Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
21:51:53 (1895615): wrapper (7.7.26015): starting
21:51:53 (1895615): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:51:53] Arguments: --nthreads 8
[2025-11-21 21:51:53] Threads: 8
[2025-11-21 21:51:53] Checking for CVMFS
[2025-11-21 21:51:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:51:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:51:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:51:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:51:54] 2.13.3.0 4524 1549 58224 153161 0 90 1391089 4096000 10469 130560 0 172551870 99.996 563646 849 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-21 21:51:54] CVMFS is ok
[2025-11-21 21:51:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 21:51:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 21:51:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 21:51:54] Further information can be found at the LHC@home message board.
[2025-11-21 21:51:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:51:54] Checking for apptainer binary...
[2025-11-21 21:51:54] apptainer is not installed, using version from CVMFS
[2025-11-21 21:51:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:51:55] 7950x-linux
[2025-11-21 21:51:55] apptainer works
[2025-11-21 21:51:55] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:51:55] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:51:55] Starting ATLAS job with PandaID=6894237906
[2025-11-21 21:51:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc503/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:15:43]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:15:43] 2025-11-23 04:14:40,158 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-22 20:15:43] 2025-11-23 04:14:40,969 | INFO     | time since job start (80537s) is within the limit (172800.0s)
[2025-11-22 20:15:43] 2025-11-23 04:14:41,731 | INFO     | monitor loop #5652: job 0:6894237906 is in state 'finished'
[2025-11-22 20:15:43] 2025-11-23 04:14:41,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:15:43] 2025-11-23 04:14:42,974 | INFO     | time since job start (80539s) is within the limit (172800.0s)
[2025-11-22 20:15:43] 2025-11-23 04:14:44,234 | INFO     | monitor loop #5653: job 0:6894237906 is in state 'finished'
[2025-11-22 20:15:43] 2025-11-23 04:14:44,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:15:43] 2025-11-23 04:14:44,979 | INFO     | time since job start (80541s) is within the limit (172800.0s)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,239 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 20:15:43] 2025-11-23 04:14:45,242 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.86415625
[2025-11-22 20:15:43] 2025-11-23 04:14:45,245 | INFO     | using path: /var/lib/multiboinc/boinc503/slots/9/PanDA_Pilot-6894237906/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,245 | INFO     | extracted standard info from prmon json
[2025-11-22 20:15:43] 2025-11-23 04:14:45,246 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:15:43] 2025-11-23 04:14:45,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:15:43] 2025-11-23 04:14:45,259 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:15:43] 2025-11-23 04:14:45,260 | INFO     | sum of square deviations: 713208447341.4877
[2025-11-22 20:15:43] 2025-11-23 04:14:45,279 | INFO     | sum of deviations: 8843335981664.852
[2025-11-22 20:15:43] 2025-11-23 04:14:45,279 | INFO     | mean x: 1763831006.2530303
[2025-11-22 20:15:43] 2025-11-23 04:14:45,279 | INFO     | mean y: 3458588.9765151516
[2025-11-22 20:15:43] 2025-11-23 04:14:45,279 | INFO     | intersect: -21866936049.948833
[2025-11-22 20:15:43] 2025-11-23 04:14:45,280 | INFO     | chi2: 12.434374261476629
[2025-11-22 20:15:43] 2025-11-23 04:14:45,280 | INFO     | sum of square deviations: 705135073548.6421
[2025-11-22 20:15:43] 2025-11-23 04:14:45,299 | INFO     | sum of deviations: 9343864020899.236
[2025-11-22 20:15:43] 2025-11-23 04:14:45,299 | INFO     | mean x: 1763830853.7558935
[2025-11-22 20:15:43] 2025-11-23 04:14:45,299 | INFO     | mean y: 3468039.8730038023
[2025-11-22 20:15:43] 2025-11-23 04:14:45,299 | INFO     | intersect: -23369352674.348316
[2025-11-22 20:15:43] 2025-11-23 04:14:45,300 | INFO     | chi2: 9.225788592605292
[2025-11-22 20:15:43] 2025-11-23 04:14:45,300 | INFO     | current chi2=9.225788592605292 (change=25.80415870874957 %)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,301 | INFO     | sum of square deviations: 697122783600.7902
[2025-11-22 20:15:43] 2025-11-23 04:14:45,323 | INFO     | sum of deviations: 9310096146934.934
[2025-11-22 20:15:43] 2025-11-23 04:14:45,323 | INFO     | mean x: 1763830701.2580152
[2025-11-22 20:15:43] 2025-11-23 04:14:45,323 | INFO     | mean y: 3467395.911450382
[2025-11-22 20:15:43] 2025-11-23 04:14:45,323 | INFO     | intersect: -23552545693.7878
[2025-11-22 20:15:43] 2025-11-23 04:14:45,324 | INFO     | chi2: 9.160451272042447
[2025-11-22 20:15:43] 2025-11-23 04:14:45,324 | INFO     | current chi2=9.160451272042447 (change=0.7082030972963621 %)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,324 | INFO     | right removable region: 1309
[2025-11-22 20:15:43] 2025-11-23 04:14:45,325 | INFO     | sum of square deviations: 705134467208.6417
[2025-11-22 20:15:43] 2025-11-23 04:14:45,343 | INFO     | sum of deviations: 8337044111797.316
[2025-11-22 20:15:43] 2025-11-23 04:14:45,343 | INFO     | mean x: 1763831158.7558935
[2025-11-22 20:15:43] 2025-11-23 04:14:45,343 | INFO     | mean y: 3468146.377946768
[2025-11-22 20:15:43] 2025-11-23 04:14:45,343 | INFO     | intersect: -20850906246.24321
[2025-11-22 20:15:43] 2025-11-23 04:14:45,344 | INFO     | chi2: 9.83223980644714
[2025-11-22 20:15:43] 2025-11-23 04:14:45,344 | INFO     | current chi2=9.83223980644714 (change=20.926943329116714 %)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,344 | INFO     | left removable region: 10
[2025-11-22 20:15:43] 2025-11-23 04:14:45,345 | INFO     | sum of square deviations: 679708860779.9164
[2025-11-22 20:15:43] 2025-11-23 04:14:45,363 | INFO     | sum of deviations: 8553489688192.709
[2025-11-22 20:15:43] 2025-11-23 04:14:45,363 | INFO     | mean x: 1763830975.764434
[2025-11-22 20:15:43] 2025-11-23 04:14:45,363 | INFO     | mean y: 3481533.2016936103
[2025-11-22 20:15:43] 2025-11-23 04:14:45,363 | INFO     | intersect: -22192654096.99274
[2025-11-22 20:15:43] 2025-11-23 04:14:45,364 | INFO     | chi2: 6.261257308864582
[2025-11-22 20:15:43] 2025-11-23 04:14:45,364 | INFO     | current memory leak: 12.58 B/s (using 1299 data points, chi2=6.26)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | could have reported an average CPU frequency of 3999 MHz (48 samples)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | ..............................
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . Timing measurements:
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . get job = 0 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . initial setup = 3 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . payload setup = 7 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . stage-in = 0 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . payload execution = 80490 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . stage-out = 12 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | . log creation = 0 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,365 | INFO     | ..............................
[2025-11-22 20:15:43] 2025-11-23 04:14:45,667 | INFO     | 
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | job summary report
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | --------------------------------------------------
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | PanDA job id: 6894237906
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | task id: 47533967
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | errors: (none)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | pilot state: finished 
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | transexitcode: 0
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | exeerrorcode: 0
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | exeerrordiag: 
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | exitcode: 0
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | exitmsg: OK
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | cpuconsumptiontime: 139106 s
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | nevents: 1000
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | neventsw: 0
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | pid: 1997144
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | pgrp: 1997144
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | corecount: 8
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | event service: False
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | sizes: {0: 2298646, 1: 2298845, 7: 2299107, 12: 2299135, 80502: 2362199, 80515: 2371221, 80517: 2371405, 80525: 2371651}
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | --------------------------------------------------
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | 
[2025-11-22 20:15:43] 2025-11-23 04:14:45,668 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc503/slots/9
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:15:43] 2025-11-23 04:14:45,699 | INFO     | job 6894237906 has completed (purged errors)
[2025-11-22 20:15:43] 2025-11-23 04:14:45,699 | INFO     | overall cleanup function is called
[2025-11-22 20:15:43] 2025-11-23 04:14:46,231 | INFO     | PID=1932838 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 20:15:43] 2025-11-23 04:14:46,231 | INFO     | .. there are 7 such processes running
[2025-11-22 20:15:43] 2025-11-23 04:14:46,734 | INFO     | --- collectZombieJob: --- 10, [1997144]
[2025-11-22 20:15:43] 2025-11-23 04:14:46,735 | INFO     | zombie collector waiting for pid 1997144
[2025-11-22 20:15:43] 2025-11-23 04:14:46,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:15:43] 2025-11-23 04:14:46,735 | INFO     | collected zombie processes
[2025-11-22 20:15:43] 2025-11-23 04:14:46,735 | INFO     | will attempt to kill all subprocesses of pid=1997144
[2025-11-22 20:15:43] 2025-11-23 04:14:47,056 | INFO     | process IDs to be killed: [1997144] (in reverse order)
[2025-11-22 20:15:43] 2025-11-23 04:14:47,161 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:15:43] 2025-11-23 04:14:47,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:15:43] 2025-11-23 04:14:47,166 | INFO     | did not find any defunct processes belonging to 1997144
[2025-11-22 20:15:43] 2025-11-23 04:14:47,173 | INFO     | did not find any defunct processes belonging to 1997144
[2025-11-22 20:15:43] 2025-11-23 04:14:47,173 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:15:43] 2025-11-23 04:14:47,174 | INFO     | ready for new job
[2025-11-22 20:15:43] 2025-11-23 04:14:47,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:15:43] 2025-11-23 04:14:47,177 | INFO     | ***************************************
[2025-11-22 20:15:43] 2025-11-23 04:14:47,177 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:15:43] 2025-11-23 04:14:47,177 | INFO     | ***************************************
[2025-11-22 20:15:43] 2025-11-23 04:14:47,177 | INFO     | 
[2025-11-22 20:15:43] 2025-11-23 04:14:47,178 | INFO     | architecture information:
[2025-11-22 20:15:43] 2025-11-23 04:14:47,178 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:15:43] 2025-11-23 04:14:47,198 | INFO     | cat /etc/os-release:
[2025-11-22 20:15:43] NAME="CentOS Linux"
[2025-11-22 20:15:43] VERSION="7 (Core)"
[2025-11-22 20:15:43] ID="centos"
[2025-11-22 20:15:43] ID_LIKE="rhel fedora"
[2025-11-22 20:15:43] VERSION_ID="7"
[2025-11-22 20:15:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:15:43] ANSI_COLOR="0;31"
[2025-11-22 20:15:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:15:43] HOME_URL="https://www.centos.org/"
[2025-11-22 20:15:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:15:43] 
[2025-11-22 20:15:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:15:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:15:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:15:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:15:43] 
[2025-11-22 20:15:43] 2025-11-23 04:14:47,198 | INFO     | ***************************************
[2025-11-22 20:15:43] 2025-11-23 04:14:47,701 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc503/slots/9
[2025-11-22 20:15:43] 2025-11-23 04:14:47,725 | INFO     | sufficient remaining disk space (190086905856 B)
[2025-11-22 20:15:43] 2025-11-23 04:14:47,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:15:43] 2025-11-23 04:14:47,725 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:15:43] 2025-11-23 04:14:47,725 | INFO     | update_server=False
[2025-11-22 20:15:43] 2025-11-23 04:14:47,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:15:43] 2025-11-23 04:14:47,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:15:43] 2025-11-23 04:14:47,743 | INFO     | aborting loop
[2025-11-22 20:15:43] 2025-11-23 04:14:48,252 | INFO     | all job control threads have been joined
[2025-11-22 20:15:43] 2025-11-23 04:14:48,566 | INFO     | all payload control threads have been joined
[2025-11-22 20:15:43] 2025-11-23 04:14:48,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:15:43] 2025-11-23 04:14:48,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:15:43] 2025-11-23 04:14:48,716 | INFO     | all data control threads have been joined
[2025-11-22 20:15:43] 2025-11-23 04:14:48,729 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:48,747 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,028 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,073 | INFO     | [job] validate thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,187 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,257 | INFO     | [job] control thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,347 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,522 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,571 | INFO     | [payload] control thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,616 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,721 | INFO     | [data] control thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:49,869 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:50,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:15:43] 2025-11-23 04:14:50,600 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:51,434 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:14:52,693 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:15:43] 2025-11-23 04:15:18,548 | INFO     | PID=1932838 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 20:15:43] 2025-11-23 04:15:18,548 | INFO     | .. there are 7 such processes running
[2025-11-22 20:15:43] 2025-11-23 04:15:18,549 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:15:43] 2025-11-23 04:15:18,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:15:43] 2025-11-23 04:15:18,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:15:43] 2025-11-23 04:15:37,589 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:15:43] 2025-11-23 04:15:37,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133036907702080)>', '<ExcThread(monitor, started 133036125443840)>']
[2025-11-22 20:15:43] 2025-11-23 04:15:38,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:15:43] 2025-11-23 04:15:38,653 | INFO     | [monitor] control thread has ended
[2025-11-22 20:15:43] 2025-11-23 04:15:42,979 | INFO     | all workflow threads have been joined
[2025-11-22 20:15:43] 2025-11-23 04:15:42,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:15:43] 2025-11-23 04:15:42,980 | INFO     | traces error code: 0
[2025-11-22 20:15:43] 2025-11-23 04:15:42,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:15:43] 2025-11-23 04:15:43,063 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:15:43] 2025-11-23 04:15:43,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:15:43] 2025-11-23 04:15:43,067 [wrapper] pilotpid: 1932838
[2025-11-22 20:15:43] 2025-11-23 04:15:43,068 [wrapper] Pilot exit status: 0
[2025-11-22 20:15:43] 2025-11-23 04:15:43,075 [wrapper] pandaids: 6894237906
[2025-11-22 20:15:43] 2025-11-23 04:15:43,114 [wrapper] cleanup supervisor_pilot 4114234 1932841
[2025-11-22 20:15:43] 2025-11-23 04:15:43,116 [wrapper] Test setup, not cleaning
[2025-11-22 20:15:43] 2025-11-23 04:15:43,118 [wrapper] apfmon messages muted
[2025-11-22 20:15:43] 2025-11-23 04:15:43,120 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:15:43] 2025-11-23 04:15:43,122 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:15:43]  *** Error codes and diagnostics ***
[2025-11-22 20:15:43]     "exeErrorCode": 0,
[2025-11-22 20:15:43]     "exeErrorDiag": "",
[2025-11-22 20:15:43]     "pilotErrorCode": 0,
[2025-11-22 20:15:43]     "pilotErrorDiag": "",
[2025-11-22 20:15:43]  *** Listing of results directory ***
[2025-11-22 20:15:43] total 1343916
[2025-11-22 20:15:43] -rw-r--r-- 1 root root    576529 Nov 20 16:06 pilot3.tar.gz
[2025-11-22 20:15:43] -rwx------ 1 4871 1028     36292 Nov 20 16:13 runpilot2-wrapper.sh
[2025-11-22 20:15:43] -rw-r--r-- 1 root root      5112 Nov 20 16:13 queuedata.json
[2025-11-22 20:15:43] -rw-r--r-- 1 root root       100 Nov 21 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:15:43] -rwxr-xr-x 1 root root      7986 Nov 21 21:51 run_atlas
[2025-11-22 20:15:43] -rw-r--r-- 1 root root       105 Nov 21 21:51 job.xml
[2025-11-22 20:15:43] -rw-r--r-- 1 root root      7071 Nov 21 21:51 init_data.xml
[2025-11-22 20:15:43] -rw-r--r-- 2 root root 410885329 Nov 21 21:51 EVNT.47493127._002035.pool.root.1
[2025-11-22 20:15:43] -rw-r--r-- 2 root root     15847 Nov 21 21:51 start_atlas.sh
[2025-11-22 20:15:43] drwxrwx--x 2 root root      4096 Nov 21 21:51 shared
[2025-11-22 20:15:43] -rw-r--r-- 2 root root    590102 Nov 21 21:51 input.tar.gz
[2025-11-22 20:15:43] -rw-r--r-- 1 root root         0 Nov 21 21:51 boinc_lockfile
[2025-11-22 20:15:43] -rw-r--r-- 1 root root      2784 Nov 21 21:51 pandaJob.out
[2025-11-22 20:15:43] -rw------- 1 root root    989752 Nov 21 21:52 agis_schedconf.cvmfs.json
[2025-11-22 20:15:43] drwxr-xr-x 5  320  320      4096 Nov 21 21:52 pilot3
[2025-11-22 20:15:43] -rw-r--r-- 1 root root       533 Nov 22 20:08 boinc_task_state.xml
[2025-11-22 20:15:43] -rw------- 1 root root 934109858 Nov 22 20:13 HITS.47533967._000070.pool.root.1
[2025-11-22 20:15:43] -rw------- 1 root root      1077 Nov 22 20:14 memory_monitor_summary.json
[2025-11-22 20:15:43] -rw------- 1 root root   1526164 Nov 22 20:14 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:15:43] -rw------- 1 root root   2386488 Nov 22 20:14 log.47533967._000070.job.log.tgz.1
[2025-11-22 20:15:43] -rw------- 1 root root      8615 Nov 22 20:14 heartbeat.json
[2025-11-22 20:15:43] -rw------- 1 root root        95 Nov 22 20:15 pilot_heartbeat.json
[2025-11-22 20:15:43] -rw-r--r-- 1 root root      8192 Nov 22 20:15 boinc_mmap_file
[2025-11-22 20:15:43] -rw-r--r-- 1 root root        29 Nov 22 20:15 wrapper_checkpoint.txt
[2025-11-22 20:15:43] -rw------- 1 root root      4838 Nov 22 20:15 pilotlog.txt
[2025-11-22 20:15:43] -rw------- 1 root root  11245533 Nov 22 20:15 log.47533967._000070.job.log.1
[2025-11-22 20:15:43] -rw------- 1 root root       353 Nov 22 20:15 output.list
[2025-11-22 20:15:43] -rw-r--r-- 1 root root       620 Nov 22 20:15 runtime_log
[2025-11-22 20:15:43] -rw------- 1 root root  13649920 Nov 22 20:15 result.tar.gz
[2025-11-22 20:15:43] -rw-r--r-- 1 root root      9019 Nov 22 20:15 runtime_log.err
[2025-11-22 20:15:43] -rw------- 1 root root       664 Nov 22 20:15 EjJMDmNxTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTCHKDmiS6SMo.diag
[2025-11-22 20:15:43] -rw-r--r-- 1 root root      8779 Nov 22 20:15 stderr.txt
[2025-11-22 20:15:43] HITS file was successfully produced:
[2025-11-22 20:15:43] -rw------- 1 root root 934109858 Nov 22 20:13 shared/HITS.pool.root.1
[2025-11-22 20:15:43]  *** Contents of shared directory: ***
[2025-11-22 20:15:43] total 1327412
[2025-11-22 20:15:43] -rw-r--r-- 2 root root 410885329 Nov 21 21:51 ATLAS.root_0
[2025-11-22 20:15:43] -rw-r--r-- 2 root root     15847 Nov 21 21:51 start_atlas.sh
[2025-11-22 20:15:43] -rw-r--r-- 2 root root    590102 Nov 21 21:51 input.tar.gz
[2025-11-22 20:15:43] -rw------- 1 root root 934109858 Nov 22 20:13 HITS.pool.root.1
[2025-11-22 20:15:43] -rw------- 1 root root  13649920 Nov 22 20:15 result.tar.gz
20:15:45 (1895615): run_atlas exited; CPU time 139770.962137
20:15:45 (1895615): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN