Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:41 (3176928): wrapper (7.7.26015): starting
00:02:41 (3176928): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:02:41] Arguments: --nthreads 9
[2025-11-23 00:02:41] Threads: 9
[2025-11-23 00:02:41] Checking for CVMFS
[2025-11-23 00:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:02:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:02:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:02:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:02:43] 2.13.3.0 9428 23589 335648 153197 3 570 16529209 18491393 22163 16776704 0 119644312 99.331 192537369 33561 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:02:43] CVMFS is ok
[2025-11-23 00:02:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:02:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:02:43] Further information can be found at the LHC@home message board.
[2025-11-23 00:02:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:02:43] Checking for apptainer binary...
[2025-11-23 00:02:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:02:43] Running /usr/bin/apptainer --version
[2025-11-23 00:02:43] apptainer version 1.4.4-1.el9
[2025-11-23 00:02:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:02:44] c-8-38.aglt2.org
[2025-11-23 00:02:44] apptainer works
[2025-11-23 00:02:44] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:02:44] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:02:44] Starting ATLAS job with PandaID=6893852862
[2025-11-23 00:02:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:36:43]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:36:43] 2025-11-24 15:35:36,986 | INFO     | time since job start (124318s) is within the limit (172800.0s)
[2025-11-24 10:36:43] 2025-11-24 15:35:38,647 | INFO     | monitor loop #7112: job 0:6893852862 is in state 'finished'
[2025-11-24 10:36:43] 2025-11-24 15:35:38,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:36:43] 2025-11-24 15:35:38,993 | INFO     | time since job start (124320s) is within the limit (172800.0s)
[2025-11-24 10:36:43] 2025-11-24 15:35:41,005 | INFO     | time since job start (124323s) is within the limit (172800.0s)
[2025-11-24 10:36:43] 2025-11-24 15:35:41,153 | INFO     | monitor loop #7113: job 0:6893852862 is in state 'finished'
[2025-11-24 10:36:43] 2025-11-24 15:35:41,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:36:43] 2025-11-24 15:35:42,950 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 10:36:43] 2025-11-24 15:35:42,964 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2514750000005
[2025-11-24 10:36:43] 2025-11-24 15:35:42,981 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893852862/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:36:43] 2025-11-24 15:35:42,986 | INFO     | extracted standard info from prmon json
[2025-11-24 10:36:43] 2025-11-24 15:35:42,986 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:36:43] 2025-11-24 15:35:42,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:36:43] 2025-11-24 15:35:43,061 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:36:43] 2025-11-24 15:35:43,069 | INFO     | sum of square deviations: 2616874986035.389
[2025-11-24 10:36:43] 2025-11-24 15:35:43,106 | INFO     | time since job start (124325s) is within the limit (172800.0s)
[2025-11-24 10:36:43] 2025-11-24 15:35:43,359 | INFO     | sum of deviations: 12118460933031.357
[2025-11-24 10:36:43] 2025-11-24 15:35:43,364 | INFO     | mean x: 1763936392.9430256
[2025-11-24 10:36:43] 2025-11-24 15:35:43,364 | INFO     | mean y: 3034145.184184676
[2025-11-24 10:36:43] 2025-11-24 15:35:43,364 | INFO     | intersect: -8165561748.889307
[2025-11-24 10:36:43] 2025-11-24 15:35:43,367 | INFO     | chi2: 11.594472147628574
[2025-11-24 10:36:43] 2025-11-24 15:35:43,374 | INFO     | sum of square deviations: 2597643007570.4775
[2025-11-24 10:36:43] 2025-11-24 15:35:43,519 | INFO     | sum of deviations: 12803944487569.084
[2025-11-24 10:36:43] 2025-11-24 15:35:43,520 | INFO     | mean x: 1763936240.44904
[2025-11-24 10:36:43] 2025-11-24 15:35:43,520 | INFO     | mean y: 3039580.8705071392
[2025-11-24 10:36:43] 2025-11-24 15:35:43,520 | INFO     | intersect: -8691512224.939186
[2025-11-24 10:36:43] 2025-11-24 15:35:43,522 | INFO     | chi2: 8.70554292416059
[2025-11-24 10:36:43] 2025-11-24 15:35:43,523 | INFO     | current chi2=8.70554292416059 (change=24.91643592467346 %)
[2025-11-24 10:36:43] 2025-11-24 15:35:43,523 | INFO     | right removable region: 2030
[2025-11-24 10:36:43] 2025-11-24 15:35:43,525 | INFO     | sum of square deviations: 2597639973430.4727
[2025-11-24 10:36:43] 2025-11-24 15:35:43,673 | INFO     | sum of deviations: 11284457102628.422
[2025-11-24 10:36:43] 2025-11-24 15:35:43,674 | INFO     | mean x: 1763936545.44904
[2025-11-24 10:36:43] 2025-11-24 15:35:43,674 | INFO     | mean y: 3040757.289020187
[2025-11-24 10:36:43] 2025-11-24 15:35:43,674 | INFO     | intersect: -7659709463.093293
[2025-11-24 10:36:43] 2025-11-24 15:35:43,677 | INFO     | chi2: 7.765044190437098
[2025-11-24 10:36:43] 2025-11-24 15:35:43,677 | INFO     | current chi2=7.765044190437098 (change=33.02804912921122 %)
[2025-11-24 10:36:43] 2025-11-24 15:35:43,680 | INFO     | sum of square deviations: 2578499922304.5474
[2025-11-24 10:36:43] 2025-11-24 15:35:43,691 | INFO     | monitor loop #7114: job 0:6893852862 is in state 'finished'
[2025-11-24 10:36:43] 2025-11-24 15:35:43,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:36:43] 2025-11-24 15:35:43,862 | INFO     | sum of deviations: 10794431585745.945
[2025-11-24 10:36:43] 2025-11-24 15:35:43,863 | INFO     | mean x: 1763936697.9531095
[2025-11-24 10:36:43] 2025-11-24 15:35:43,863 | INFO     | mean y: 3044660.1786771966
[2025-11-24 10:36:43] 2025-11-24 15:35:43,863 | INFO     | intersect: -7381362778.788291
[2025-11-24 10:36:43] 2025-11-24 15:35:43,874 | INFO     | chi2: 6.520562974916599
[2025-11-24 10:36:43] 2025-11-24 15:35:43,874 | INFO     | current chi2=6.520562974916599 (change=16.026711310324767 %)
[2025-11-24 10:36:43] 2025-11-24 15:35:43,874 | INFO     | left removable region: 20
[2025-11-24 10:36:43] 2025-11-24 15:35:43,885 | INFO     | sum of square deviations: 2517891837463.7227
[2025-11-24 10:36:43] 2025-11-24 15:35:44,060 | INFO     | sum of deviations: 11190879607172.148
[2025-11-24 10:36:43] 2025-11-24 15:35:44,060 | INFO     | mean x: 1763936819.9487562
[2025-11-24 10:36:43] 2025-11-24 15:35:44,060 | INFO     | mean y: 3054651.0791044775
[2025-11-24 10:36:43] 2025-11-24 15:35:44,061 | INFO     | intersect: -7836839141.415482
[2025-11-24 10:36:43] 2025-11-24 15:35:44,064 | INFO     | chi2: 2.8402170705569088
[2025-11-24 10:36:43] 2025-11-24 15:35:44,065 | INFO     | current memory leak: 4.44 B/s (using 2010 data points, chi2=2.84)
[2025-11-24 10:36:43] 2025-11-24 15:35:44,067 | INFO     | could have reported an average CPU frequency of 2600 MHz (71 samples)
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | ..............................
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . Timing measurements:
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . get job = 0 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . initial setup = 5 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . payload setup = 22 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . stage-in = 0 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . payload execution = 124214 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,072 | INFO     | . stage-out = 6 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,073 | INFO     | . log creation = 1 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,073 | INFO     | ..............................
[2025-11-24 10:36:43] 2025-11-24 15:35:44,275 | INFO     | 
[2025-11-24 10:36:43] 2025-11-24 15:35:44,275 | INFO     | job summary report
[2025-11-24 10:36:43] 2025-11-24 15:35:44,275 | INFO     | --------------------------------------------------
[2025-11-24 10:36:43] 2025-11-24 15:35:44,275 | INFO     | PanDA job id: 6893852862
[2025-11-24 10:36:43] 2025-11-24 15:35:44,275 | INFO     | task id: 47523449
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | errors: (none)
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | pilot state: finished 
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | transexitcode: 0
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | exeerrorcode: 0
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | exeerrordiag: 
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | exitcode: 0
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | exitmsg: OK
[2025-11-24 10:36:43] 2025-11-24 15:35:44,276 | INFO     | cpuconsumptiontime: 311244 s
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | nevents: 1000
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | neventsw: 0
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | pid: 3198586
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | pgrp: 3198586
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | corecount: 9
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | event service: False
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298863, 3: 2298863, 14: 2298891, 25: 2298919, 30: 2299337, 36: 2299365, 124237: 2381566, 124238: 2381565, 124246: 2391406, 1242
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | --------------------------------------------------
[2025-11-24 10:36:43] 2025-11-24 15:35:44,277 | INFO     | 
[2025-11-24 10:36:43] 2025-11-24 15:35:44,278 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 10:36:43] 2025-11-24 15:35:44,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,350 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:36:43] 2025-11-24 15:35:44,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:36:43] 2025-11-24 15:35:44,353 | INFO     | job 6893852862 has completed (purged errors)
[2025-11-24 10:36:43] 2025-11-24 15:35:44,353 | INFO     | overall cleanup function is called
[2025-11-24 10:36:43] 2025-11-24 15:35:45,371 | INFO     | --- collectZombieJob: --- 10, [3198586]
[2025-11-24 10:36:43] 2025-11-24 15:35:45,380 | INFO     | zombie collector waiting for pid 3198586
[2025-11-24 10:36:43] 2025-11-24 15:35:45,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:36:43] 2025-11-24 15:35:45,380 | INFO     | collected zombie processes
[2025-11-24 10:36:43] 2025-11-24 15:35:45,380 | INFO     | will attempt to kill all subprocesses of pid=3198586
[2025-11-24 10:36:43] 2025-11-24 15:35:45,973 | INFO     | process IDs to be killed: [3198586] (in reverse order)
[2025-11-24 10:36:43] 2025-11-24 15:35:46,195 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:36:43] 2025-11-24 15:35:46,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:36:43] 2025-11-24 15:35:46,367 | INFO     | did not find any defunct processes belonging to 3198586
[2025-11-24 10:36:43] 2025-11-24 15:35:46,412 | INFO     | did not find any defunct processes belonging to 3198586
[2025-11-24 10:36:43] 2025-11-24 15:35:46,425 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:36:43] 2025-11-24 15:35:46,425 | INFO     | ready for new job
[2025-11-24 10:36:43] 2025-11-24 15:35:46,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:36:43] 2025-11-24 15:35:46,469 | INFO     | ***************************************
[2025-11-24 10:36:43] 2025-11-24 15:35:46,470 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:36:43] 2025-11-24 15:35:46,470 | INFO     | ***************************************
[2025-11-24 10:36:43] 2025-11-24 15:35:46,470 | INFO     | 
[2025-11-24 10:36:43] 2025-11-24 15:35:46,472 | INFO     | architecture information:
[2025-11-24 10:36:43] 2025-11-24 15:35:46,539 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:36:43] 2025-11-24 15:35:46,635 | INFO     | cat /etc/os-release:
[2025-11-24 10:36:43] NAME="CentOS Linux"
[2025-11-24 10:36:43] VERSION="7 (Core)"
[2025-11-24 10:36:43] ID="centos"
[2025-11-24 10:36:43] ID_LIKE="rhel fedora"
[2025-11-24 10:36:43] VERSION_ID="7"
[2025-11-24 10:36:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:36:43] ANSI_COLOR="0;31"
[2025-11-24 10:36:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:36:43] HOME_URL="https://www.centos.org/"
[2025-11-24 10:36:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:36:43] 
[2025-11-24 10:36:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:36:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:36:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:36:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:36:43] 
[2025-11-24 10:36:43] 2025-11-24 15:35:46,635 | INFO     | ***************************************
[2025-11-24 10:36:43] 2025-11-24 15:35:47,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 10:36:43] 2025-11-24 15:35:47,188 | INFO     | sufficient remaining disk space (91268055040 B)
[2025-11-24 10:36:43] 2025-11-24 15:35:47,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:36:43] 2025-11-24 15:35:47,189 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:36:43] 2025-11-24 15:35:47,189 | INFO     | update_server=False
[2025-11-24 10:36:43] 2025-11-24 15:35:47,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:36:43] 2025-11-24 15:35:47,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:36:43] 2025-11-24 15:35:47,229 | INFO     | aborting loop
[2025-11-24 10:36:43] 2025-11-24 15:35:47,889 | INFO     | all data control threads have been joined
[2025-11-24 10:36:43] 2025-11-24 15:35:47,920 | INFO     | all payload control threads have been joined
[2025-11-24 10:36:43] 2025-11-24 15:35:48,206 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:48,235 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:48,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:36:43] 2025-11-24 15:35:48,484 | INFO     | all job control threads have been joined
[2025-11-24 10:36:43] 2025-11-24 15:35:48,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:36:43] 2025-11-24 15:35:48,833 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:48,895 | INFO     | [data] control thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:48,926 | INFO     | [payload] control thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:48,964 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,129 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:36:43] 2025-11-24 15:35:49,490 | INFO     | [job] control thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,535 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,640 | INFO     | [job] validate thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,692 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:49,721 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:50,300 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:50,506 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:35:52,297 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:36:43] 2025-11-24 15:36:18,902 | INFO     | PID=3183823 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 10:36:43] 2025-11-24 15:36:18,903 | INFO     | .. there are 41 such processes running
[2025-11-24 10:36:43] 2025-11-24 15:36:18,903 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:36:43] 2025-11-24 15:36:18,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:36:43] 2025-11-24 15:36:18,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:36:43] 2025-11-24 15:36:35,582 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:36:43] 2025-11-24 15:36:37,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788405741376)>', '<ExcThread(monitor, started 139787663030016)>']
[2025-11-24 10:36:43] 2025-11-24 15:36:38,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:36:43] 2025-11-24 15:36:38,085 | INFO     | [monitor] control thread has ended
[2025-11-24 10:36:43] 2025-11-24 15:36:42,470 | INFO     | all workflow threads have been joined
[2025-11-24 10:36:43] 2025-11-24 15:36:42,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:36:43] 2025-11-24 15:36:42,470 | INFO     | traces error code: 0
[2025-11-24 10:36:43] 2025-11-24 15:36:42,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:36:43] 2025-11-24 15:36:43,111 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:36:43] 2025-11-24 15:36:43,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:36:43] 2025-11-24 15:36:43,136 [wrapper] pilotpid: 3183823
[2025-11-24 10:36:43] 2025-11-24 15:36:43,167 [wrapper] Pilot exit status: 0
[2025-11-24 10:36:43] 2025-11-24 15:36:43,190 [wrapper] pandaids: 6893852862
[2025-11-24 10:36:43] 2025-11-24 15:36:43,324 [wrapper] cleanup supervisor_pilot  622117 3183825
[2025-11-24 10:36:43] 2025-11-24 15:36:43,363 [wrapper] Test setup, not cleaning
[2025-11-24 10:36:43] 2025-11-24 15:36:43,379 [wrapper] apfmon messages muted
[2025-11-24 10:36:43] 2025-11-24 15:36:43,394 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:36:43] 2025-11-24 15:36:43,415 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:36:43]  *** Error codes and diagnostics ***
[2025-11-24 10:36:43]     "exeErrorCode": 0,
[2025-11-24 10:36:43]     "exeErrorDiag": "",
[2025-11-24 10:36:43]     "pilotErrorCode": 0,
[2025-11-24 10:36:43]     "pilotErrorDiag": "",
[2025-11-24 10:36:43]  *** Listing of results directory ***
[2025-11-24 10:36:43] total 1337648
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 07:11 queuedata.json
[2025-11-24 10:36:43] -rwx------. 1 boincer umatlas     36292 Nov 20 07:11 runpilot2-wrapper.sh
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:36:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:02 run_atlas
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:02 job.xml
[2025-11-24 10:36:43] -rw-r--r--. 2 boincer umatlas 409151560 Nov 23 00:02 EVNT.47493127._000403.pool.root.1
[2025-11-24 10:36:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:02 shared
[2025-11-24 10:36:43] -rw-r--r--. 2 boincer umatlas    590106 Nov 23 00:02 input.tar.gz
[2025-11-24 10:36:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:02 start_atlas.sh
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:02 boinc_lockfile
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 00:02 pandaJob.out
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas        57 Nov 23 00:02 setup.sh.local
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas    989784 Nov 23 00:03 agis_schedconf.cvmfs.json
[2025-11-24 10:36:43] drwx------. 5 boincer umatlas      4096 Nov 23 00:03 pilot3
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas       533 Nov 24 10:17 boinc_task_state.xml
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas      6661 Nov 24 10:30 init_data.xml
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas 920097433 Nov 24 10:34 HITS.47523449._004026.pool.root.1
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas      1059 Nov 24 10:35 memory_monitor_summary.json
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas   1516227 Nov 24 10:35 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas   2981983 Nov 24 10:35 log.47523449._004026.job.log.tgz.1
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas        95 Nov 24 10:35 pilot_heartbeat.json
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas      8630 Nov 24 10:35 heartbeat.json
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 10:36 boinc_mmap_file
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas        29 Nov 24 10:36 wrapper_checkpoint.txt
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas      4824 Nov 24 10:36 pilotlog.txt
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas  15309345 Nov 24 10:36 log.47523449._004026.job.log.1
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas       353 Nov 24 10:36 output.list
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas       620 Nov 24 10:36 runtime_log
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas  18309120 Nov 24 10:36 result.tar.gz
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas      9334 Nov 24 10:36 runtime_log.err
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas       661 Nov 24 10:36 bCpMDmfgIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5jHKDmOGTQnn.diag
[2025-11-24 10:36:43] -rw-r--r--. 1 boincer umatlas     21602 Nov 24 10:36 stderr.txt
[2025-11-24 10:36:43] HITS file was successfully produced:
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas 920097433 Nov 24 10:34 shared/HITS.pool.root.1
[2025-11-24 10:36:43]  *** Contents of shared directory: ***
[2025-11-24 10:36:43] total 1316584
[2025-11-24 10:36:43] -rw-r--r--. 2 boincer umatlas 409151560 Nov 23 00:02 ATLAS.root_0
[2025-11-24 10:36:43] -rw-r--r--. 2 boincer umatlas    590106 Nov 23 00:02 input.tar.gz
[2025-11-24 10:36:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:02 start_atlas.sh
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas 920097433 Nov 24 10:34 HITS.pool.root.1
[2025-11-24 10:36:43] -rw-------. 1 boincer umatlas  18309120 Nov 24 10:36 result.tar.gz
10:36:45 (3176928): run_atlas exited; CPU time 314997.907328
10:36:45 (3176928): called boinc_finish(0)

</stderr_txt>
]]>

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