Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
21:51:50 (1894658): wrapper (7.7.26015): starting
21:51:50 (1894658): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:51:50] Arguments: --nthreads 8
[2025-11-21 21:51:50] Threads: 8
[2025-11-21 21:51:50] Checking for CVMFS
[2025-11-21 21:51:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:51:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:51:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:51:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:51:53] 2.13.3.0 4524 1549 58224 153161 0 90 1391089 4096000 10365 130560 0 172549830 99.996 563646 849 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-21 21:51:53] CVMFS is ok
[2025-11-21 21:51:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 21:51:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 21:51:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 21:51:53] Further information can be found at the LHC@home message board.
[2025-11-21 21:51:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:51:53] Checking for apptainer binary...
[2025-11-21 21:51:53] apptainer is not installed, using version from CVMFS
[2025-11-21 21:51:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:51:54] 7950x-linux
[2025-11-21 21:51:54] apptainer works
[2025-11-21 21:51:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:51:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:51:54] Starting ATLAS job with PandaID=6893877172
[2025-11-21 21:51:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc503/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:04:00]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:04:00] 2025-11-23 04:03:23,872 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:04:00] 2025-11-23 04:03:23,872 | INFO     | job 6893877172 has state=finished
[2025-11-22 20:04:00] 2025-11-23 04:03:23,872 | INFO     | preparing for final server update for job 6893877172 in state='finished'
[2025-11-22 20:04:00] 2025-11-23 04:03:23,873 | INFO     | this job has now completed (state=finished)
[2025-11-22 20:04:00] 2025-11-23 04:03:23,873 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-22 20:04:00] 2025-11-23 04:03:23,873 | INFO     | log transfer has been attempted: DONE
[2025-11-22 20:04:00] 2025-11-23 04:03:23,873 | INFO     | job 6893877172 has finished - writing final server update
[2025-11-22 20:04:00] 2025-11-23 04:03:23,873 | INFO     | total number of processed events: 1000 (read)
[2025-11-22 20:04:00] 2025-11-23 04:03:23,873 | INFO     | executing command: lscpu
[2025-11-22 20:04:00] 2025-11-23 04:03:23,899 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-22 20:04:00] 2025-11-23 04:03:24,590 | INFO     | time since job start (79856s) is within the limit (172800.0s)
[2025-11-22 20:04:00] 2025-11-23 04:03:26,309 | INFO     | monitor loop #5599: job 0:6893877172 is in state 'finished'
[2025-11-22 20:04:00] 2025-11-23 04:03:26,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:04:00] 2025-11-23 04:03:26,595 | INFO     | time since job start (79858s) is within the limit (172800.0s)
[2025-11-22 20:04:00] 2025-11-23 04:03:27,863 | INFO     | PID=1932801 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 20:04:00] 2025-11-23 04:03:27,863 | INFO     | .. there are 11 such processes running
[2025-11-22 20:04:00] 2025-11-23 04:03:28,198 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 20:04:00] 2025-11-23 04:03:28,202 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.867031249999
[2025-11-22 20:04:00] 2025-11-23 04:03:28,207 | INFO     | using path: /var/lib/multiboinc/boinc503/slots/5/PanDA_Pilot-6893877172/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,208 | INFO     | extracted standard info from prmon json
[2025-11-22 20:04:00] 2025-11-23 04:03:28,208 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:04:00] 2025-11-23 04:03:28,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:04:00] 2025-11-23 04:03:28,222 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:04:00] 2025-11-23 04:03:28,223 | INFO     | sum of square deviations: 695499961310.0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,246 | INFO     | sum of deviations: 9036818024701.998
[2025-11-22 20:04:00] 2025-11-23 04:03:28,246 | INFO     | mean x: 1763830674.0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,246 | INFO     | mean y: 3443730.050420168
[2025-11-22 20:04:00] 2025-11-23 04:03:28,246 | INFO     | intersect: -22914482530.222824
[2025-11-22 20:04:00] 2025-11-23 04:03:28,249 | INFO     | chi2: 11.730787181057089
[2025-11-22 20:04:00] 2025-11-23 04:03:28,250 | INFO     | sum of square deviations: 687560538030.0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,271 | INFO     | sum of deviations: 9451945422468.5
[2025-11-22 20:04:00] 2025-11-23 04:03:28,271 | INFO     | mean x: 1763830521.5
[2025-11-22 20:04:00] 2025-11-23 04:03:28,271 | INFO     | mean y: 3451697.523773006
[2025-11-22 20:04:00] 2025-11-23 04:03:28,271 | INFO     | intersect: -24244056560.39595
[2025-11-22 20:04:00] 2025-11-23 04:03:28,272 | INFO     | chi2: 9.22204262173263
[2025-11-22 20:04:00] 2025-11-23 04:03:28,272 | INFO     | current chi2=9.22204262173263 (change=21.385986469651304 %)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,272 | INFO     | right removable region: 1303
[2025-11-22 20:04:00] 2025-11-23 04:03:28,273 | INFO     | sum of square deviations: 687560538030.0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,294 | INFO     | sum of deviations: 8537756533673.502
[2025-11-22 20:04:00] 2025-11-23 04:03:28,295 | INFO     | mean x: 1763830826.5
[2025-11-22 20:04:00] 2025-11-23 04:03:28,295 | INFO     | mean y: 3453310.3734662575
[2025-11-22 20:04:00] 2025-11-23 04:03:28,295 | INFO     | intersect: -21898848131.173256
[2025-11-22 20:04:00] 2025-11-23 04:03:28,295 | INFO     | chi2: 9.147110501768942
[2025-11-22 20:04:00] 2025-11-23 04:03:28,295 | INFO     | current chi2=9.147110501768942 (change=22.024751105026226 %)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,296 | INFO     | left removable region: 10
[2025-11-22 20:04:00] 2025-11-23 04:03:28,296 | INFO     | sum of square deviations: 670306975462.0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,320 | INFO     | sum of deviations: 8724305446177.005
[2025-11-22 20:04:00] 2025-11-23 04:03:28,320 | INFO     | mean x: 1763830796.0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,320 | INFO     | mean y: 3466222.86774942
[2025-11-22 20:04:00] 2025-11-23 04:03:28,320 | INFO     | intersect: -22953476167.70101
[2025-11-22 20:04:00] 2025-11-23 04:03:28,321 | INFO     | chi2: 6.316537719178863
[2025-11-22 20:04:00] 2025-11-23 04:03:28,321 | INFO     | current memory leak: 13.02 B/s (using 1293 data points, chi2=6.32)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | could have reported an average CPU frequency of 3999 MHz (48 samples)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | ..............................
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . Timing measurements:
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . get job = 0 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . initial setup = 8 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . payload setup = 8 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . stage-in = 0 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . payload execution = 79821 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . stage-out = 4 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | . log creation = 0 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,326 | INFO     | ..............................
[2025-11-22 20:04:00] 2025-11-23 04:03:28,389 | INFO     | 
[2025-11-22 20:04:00] 2025-11-23 04:03:28,389 | INFO     | job summary report
[2025-11-22 20:04:00] 2025-11-23 04:03:28,389 | INFO     | --------------------------------------------------
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | PanDA job id: 6893877172
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | task id: 47523449
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | errors: (none)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | pilot state: finished 
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | transexitcode: 0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | exeerrorcode: 0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | exeerrordiag: 
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | exitcode: 0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | exitmsg: OK
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | cpuconsumptiontime: 136725 s
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | nevents: 1000
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | neventsw: 0
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | pid: 2033498
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | pgrp: 2033498
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | corecount: 8
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | event service: False
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | sizes: {0: 2298598, 1: 2298797, 6: 2299059, 11: 2299087, 79834: 2361845, 79838: 2370867, 79839: 2371051, 79844: 2371297}
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | --------------------------------------------------
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | 
[2025-11-22 20:04:00] 2025-11-23 04:03:28,390 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc503/slots/5
[2025-11-22 20:04:00] 2025-11-23 04:03:28,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | job 6893877172 has completed (purged errors)
[2025-11-22 20:04:00] 2025-11-23 04:03:28,412 | INFO     | overall cleanup function is called
[2025-11-22 20:04:00] 2025-11-23 04:03:29,428 | INFO     | --- collectZombieJob: --- 10, [2033498]
[2025-11-22 20:04:00] 2025-11-23 04:03:29,429 | INFO     | zombie collector waiting for pid 2033498
[2025-11-22 20:04:00] 2025-11-23 04:03:29,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:04:00] 2025-11-23 04:03:29,429 | INFO     | collected zombie processes
[2025-11-22 20:04:00] 2025-11-23 04:03:29,429 | INFO     | will attempt to kill all subprocesses of pid=2033498
[2025-11-22 20:04:00] 2025-11-23 04:03:29,730 | INFO     | process IDs to be killed: [2033498] (in reverse order)
[2025-11-22 20:04:00] 2025-11-23 04:03:29,875 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:04:00] 2025-11-23 04:03:29,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:04:00] 2025-11-23 04:03:29,881 | INFO     | did not find any defunct processes belonging to 2033498
[2025-11-22 20:04:00] 2025-11-23 04:03:29,887 | INFO     | did not find any defunct processes belonging to 2033498
[2025-11-22 20:04:00] 2025-11-23 04:03:29,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:04:00] 2025-11-23 04:03:29,888 | INFO     | ready for new job
[2025-11-22 20:04:00] 2025-11-23 04:03:29,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:04:00] 2025-11-23 04:03:29,895 | INFO     | ***************************************
[2025-11-22 20:04:00] 2025-11-23 04:03:29,895 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:04:00] 2025-11-23 04:03:29,895 | INFO     | ***************************************
[2025-11-22 20:04:00] 2025-11-23 04:03:29,895 | INFO     | 
[2025-11-22 20:04:00] 2025-11-23 04:03:29,896 | INFO     | architecture information:
[2025-11-22 20:04:00] 2025-11-23 04:03:29,897 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:04:00] 2025-11-23 04:03:29,914 | INFO     | cat /etc/os-release:
[2025-11-22 20:04:00] NAME="CentOS Linux"
[2025-11-22 20:04:00] VERSION="7 (Core)"
[2025-11-22 20:04:00] ID="centos"
[2025-11-22 20:04:00] ID_LIKE="rhel fedora"
[2025-11-22 20:04:00] VERSION_ID="7"
[2025-11-22 20:04:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:04:00] ANSI_COLOR="0;31"
[2025-11-22 20:04:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:04:00] HOME_URL="https://www.centos.org/"
[2025-11-22 20:04:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:04:00] 
[2025-11-22 20:04:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:04:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:04:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:04:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:04:00] 
[2025-11-22 20:04:00] 2025-11-23 04:03:29,914 | INFO     | ***************************************
[2025-11-22 20:04:00] 2025-11-23 04:03:30,417 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc503/slots/5
[2025-11-22 20:04:00] 2025-11-23 04:03:30,430 | INFO     | sufficient remaining disk space (181800009728 B)
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | INFO     | update_server=False
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:04:00] 2025-11-23 04:03:30,431 | INFO     | aborting loop
[2025-11-22 20:04:00] 2025-11-23 04:03:30,865 | INFO     | all payload control threads have been joined
[2025-11-22 20:04:00] 2025-11-23 04:03:30,957 | INFO     | all data control threads have been joined
[2025-11-22 20:04:00] 2025-11-23 04:03:31,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:04:00] 2025-11-23 04:03:31,436 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,436 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,612 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,691 | INFO     | all job control threads have been joined
[2025-11-22 20:04:00] 2025-11-23 04:03:31,742 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,799 | INFO     | [job] validate thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,827 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,870 | INFO     | [payload] control thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:31,962 | INFO     | [data] control thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:32,247 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:32,422 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:32,696 | INFO     | [job] control thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:32,929 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:33,346 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:33,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:04:00] 2025-11-23 04:03:34,403 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:34,436 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:40,663 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:04:00] 2025-11-23 04:03:40,987 | INFO     | job.realtimelogging is not enabled
[2025-11-22 20:04:00] 2025-11-23 04:03:41,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:04:00] 2025-11-23 04:03:43,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638749157184)>', '<ExcThread(monitor, started 140637965907712)>']
[2025-11-22 20:04:00] 2025-11-23 04:03:48,517 | INFO     | all workflow threads have been joined
[2025-11-22 20:04:00] 2025-11-23 04:03:48,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:04:00] 2025-11-23 04:03:48,518 | INFO     | traces error code: 0
[2025-11-22 20:04:00] 2025-11-23 04:03:48,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | INFO     | PID=1932801 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | INFO     | .. there are 11 such processes running
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:04:00] 2025-11-23 04:04:00,229 | INFO     | [monitor] control thread has ended
[2025-11-22 20:04:00] 2025-11-23 04:04:00,317 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:04:00] 2025-11-23 04:04:00,320 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:04:00] 2025-11-23 04:04:00,322 [wrapper] pilotpid: 1932801
[2025-11-22 20:04:00] 2025-11-23 04:04:00,323 [wrapper] Pilot exit status: 0
[2025-11-22 20:04:00] 2025-11-23 04:04:00,336 [wrapper] pandaids: 6893877172
[2025-11-22 20:04:00] 2025-11-23 04:04:00,388 [wrapper] cleanup supervisor_pilot 4065133 1932802
[2025-11-22 20:04:00] 2025-11-23 04:04:00,390 [wrapper] Test setup, not cleaning
[2025-11-22 20:04:00] 2025-11-23 04:04:00,391 [wrapper] apfmon messages muted
[2025-11-22 20:04:00] 2025-11-23 04:04:00,393 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:04:00] 2025-11-23 04:04:00,395 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:04:00]  *** Error codes and diagnostics ***
[2025-11-22 20:04:00]     "exeErrorCode": 0,
[2025-11-22 20:04:00]     "exeErrorDiag": "",
[2025-11-22 20:04:00]     "pilotErrorCode": 0,
[2025-11-22 20:04:00]     "pilotErrorDiag": "",
[2025-11-22 20:04:00]  *** Listing of results directory ***
[2025-11-22 20:04:00] total 1330428
[2025-11-22 20:04:00] -rw-r--r-- 1 root root    576529 Nov 20 10:04 pilot3.tar.gz
[2025-11-22 20:04:00] -rwx------ 1 4871 1028     36292 Nov 20 10:23 runpilot2-wrapper.sh
[2025-11-22 20:04:00] -rw-r--r-- 1 root root      5112 Nov 20 10:23 queuedata.json
[2025-11-22 20:04:00] -rw-r--r-- 1 root root       100 Nov 21 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:04:00] -rwxr-xr-x 1 root root      7986 Nov 21 21:51 run_atlas
[2025-11-22 20:04:00] -rw-r--r-- 1 root root       105 Nov 21 21:51 job.xml
[2025-11-22 20:04:00] -rw-r--r-- 1 root root      7071 Nov 21 21:51 init_data.xml
[2025-11-22 20:04:00] -rw-r--r-- 2 root root 408785875 Nov 21 21:51 EVNT.47493127._000793.pool.root.1
[2025-11-22 20:04:00] -rw-r--r-- 2 root root     15847 Nov 21 21:51 start_atlas.sh
[2025-11-22 20:04:00] drwxrwx--x 2 root root      4096 Nov 21 21:51 shared
[2025-11-22 20:04:00] -rw-r--r-- 2 root root    590096 Nov 21 21:51 input.tar.gz
[2025-11-22 20:04:00] -rw-r--r-- 1 root root         0 Nov 21 21:51 boinc_lockfile
[2025-11-22 20:04:00] -rw-r--r-- 1 root root      2784 Nov 21 21:51 pandaJob.out
[2025-11-22 20:04:00] -rw------- 1 root root    989752 Nov 21 21:52 agis_schedconf.cvmfs.json
[2025-11-22 20:04:00] drwxr-xr-x 5  320  320      4096 Nov 21 21:52 pilot3
[2025-11-22 20:04:00] -rw-r--r-- 1 root root       533 Nov 22 19:57 boinc_task_state.xml
[2025-11-22 20:04:00] -rw------- 1 root root 922623556 Nov 22 20:02 HITS.47523449._007923.pool.root.1
[2025-11-22 20:04:00] -rw------- 1 root root        95 Nov 22 20:03 pilot_heartbeat.json
[2025-11-22 20:04:00] -rw------- 1 root root      1065 Nov 22 20:03 memory_monitor_summary.json
[2025-11-22 20:04:00] -rw------- 1 root root   1526164 Nov 22 20:03 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:04:00] -rw------- 1 root root   2374398 Nov 22 20:03 log.47523449._007923.job.log.tgz.1
[2025-11-22 20:04:00] -rw------- 1 root root      8618 Nov 22 20:03 heartbeat.json
[2025-11-22 20:04:00] -rw-r--r-- 1 root root      8192 Nov 22 20:03 boinc_mmap_file
[2025-11-22 20:04:00] -rw-r--r-- 1 root root        29 Nov 22 20:03 wrapper_checkpoint.txt
[2025-11-22 20:04:00] -rw------- 1 root root       823 Nov 22 20:04 pilotlog.txt
[2025-11-22 20:04:00] -rw------- 1 root root  11139979 Nov 22 20:04 log.47523449._007923.job.log.1
[2025-11-22 20:04:00] -rw------- 1 root root       353 Nov 22 20:04 output.list
[2025-11-22 20:04:00] -rw-r--r-- 1 root root       620 Nov 22 20:04 runtime_log
[2025-11-22 20:04:00] -rw------- 1 root root  13537280 Nov 22 20:04 result.tar.gz
[2025-11-22 20:04:00] -rw-r--r-- 1 root root      9019 Nov 22 20:04 runtime_log.err
[2025-11-22 20:04:00] -rw------- 1 root root       664 Nov 22 20:04 JgMNDmXUOg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQxGKDmEnPWQm.diag
[2025-11-22 20:04:00] -rw-r--r-- 1 root root     21949 Nov 22 20:04 stderr.txt
[2025-11-22 20:04:00] HITS file was successfully produced:
[2025-11-22 20:04:00] -rw------- 1 root root 922623556 Nov 22 20:02 shared/HITS.pool.root.1
[2025-11-22 20:04:00]  *** Contents of shared directory: ***
[2025-11-22 20:04:00] total 1314032
[2025-11-22 20:04:00] -rw-r--r-- 2 root root 408785875 Nov 21 21:51 ATLAS.root_0
[2025-11-22 20:04:00] -rw-r--r-- 2 root root     15847 Nov 21 21:51 start_atlas.sh
[2025-11-22 20:04:00] -rw-r--r-- 2 root root    590096 Nov 21 21:51 input.tar.gz
[2025-11-22 20:04:00] -rw------- 1 root root 922623556 Nov 22 20:02 HITS.pool.root.1
[2025-11-22 20:04:00] -rw------- 1 root root  13537280 Nov 22 20:04 result.tar.gz
20:04:01 (1894658): run_atlas exited; CPU time 137368.727571
20:04:01 (1894658): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN