21] 2025-11-23 21:15:17,228 | INFO     | did not find any defunct processes belonging to 1577628
[2025-11-23 22:23:21] 2025-11-23 21:15:17,230 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:23:21] 2025-11-23 21:15:17,230 | INFO     | ready for new job
[2025-11-23 22:23:21] 2025-11-23 21:15:17,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:23:21] 2025-11-23 21:15:17,237 | INFO     | ***************************************
[2025-11-23 22:23:21] 2025-11-23 21:15:17,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:23:21] 2025-11-23 21:15:17,237 | INFO     | ***************************************
[2025-11-23 22:23:21] 2025-11-23 21:15:17,237 | INFO     | 
[2025-11-23 22:23:21] 2025-11-23 21:15:17,246 | INFO     | architecture information:
[2025-11-23 22:23:21] 2025-11-23 21:15:17,251 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:23:21] 2025-11-23 21:15:17,276 | INFO     | cat /etc/os-release:
[2025-11-23 22:23:21] NAME="CentOS Linux"
[2025-11-23 22:23:21] VERSION="7 (Core)"
[2025-11-23 22:23:21] ID="centos"
[2025-11-23 22:23:21] ID_LIKE="rhel fedora"
[2025-11-23 22:23:21] VERSION_ID="7"
[2025-11-23 22:23:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:23:21] ANSI_COLOR="0;31"
[2025-11-23 22:23:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:23:21] HOME_URL="https://www.centos.org/"
[2025-11-23 22:23:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:23:21] 
[2025-11-23 22:23:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:23:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:23:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:23:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:23:21] 
[2025-11-23 22:23:21] 2025-11-23 21:15:17,276 | INFO     | ***************************************
[2025-11-23 22:23:21] 2025-11-23 21:15:17,779 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-11-23 22:23:21] 2025-11-23 21:15:17,801 | INFO     | sufficient remaining disk space (3324249112576 B)
[2025-11-23 22:23:21] 2025-11-23 21:15:17,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:23:21] 2025-11-23 21:15:17,802 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:23:21] 2025-11-23 21:15:17,802 | INFO     | update_server=False
[2025-11-23 22:23:21] 2025-11-23 21:15:17,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:23:21] 2025-11-23 21:15:18,017 | INFO     | all data control threads have been joined
[2025-11-23 22:23:21] 2025-11-23 21:15:18,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:23:21] 2025-11-23 21:15:18,640 | INFO     | all payload control threads have been joined
[2025-11-23 22:23:21] 2025-11-23 21:15:18,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:23:21] 2025-11-23 21:15:18,742 | INFO     | aborting loop
[2025-11-23 22:23:21] 2025-11-23 21:15:18,807 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:18,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:23:21] 2025-11-23 21:15:19,023 | INFO     | [data] control thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,139 | INFO     | all job control threads have been joined
[2025-11-23 22:23:21] 2025-11-23 21:15:19,179 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,646 | INFO     | [payload] control thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,723 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,732 | INFO     | [job] validate thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,747 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,784 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:19,867 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:20,060 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:20,127 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:20,145 | INFO     | [job] control thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:20,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:23:21] 2025-11-23 21:15:20,233 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:21,167 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:22,948 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:28,416 | INFO     | job.realtimelogging is not enabled
[2025-11-23 22:23:21] 2025-11-23 21:15:29,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:23:21] 2025-11-23 21:15:47,617 | INFO     | PID=1570136 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 22:23:21] 2025-11-23 21:15:47,617 | INFO     | .. there are 8 such processes running
[2025-11-23 22:23:21] 2025-11-23 21:15:47,618 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:23:21] 2025-11-23 21:15:47,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:23:21] 2025-11-23 21:15:47,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:23:21] 2025-11-23 21:16:13,674 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:23:21] 2025-11-23 21:16:13,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22445181269824)>', '<ExcThread(monitor, started 22444939110144)>']
[2025-11-23 22:23:21] 2025-11-23 21:16:14,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:23:21] 2025-11-23 21:16:14,754 | INFO     | [monitor] control thread has ended
[2025-11-23 22:23:21] 2025-11-23 21:16:18,885 | INFO     | all workflow threads have been joined
[2025-11-23 22:23:21] 2025-11-23 21:16:18,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:23:21] 2025-11-23 21:16:18,886 | INFO     | traces error code: 0
[2025-11-23 22:23:21] 2025-11-23 21:16:18,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:23:21] 2025-11-23 21:16:19,053 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:23:21] 2025-11-23 21:16:19,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:23:21] 2025-11-23 21:16:19,061 [wrapper] pilotpid: 1570136
[2025-11-23 22:23:21] 2025-11-23 21:16:19,065 [wrapper] Pilot exit status: 0
[2025-11-23 22:23:21] 2025-11-23 21:16:19,079 [wrapper] pandaids: 6893878592
[2025-11-23 22:23:21] 2025-11-23 21:16:19,238 [wrapper] cleanup supervisor_pilot 2965133 1570137
[2025-11-23 22:23:21] 2025-11-23 21:16:19,243 [wrapper] Test setup, not cleaning
[2025-11-23 22:23:21] 2025-11-23 21:16:19,247 [wrapper] apfmon messages muted
[2025-11-23 22:23:21] 2025-11-23 21:16:19,252 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:23:21] 2025-11-23 21:16:19,255 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:23:21]  *** Error codes and diagnostics ***
[2025-11-23 22:23:21]     "exeErrorCode": 0,
[2025-11-23 22:23:21]     "exeErrorDiag": "",
[2025-11-23 22:23:21]     "pilotErrorCode": 0,
[2025-11-23 22:23:21]     "pilotErrorDiag": "",
[2025-11-23 22:23:21]  *** Listing of results directory ***
[2025-11-23 22:23:21] total 1309004
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc    576529 Nov 20 19:04 pilot3.tar.gz
[2025-11-23 22:23:21] -rwx------ 1 boinc boinc     36292 Nov 20 19:45 runpilot2-wrapper.sh
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc      5112 Nov 20 19:45 queuedata.json
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc       100 Nov 23 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:23:21] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 06:53 run_atlas
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc       105 Nov 23 06:53 job.xml
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc      6689 Nov 23 06:53 init_data.xml
[2025-11-23 22:23:21] -rw-r--r-- 2 boinc boinc 408034089 Nov 23 06:53 EVNT.47493127._000805.pool.root.1
[2025-11-23 22:23:21] -rw-r--r-- 2 boinc boinc     15847 Nov 23 06:53 start_atlas.sh
[2025-11-23 22:23:21] drwxrwx--x 2 boinc boinc      4096 Nov 23 06:53 shared
[2025-11-23 22:23:21] -rw-r--r-- 2 boinc boinc    590098 Nov 23 06:53 input.tar.gz
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc         0 Nov 23 06:53 boinc_lockfile
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc      2784 Nov 23 06:53 pandaJob.out
[2025-11-23 22:23:21] -rw------- 1 boinc boinc    989784 Nov 23 06:53 agis_schedconf.cvmfs.json
[2025-11-23 22:23:21] drwx------ 5 boinc boinc      4096 Nov 23 06:53 pilot3
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc       532 Nov 23 22:09 boinc_task_state.xml
[2025-11-23 22:23:21] -rw------- 1 boinc boinc 909904458 Nov 23 22:14 HITS.47523449._008045.pool.root.1
[2025-11-23 22:23:21] -rw------- 1 boinc boinc      1039 Nov 23 22:15 memory_monitor_summary.json
[2025-11-23 22:23:21] -rw------- 1 boinc boinc   1526164 Nov 23 22:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:23:21] -rw------- 1 boinc boinc   1655775 Nov 23 22:15 log.47523449._008045.job.log.tgz.1
[2025-11-23 22:23:21] -rw------- 1 boinc boinc      7925 Nov 23 22:15 heartbeat.json
[2025-11-23 22:23:21] -rw------- 1 boinc boinc        95 Nov 23 22:15 pilot_heartbeat.json
[2025-11-23 22:23:21] -rw------- 1 boinc boinc      4908 Nov 23 22:16 pilotlog.txt
[2025-11-23 22:23:21] -rw------- 1 boinc boinc   7627840 Nov 23 22:16 log.47523449._008045.job.log.1
[2025-11-23 22:23:21] -rw------- 1 boinc boinc       353 Nov 23 22:16 output.list
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc       620 Nov 23 22:16 runtime_log
[2025-11-23 22:23:21] -rw------- 1 boinc boinc   9297920 Nov 23 22:16 result.tar.gz
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc      9223 Nov 23 22:16 runtime_log.err
[2025-11-23 22:23:21] -rw------- 1 boinc boinc       670 Nov 23 22:16 C1GMDmIqOg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfxGKDm3o1Bxm.diag
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc        28 Nov 23 22:23 wrapper_checkpoint.txt
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc      8192 Nov 23 22:23 boinc_mmap_file
[2025-11-23 22:23:21] -rw-r--r-- 1 boinc boinc     21106 Nov 23 22:23 stderr.txt
[2025-11-23 22:23:21] HITS file was successfully produced:
[2025-11-23 22:23:21] -rw------- 1 boinc boinc 909904458 Nov 23 22:14 shared/HITS.pool.root.1
[2025-11-23 22:23:21]  *** Contents of shared directory: ***
[2025-11-23 22:23:21] total 1296736
[2025-11-23 22:23:21] -rw-r--r-- 2 boinc boinc 408034089 Nov 23 06:53 ATLAS.root_0
[2025-11-23 22:23:21] -rw-r--r-- 2 boinc boinc     15847 Nov 23 06:53 start_atlas.sh
[2025-11-23 22:23:21] -rw-r--r-- 2 boinc boinc    590098 Nov 23 06:53 input.tar.gz
[2025-11-23 22:23:21] -rw------- 1 boinc boinc 909904458 Nov 23 22:14 HITS.pool.root.1
[2025-11-23 22:23:21] -rw------- 1 boinc boinc   9297920 Nov 23 22:16 result.tar.gz
22:23:22 (1566115): run_atlas exited; CPU time 221698.852059
22:23:22 (1566115): called boinc_finish(0)

</stderr_txt>
]]>

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