Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
21:51:51 (1895059): wrapper (7.7.26015): starting
21:51:51 (1895059): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:51:51] Arguments: --nthreads 8
[2025-11-21 21:51:51] Threads: 8
[2025-11-21 21:51:51] Checking for CVMFS
[2025-11-21 21:51:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:51:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:51:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:51:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:51:53] 2.13.3.0 4524 1549 58224 153161 0 90 1391089 4096000 10366 130560 0 172549886 99.996 563646 849 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-21 21:51:53] CVMFS is ok
[2025-11-21 21:51:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 21:51:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 21:51:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 21:51:54] Further information can be found at the LHC@home message board.
[2025-11-21 21:51:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:51:54] Checking for apptainer binary...
[2025-11-21 21:51:54] apptainer is not installed, using version from CVMFS
[2025-11-21 21:51:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:51:54] 7950x-linux
[2025-11-21 21:51:54] apptainer works
[2025-11-21 21:51:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:51:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:51:54] Starting ATLAS job with PandaID=6893877283
[2025-11-21 21:51:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc503/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:51:40]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:51:40] 2025-11-23 03:50:42,102 | INFO     | using path: /var/lib/multiboinc/boinc503/slots/7/PanDA_Pilot-6893877283/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:51:40] 2025-11-23 03:50:42,506 | INFO     | number of running child processes to parent process 1995866: 1
[2025-11-22 19:51:40] 2025-11-23 03:50:42,506 | INFO     | maximum number of monitored processes: 16
[2025-11-22 19:51:40] 2025-11-23 03:50:43,690 | INFO     | time since job start (79101s) is within the limit (172800.0s)
[2025-11-22 19:51:40] 2025-11-23 03:50:45,008 | INFO     | monitor loop #5542: job 0:6893877283 is in state 'finished'
[2025-11-22 19:51:40] 2025-11-23 03:50:45,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:51:40] 2025-11-23 03:50:45,695 | INFO     | time since job start (79103s) is within the limit (172800.0s)
[2025-11-22 19:51:40] 2025-11-23 03:50:47,511 | INFO     | monitor loop #5543: job 0:6893877283 is in state 'finished'
[2025-11-22 19:51:40] 2025-11-23 03:50:47,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:51:40] 2025-11-23 03:50:47,700 | INFO     | time since job start (79105s) is within the limit (172800.0s)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,307 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 19:51:40] 2025-11-23 03:50:48,310 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8680624999993
[2025-11-22 19:51:40] 2025-11-23 03:50:48,319 | INFO     | using path: /var/lib/multiboinc/boinc503/slots/7/PanDA_Pilot-6893877283/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,319 | INFO     | extracted standard info from prmon json
[2025-11-22 19:51:40] 2025-11-23 03:50:48,320 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:51:40] 2025-11-23 03:50:48,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:51:40] 2025-11-23 03:50:48,339 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:51:40] 2025-11-23 03:50:48,340 | INFO     | sum of square deviations: 676547189208.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,376 | INFO     | sum of deviations: 8482382501789.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,377 | INFO     | mean x: 1763830303.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,377 | INFO     | mean y: 3433968.33230532
[2025-11-22 19:51:40] 2025-11-23 03:50:48,377 | INFO     | intersect: -22111037183.05486
[2025-11-22 19:51:40] 2025-11-23 03:50:48,377 | INFO     | chi2: 12.390337625536889
[2025-11-22 19:51:40] 2025-11-23 03:50:48,378 | INFO     | sum of square deviations: 668752940743.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,416 | INFO     | sum of deviations: 8997564709654.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,416 | INFO     | mean x: 1763830150.5
[2025-11-22 19:51:40] 2025-11-23 03:50:48,416 | INFO     | mean y: 3444044.7445820435
[2025-11-22 19:51:40] 2025-11-23 03:50:48,416 | INFO     | intersect: -23727555774.606297
[2025-11-22 19:51:40] 2025-11-23 03:50:48,417 | INFO     | chi2: 9.050714434714758
[2025-11-22 19:51:40] 2025-11-23 03:50:48,417 | INFO     | current chi2=9.050714434714758 (change=26.95344785390722 %)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,418 | INFO     | sum of square deviations: 661018786428.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,456 | INFO     | sum of deviations: 9005669644356.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,456 | INFO     | mean x: 1763829998.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,456 | INFO     | mean y: 3444201.309246309
[2025-11-22 19:51:40] 2025-11-23 03:50:48,456 | INFO     | intersect: -24026841468.22412
[2025-11-22 19:51:40] 2025-11-23 03:50:48,456 | INFO     | chi2: 8.872552912450216
[2025-11-22 19:51:40] 2025-11-23 03:50:48,457 | INFO     | current chi2=8.872552912450216 (change=1.9684802072772172 %)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,457 | INFO     | right removable region: 1286
[2025-11-22 19:51:40] 2025-11-23 03:50:48,457 | INFO     | sum of square deviations: 668752940743.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,486 | INFO     | sum of deviations: 7989832217037.009
[2025-11-22 19:51:40] 2025-11-23 03:50:48,487 | INFO     | mean x: 1763830455.5
[2025-11-22 19:51:40] 2025-11-23 03:50:48,487 | INFO     | mean y: 3443599.6826625387
[2025-11-22 19:51:40] 2025-11-23 03:50:48,487 | INFO     | intersect: -21069674049.845184
[2025-11-22 19:51:40] 2025-11-23 03:50:48,487 | INFO     | chi2: 9.802339509043994
[2025-11-22 19:51:40] 2025-11-23 03:50:48,487 | INFO     | current chi2=9.802339509043994 (change=20.88722837672273 %)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,487 | INFO     | left removable region: 10
[2025-11-22 19:51:40] 2025-11-23 03:50:48,488 | INFO     | sum of square deviations: 644214032275.0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,510 | INFO     | sum of deviations: 8270240894349.499
[2025-11-22 19:51:40] 2025-11-23 03:50:48,510 | INFO     | mean x: 1763830272.5
[2025-11-22 19:51:40] 2025-11-23 03:50:48,510 | INFO     | mean y: 3458424.3518808777
[2025-11-22 19:51:40] 2025-11-23 03:50:48,510 | INFO     | intersect: -22640104924.93906
[2025-11-22 19:51:40] 2025-11-23 03:50:48,510 | INFO     | chi2: 5.998658316151573
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | current memory leak: 12.84 B/s (using 1276 data points, chi2=6.00)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | could have reported an average CPU frequency of 3999 MHz (47 samples)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | ..............................
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | . Timing measurements:
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | . get job = 0 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | . initial setup = 3 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | . payload setup = 7 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | . stage-in = 0 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,511 | INFO     | . payload execution = 79063 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,512 | INFO     | . stage-out = 3 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,512 | INFO     | . log creation = 0 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,512 | INFO     | ..............................
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | 
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | job summary report
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | --------------------------------------------------
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | PanDA job id: 6893877283
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | task id: 47523449
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | errors: (none)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:51:40] 2025-11-23 03:50:48,620 | INFO     | pilot state: finished 
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | transexitcode: 0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | exeerrorcode: 0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | exeerrordiag: 
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | exitcode: 0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | exitmsg: OK
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | cpuconsumptiontime: 134618 s
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | nevents: 1000
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | neventsw: 0
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | pid: 1995866
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | pgrp: 1995866
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | corecount: 8
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | event service: False
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | sizes: {0: 2298598, 1: 2298797, 7: 2299059, 12: 2299087, 79074: 2361598, 79075: 2361597, 79078: 2370803, 79081: 2370859, 79088: 2371105}
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | --------------------------------------------------
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | 
[2025-11-22 19:51:40] 2025-11-23 03:50:48,621 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc503/slots/7
[2025-11-22 19:51:40] 2025-11-23 03:50:48,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | job 6893877283 has completed (purged errors)
[2025-11-22 19:51:40] 2025-11-23 03:50:48,648 | INFO     | overall cleanup function is called
[2025-11-22 19:51:40] 2025-11-23 03:50:49,661 | INFO     | --- collectZombieJob: --- 10, [1995866]
[2025-11-22 19:51:40] 2025-11-23 03:50:49,662 | INFO     | zombie collector waiting for pid 1995866
[2025-11-22 19:51:40] 2025-11-23 03:50:49,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:51:40] 2025-11-23 03:50:49,662 | INFO     | collected zombie processes
[2025-11-22 19:51:40] 2025-11-23 03:50:49,662 | INFO     | will attempt to kill all subprocesses of pid=1995866
[2025-11-22 19:51:40] 2025-11-23 03:50:49,922 | INFO     | process IDs to be killed: [1995866] (in reverse order)
[2025-11-22 19:51:40] 2025-11-23 03:50:50,044 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:51:40] 2025-11-23 03:50:50,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:51:40] 2025-11-23 03:50:50,049 | INFO     | did not find any defunct processes belonging to 1995866
[2025-11-22 19:51:40] 2025-11-23 03:50:50,055 | INFO     | did not find any defunct processes belonging to 1995866
[2025-11-22 19:51:40] 2025-11-23 03:50:50,055 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:51:40] 2025-11-23 03:50:50,055 | INFO     | ready for new job
[2025-11-22 19:51:40] 2025-11-23 03:50:50,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:51:40] 2025-11-23 03:50:50,059 | INFO     | ***************************************
[2025-11-22 19:51:40] 2025-11-23 03:50:50,059 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:51:40] 2025-11-23 03:50:50,059 | INFO     | ***************************************
[2025-11-22 19:51:40] 2025-11-23 03:50:50,059 | INFO     | 
[2025-11-22 19:51:40] 2025-11-23 03:50:50,060 | INFO     | architecture information:
[2025-11-22 19:51:40] 2025-11-23 03:50:50,062 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:51:40] 2025-11-23 03:50:50,079 | INFO     | cat /etc/os-release:
[2025-11-22 19:51:40] NAME="CentOS Linux"
[2025-11-22 19:51:40] VERSION="7 (Core)"
[2025-11-22 19:51:40] ID="centos"
[2025-11-22 19:51:40] ID_LIKE="rhel fedora"
[2025-11-22 19:51:40] VERSION_ID="7"
[2025-11-22 19:51:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:51:40] ANSI_COLOR="0;31"
[2025-11-22 19:51:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:51:40] HOME_URL="https://www.centos.org/"
[2025-11-22 19:51:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:51:40] 
[2025-11-22 19:51:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:51:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:51:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:51:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:51:40] 
[2025-11-22 19:51:40] 2025-11-23 03:50:50,079 | INFO     | ***************************************
[2025-11-22 19:51:40] 2025-11-23 03:50:50,582 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc503/slots/7
[2025-11-22 19:51:40] 2025-11-23 03:50:50,596 | INFO     | sufficient remaining disk space (178414157824 B)
[2025-11-22 19:51:40] 2025-11-23 03:50:50,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:51:40] 2025-11-23 03:50:50,596 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:51:40] 2025-11-23 03:50:50,596 | INFO     | update_server=False
[2025-11-22 19:51:40] 2025-11-23 03:50:50,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:51:40] 2025-11-23 03:50:50,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:51:40] 2025-11-23 03:50:50,991 | INFO     | all data control threads have been joined
[2025-11-22 19:51:40] 2025-11-23 03:50:51,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:51:40] 2025-11-23 03:50:51,020 | INFO     | aborting loop
[2025-11-22 19:51:40] 2025-11-23 03:50:51,087 | INFO     | all payload control threads have been joined
[2025-11-22 19:51:40] 2025-11-23 03:50:51,362 | INFO     | all job control threads have been joined
[2025-11-22 19:51:40] 2025-11-23 03:50:51,602 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:51,602 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:51,639 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:51,789 | INFO     | [job] validate thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:51,996 | INFO     | [data] control thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,024 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:51:40] 2025-11-23 03:50:52,092 | INFO     | [payload] control thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,114 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:51:40] 2025-11-23 03:50:52,367 | INFO     | [job] control thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,421 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,431 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:52,823 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:53,010 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:54,082 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:50:56,160 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:51:40] 2025-11-23 03:51:21,019 | INFO     | PID=1930907 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 19:51:40] 2025-11-23 03:51:21,019 | INFO     | .. there are 13 such processes running
[2025-11-22 19:51:40] 2025-11-23 03:51:21,019 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:51:40] 2025-11-23 03:51:21,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:51:40] 2025-11-23 03:51:21,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:51:40] 2025-11-23 03:51:34,126 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:51:40] 2025-11-23 03:51:35,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127937665734464)>', '<ExcThread(monitor, started 127937177171712)>']
[2025-11-22 19:51:40] 2025-11-23 03:51:35,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:51:40] 2025-11-23 03:51:35,090 | INFO     | [monitor] control thread has ended
[2025-11-22 19:51:40] 2025-11-23 03:51:40,070 | INFO     | all workflow threads have been joined
[2025-11-22 19:51:40] 2025-11-23 03:51:40,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:51:40] 2025-11-23 03:51:40,071 | INFO     | traces error code: 0
[2025-11-22 19:51:40] 2025-11-23 03:51:40,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:51:40] 2025-11-23 03:51:40,199 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:51:40] 2025-11-23 03:51:40,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:51:40] 2025-11-23 03:51:40,203 [wrapper] pilotpid: 1930907
[2025-11-22 19:51:40] 2025-11-23 03:51:40,207 [wrapper] Pilot exit status: 0
[2025-11-22 19:51:40] 2025-11-23 03:51:40,225 [wrapper] pandaids: 6893877283
[2025-11-22 19:51:40] 2025-11-23 03:51:40,286 [wrapper] cleanup supervisor_pilot 4049614 1930911
[2025-11-22 19:51:40] 2025-11-23 03:51:40,299 [wrapper] Test setup, not cleaning
[2025-11-22 19:51:40] 2025-11-23 03:51:40,301 [wrapper] apfmon messages muted
[2025-11-22 19:51:40] 2025-11-23 03:51:40,302 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:51:40] 2025-11-23 03:51:40,305 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:51:40]  *** Error codes and diagnostics ***
[2025-11-22 19:51:40]     "exeErrorCode": 0,
[2025-11-22 19:51:40]     "exeErrorDiag": "",
[2025-11-22 19:51:40]     "pilotErrorCode": 0,
[2025-11-22 19:51:40]     "pilotErrorDiag": "",
[2025-11-22 19:51:40]  *** Listing of results directory ***
[2025-11-22 19:51:40] total 1313604
[2025-11-22 19:51:40] -rw-r--r-- 1 root root    576529 Nov 20 10:04 pilot3.tar.gz
[2025-11-22 19:51:40] -rwx------ 1 4871 1028     36292 Nov 20 10:35 runpilot2-wrapper.sh
[2025-11-22 19:51:40] -rw-r--r-- 1 root root      5112 Nov 20 10:35 queuedata.json
[2025-11-22 19:51:40] -rw-r--r-- 1 root root       100 Nov 21 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:51:40] -rwxr-xr-x 1 root root      7986 Nov 21 21:51 run_atlas
[2025-11-22 19:51:40] -rw-r--r-- 1 root root       105 Nov 21 21:51 job.xml
[2025-11-22 19:51:40] -rw-r--r-- 2 root root 406630412 Nov 21 21:51 EVNT.47493127._000797.pool.root.1
[2025-11-22 19:51:40] -rw-r--r-- 1 root root      7071 Nov 21 21:51 init_data.xml
[2025-11-22 19:51:40] -rw-r--r-- 2 root root     15847 Nov 21 21:51 start_atlas.sh
[2025-11-22 19:51:40] drwxrwx--x 2 root root      4096 Nov 21 21:51 shared
[2025-11-22 19:51:40] -rw-r--r-- 2 root root    590103 Nov 21 21:51 input.tar.gz
[2025-11-22 19:51:40] -rw-r--r-- 1 root root         0 Nov 21 21:51 boinc_lockfile
[2025-11-22 19:51:40] -rw-r--r-- 1 root root      2784 Nov 21 21:51 pandaJob.out
[2025-11-22 19:51:40] -rw------- 1 root root    989752 Nov 21 21:52 agis_schedconf.cvmfs.json
[2025-11-22 19:51:40] drwxr-xr-x 5  320  320      4096 Nov 21 21:52 pilot3
[2025-11-22 19:51:40] -rw-r--r-- 1 root root       533 Nov 22 19:43 boinc_task_state.xml
[2025-11-22 19:51:40] -rw------- 1 root root 907746818 Nov 22 19:50 HITS.47523449._007966.pool.root.1
[2025-11-22 19:51:40] -rw------- 1 root root      1077 Nov 22 19:50 memory_monitor_summary.json
[2025-11-22 19:51:40] -rw------- 1 root root   1526164 Nov 22 19:50 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:51:40] -rw------- 1 root root   2371612 Nov 22 19:50 log.47523449._007966.job.log.tgz.1
[2025-11-22 19:51:40] -rw------- 1 root root      8619 Nov 22 19:50 heartbeat.json
[2025-11-22 19:51:40] -rw------- 1 root root        95 Nov 22 19:51 pilot_heartbeat.json
[2025-11-22 19:51:40] -rw-r--r-- 1 root root        29 Nov 22 19:51 wrapper_checkpoint.txt
[2025-11-22 19:51:40] -rw-r--r-- 1 root root      8192 Nov 22 19:51 boinc_mmap_file
[2025-11-22 19:51:40] -rw------- 1 root root      4839 Nov 22 19:51 pilotlog.txt
[2025-11-22 19:51:40] -rw------- 1 root root  11041717 Nov 22 19:51 log.47523449._007966.job.log.1
[2025-11-22 19:51:40] -rw------- 1 root root       353 Nov 22 19:51 output.list
[2025-11-22 19:51:40] -rw-r--r-- 1 root root       620 Nov 22 19:51 runtime_log
[2025-11-22 19:51:40] -rw------- 1 root root  13434880 Nov 22 19:51 result.tar.gz
[2025-11-22 19:51:40] -rw-r--r-- 1 root root      9019 Nov 22 19:51 runtime_log.err
[2025-11-22 19:51:40] -rw------- 1 root root       664 Nov 22 19:51 MyZNDmTgOg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIPIKDmHMoNWn.diag
[2025-11-22 19:51:40] -rw-r--r-- 1 root root     21667 Nov 22 19:51 stderr.txt
[2025-11-22 19:51:40] HITS file was successfully produced:
[2025-11-22 19:51:40] -rw------- 1 root root 907746818 Nov 22 19:50 shared/HITS.pool.root.1
[2025-11-22 19:51:40]  *** Contents of shared directory: ***
[2025-11-22 19:51:40] total 1297300
[2025-11-22 19:51:40] -rw-r--r-- 2 root root 406630412 Nov 21 21:51 ATLAS.root_0
[2025-11-22 19:51:40] -rw-r--r-- 2 root root     15847 Nov 21 21:51 start_atlas.sh
[2025-11-22 19:51:40] -rw-r--r-- 2 root root    590103 Nov 21 21:51 input.tar.gz
[2025-11-22 19:51:40] -rw------- 1 root root 907746818 Nov 22 19:50 HITS.pool.root.1
[2025-11-22 19:51:40] -rw------- 1 root root  13434880 Nov 22 19:51 result.tar.gz
19:51:42 (1895059): run_atlas exited; CPU time 135277.905864
19:51:42 (1895059): called boinc_finish(0)

</stderr_txt>
]]>

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