Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:09 (2823092): wrapper (7.7.26015): starting
00:11:09 (2823092): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:11:09] Arguments: --nthreads 8
[2025-11-21 00:11:09] Threads: 8
[2025-11-21 00:11:09] Checking for CVMFS
[2025-11-21 00:11:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:11:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:11:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:11:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:11:11] 2.13.2.0 5239 26101 165872 153109 3 57 25705797 39288832 6305 16776704 0 14482010 99.655 12389725 34274 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:11:11] CVMFS is ok
[2025-11-21 00:11:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:11:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:11:11] Further information can be found at the LHC@home message board.
[2025-11-21 00:11:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:11:11] Checking for apptainer binary...
[2025-11-21 00:11:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:11:11] Running /usr/bin/apptainer --version
[2025-11-21 00:11:11] apptainer version 1.4.4-1.el9
[2025-11-21 00:11:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:11:12] c-210-6.aglt2.org
[2025-11-21 00:11:12] apptainer works
[2025-11-21 00:11:12] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:11:12] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:11:12] Starting ATLAS job with PandaID=6894237911
[2025-11-21 00:11:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 19:47:42]  *** The last 200 lines of the pilot log: ***
[2025-11-21 19:47:42] 2025-11-22 00:46:55,602 | INFO     | monitor loop #4710: job 0:6894237911 is in state 'finished'
[2025-11-21 19:47:42] 2025-11-22 00:46:55,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:47:42] 2025-11-22 00:46:56,834 | INFO     | time since job start (70481s) is within the limit (172800.0s)
[2025-11-21 19:47:42] 2025-11-22 00:46:58,112 | INFO     | monitor loop #4711: job 0:6894237911 is in state 'finished'
[2025-11-21 19:47:42] 2025-11-22 00:46:58,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:47:42] 2025-11-22 00:46:58,840 | INFO     | time since job start (70483s) is within the limit (172800.0s)
[2025-11-21 19:47:42] 2025-11-22 00:47:00,617 | INFO     | monitor loop #4712: job 0:6894237911 is in state 'finished'
[2025-11-21 19:47:42] 2025-11-22 00:47:00,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:47:42] 2025-11-22 00:47:00,851 | INFO     | time since job start (70485s) is within the limit (172800.0s)
[2025-11-21 19:47:42] 2025-11-22 00:47:02,514 | INFO     | PID=2826896 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 19:47:42] 2025-11-22 00:47:02,515 | INFO     | .. there are 9 such processes running
[2025-11-21 19:47:42] 2025-11-22 00:47:03,125 | INFO     | monitor loop #4713: job 0:6894237911 is in state 'finished'
[2025-11-21 19:47:42] 2025-11-22 00:47:03,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:47:42] 2025-11-22 00:47:03,516 | INFO     | time since job start (70488s) is within the limit (172800.0s)
[2025-11-21 19:47:42] 2025-11-22 00:47:04,588 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 19:47:42] 2025-11-22 00:47:04,598 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2598.3108249999996
[2025-11-21 19:47:42] 2025-11-22 00:47:04,640 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6894237911/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 19:47:42] 2025-11-22 00:47:04,641 | INFO     | extracted standard info from prmon json
[2025-11-21 19:47:42] 2025-11-22 00:47:04,641 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 19:47:42] 2025-11-22 00:47:04,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 19:47:42] 2025-11-22 00:47:04,674 | INFO     | fitting pss+swap vs Time
[2025-11-21 19:47:42] 2025-11-22 00:47:04,713 | INFO     | sum of square deviations: 475342457307.1208
[2025-11-21 19:47:42] 2025-11-22 00:47:04,788 | INFO     | sum of deviations: 748476080129.5391
[2025-11-21 19:47:42] 2025-11-22 00:47:04,792 | INFO     | mean x: 1763737206.097138
[2025-11-21 19:47:42] 2025-11-22 00:47:04,792 | INFO     | mean y: 2870950.557675629
[2025-11-21 19:47:42] 2025-11-22 00:47:04,793 | INFO     | intersect: -2774316506.832184
[2025-11-21 19:47:42] 2025-11-22 00:47:04,794 | INFO     | chi2: 39.994252440254485
[2025-11-21 19:47:42] 2025-11-22 00:47:04,796 | INFO     | sum of square deviations: 469186558410.03644
[2025-11-21 19:47:42] 2025-11-22 00:47:04,867 | INFO     | sum of deviations: 1209829914943.249
[2025-11-21 19:47:42] 2025-11-22 00:47:04,867 | INFO     | mean x: 1763737053.6062717
[2025-11-21 19:47:42] 2025-11-22 00:47:04,868 | INFO     | mean y: 2882379.104529617
[2025-11-21 19:47:42] 2025-11-22 00:47:04,868 | INFO     | intersect: -4545035312.267014
[2025-11-21 19:47:42] 2025-11-22 00:47:04,876 | INFO     | chi2: 35.02152573755342
[2025-11-21 19:47:42] 2025-11-22 00:47:04,877 | INFO     | current chi2=35.02152573755342 (change=12.433603328702262 %)
[2025-11-21 19:47:42] 2025-11-22 00:47:04,878 | INFO     | right removable region: 1147
[2025-11-21 19:47:42] 2025-11-22 00:47:04,880 | INFO     | sum of square deviations: 469185083430.037
[2025-11-21 19:47:42] 2025-11-22 00:47:04,980 | INFO     | sum of deviations: 292749177606.39734
[2025-11-21 19:47:42] 2025-11-22 00:47:04,985 | INFO     | mean x: 1763737358.6062717
[2025-11-21 19:47:42] 2025-11-22 00:47:04,985 | INFO     | mean y: 2882236.4721254357
[2025-11-21 19:47:42] 2025-11-22 00:47:04,985 | INFO     | intersect: -1097605991.906642
[2025-11-21 19:47:42] 2025-11-22 00:47:04,987 | INFO     | chi2: 36.15222435199802
[2025-11-21 19:47:42] 2025-11-22 00:47:04,987 | INFO     | current chi2=36.15222435199802 (change=9.606450561854823 %)
[2025-11-21 19:47:42] 2025-11-22 00:47:04,987 | INFO     | left removable region: 10
[2025-11-21 19:47:42] 2025-11-22 00:47:04,988 | INFO     | sum of square deviations: 455828258579.76276
[2025-11-21 19:47:42] 2025-11-22 00:47:05,091 | INFO     | sum of deviations: 456529723975.8678
[2025-11-21 19:47:42] 2025-11-22 00:47:05,092 | INFO     | mean x: 1763737328.1266491
[2025-11-21 19:47:42] 2025-11-22 00:47:05,092 | INFO     | mean y: 2905935.535620053
[2025-11-21 19:47:42] 2025-11-22 00:47:05,092 | INFO     | intersect: -1763545574.2597008
[2025-11-21 19:47:42] 2025-11-22 00:47:05,093 | INFO     | chi2: 27.393682974429137
[2025-11-21 19:47:42] 2025-11-22 00:47:05,094 | INFO     | current memory leak: 1.00 B/s (using 1137 data points, chi2=27.39)
[2025-11-21 19:47:42] 2025-11-22 00:47:05,096 | INFO     | could have reported an average CPU frequency of 2599 MHz (42 samples)
[2025-11-21 19:47:42] 2025-11-22 00:47:05,096 | INFO     | ..............................
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . Timing measurements:
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . get job = 0 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . initial setup = 3 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . payload setup = 40 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . stage-in = 0 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . payload execution = 70332 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . stage-out = 6 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,097 | INFO     | . log creation = 1 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,098 | INFO     | ..............................
[2025-11-21 19:47:42] 2025-11-22 00:47:05,583 | INFO     | 
[2025-11-21 19:47:42] 2025-11-22 00:47:05,583 | INFO     | job summary report
[2025-11-21 19:47:42] 2025-11-22 00:47:05,583 | INFO     | --------------------------------------------------
[2025-11-21 19:47:42] 2025-11-22 00:47:05,583 | INFO     | PanDA job id: 6894237911
[2025-11-21 19:47:42] 2025-11-22 00:47:05,583 | INFO     | task id: 47533967
[2025-11-21 19:47:42] 2025-11-22 00:47:05,583 | INFO     | errors: (none)
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | pilot state: finished 
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | transexitcode: 0
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | exeerrorcode: 0
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | exeerrordiag: 
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | exitcode: 0
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | exitmsg: OK
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | cpuconsumptiontime: 306640 s
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | nevents: 1000
[2025-11-21 19:47:42] 2025-11-22 00:47:05,584 | INFO     | neventsw: 0
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | pid: 2833727
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | pgrp: 2833727
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | corecount: 8
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | event service: False
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | sizes: {0: 2297975, 1: 2298660, 2: 2298859, 3: 2298887, 14: 2298887, 25: 2298915, 32: 2299333, 35: 2299361, 70376: 2357717, 70377: 2357716, 70385: 2366794, 70389: 
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | --------------------------------------------------
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | 
[2025-11-21 19:47:42] 2025-11-22 00:47:05,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-21 19:47:42] 2025-11-22 00:47:05,598 | INFO     | time since job start (70490s) is within the limit (172800.0s)
[2025-11-21 19:47:42] 2025-11-22 00:47:05,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 19:47:42] 2025-11-22 00:47:05,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 19:47:42] 2025-11-22 00:47:05,684 | INFO     | job 6894237911 has completed (purged errors)
[2025-11-21 19:47:42] 2025-11-22 00:47:05,684 | INFO     | overall cleanup function is called
[2025-11-21 19:47:42] 2025-11-22 00:47:06,729 | INFO     | --- collectZombieJob: --- 10, [2833727]
[2025-11-21 19:47:42] 2025-11-22 00:47:06,729 | INFO     | zombie collector waiting for pid 2833727
[2025-11-21 19:47:42] 2025-11-22 00:47:06,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 19:47:42] 2025-11-22 00:47:06,729 | INFO     | collected zombie processes
[2025-11-21 19:47:42] 2025-11-22 00:47:06,729 | INFO     | will attempt to kill all subprocesses of pid=2833727
[2025-11-21 19:47:42] 2025-11-22 00:47:07,333 | INFO     | process IDs to be killed: [2833727] (in reverse order)
[2025-11-21 19:47:42] 2025-11-22 00:47:07,500 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 19:47:42] 2025-11-22 00:47:07,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 19:47:42] 2025-11-22 00:47:07,518 | INFO     | did not find any defunct processes belonging to 2833727
[2025-11-21 19:47:42] 2025-11-22 00:47:07,533 | INFO     | did not find any defunct processes belonging to 2833727
[2025-11-21 19:47:42] 2025-11-22 00:47:07,535 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 19:47:42] 2025-11-22 00:47:07,535 | INFO     | ready for new job
[2025-11-21 19:47:42] 2025-11-22 00:47:07,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 19:47:42] 2025-11-22 00:47:07,544 | INFO     | ***************************************
[2025-11-21 19:47:42] 2025-11-22 00:47:07,544 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 19:47:42] 2025-11-22 00:47:07,544 | INFO     | ***************************************
[2025-11-21 19:47:42] 2025-11-22 00:47:07,545 | INFO     | 
[2025-11-21 19:47:42] 2025-11-22 00:47:07,550 | INFO     | architecture information:
[2025-11-21 19:47:42] 2025-11-22 00:47:07,551 | INFO     | executing command: cat /etc/os-release
[2025-11-21 19:47:42] 2025-11-22 00:47:07,655 | INFO     | cat /etc/os-release:
[2025-11-21 19:47:42] NAME="CentOS Linux"
[2025-11-21 19:47:42] VERSION="7 (Core)"
[2025-11-21 19:47:42] ID="centos"
[2025-11-21 19:47:42] ID_LIKE="rhel fedora"
[2025-11-21 19:47:42] VERSION_ID="7"
[2025-11-21 19:47:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 19:47:42] ANSI_COLOR="0;31"
[2025-11-21 19:47:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 19:47:42] HOME_URL="https://www.centos.org/"
[2025-11-21 19:47:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 19:47:42] 
[2025-11-21 19:47:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 19:47:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 19:47:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 19:47:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 19:47:42] 
[2025-11-21 19:47:42] 2025-11-22 00:47:07,655 | INFO     | ***************************************
[2025-11-21 19:47:42] 2025-11-22 00:47:08,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-21 19:47:42] 2025-11-22 00:47:08,214 | INFO     | sufficient remaining disk space (49207574528 B)
[2025-11-21 19:47:42] 2025-11-22 00:47:08,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 19:47:42] 2025-11-22 00:47:08,215 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 19:47:42] 2025-11-22 00:47:08,215 | INFO     | update_server=False
[2025-11-21 19:47:42] 2025-11-22 00:47:08,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 19:47:42] 2025-11-22 00:47:08,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 19:47:42] 2025-11-22 00:47:08,224 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 19:47:42] 2025-11-22 00:47:08,224 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 19:47:42] 2025-11-22 00:47:08,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:47:42] 2025-11-22 00:47:08,224 | INFO     | will abort loop
[2025-11-21 19:47:42] 2025-11-22 00:47:08,943 | INFO     | all payload control threads have been joined
[2025-11-21 19:47:42] 2025-11-22 00:47:09,221 | INFO     | [job] retrieve thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,235 | INFO     | all data control threads have been joined
[2025-11-21 19:47:42] 2025-11-22 00:47:09,244 | INFO     | [job] job monitor thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,277 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,419 | INFO     | [payload] validate_post thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,420 | INFO     | [job] validate thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,548 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,921 | INFO     | [payload] failed_post thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,949 | INFO     | [payload] control thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:09,950 | INFO     | all job control threads have been joined
[2025-11-21 19:47:42] 2025-11-22 00:47:10,224 | INFO     | [data] copytool_out thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:10,240 | INFO     | [data] control thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:10,342 | INFO     | [data] copytool_in thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:10,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 19:47:42] 2025-11-22 00:47:10,595 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:10,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:47:42] 2025-11-22 00:47:10,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:10,957 | INFO     | [job] control thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:11,609 | INFO     | [job] queue monitor thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:14,475 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 19:47:42] 2025-11-22 00:47:17,648 | INFO     | [monitor] cgroup control has ended
[2025-11-21 19:47:42] 2025-11-22 00:47:17,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335655569216)>', '<ExcThread(monitor, started 140335170713344)>']
[2025-11-21 19:47:42] 2025-11-22 00:47:22,844 | INFO     | all workflow threads have been joined
[2025-11-21 19:47:42] 2025-11-22 00:47:22,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 19:47:42] 2025-11-22 00:47:22,844 | INFO     | traces error code: 0
[2025-11-21 19:47:42] 2025-11-22 00:47:22,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 19:47:42] 2025-11-22 00:47:39,862 | INFO     | PID=2826896 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 19:47:42] 2025-11-22 00:47:39,863 | INFO     | .. there are 9 such processes running
[2025-11-21 19:47:42] 2025-11-22 00:47:39,871 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 19:47:42] 2025-11-22 00:47:39,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 19:47:42] 2025-11-22 00:47:39,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 19:47:42] 2025-11-22 00:47:39,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 19:47:42] 2025-11-22 00:47:39,871 | INFO     | [monitor] control thread has ended
[2025-11-21 19:47:42] 2025-11-22 00:47:40,360 [wrapper] ==== pilot stdout END ====
[2025-11-21 19:47:42] 2025-11-22 00:47:40,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 19:47:42] 2025-11-22 00:47:40,378 [wrapper] pilotpid: 2826896
[2025-11-21 19:47:42] 2025-11-22 00:47:40,381 [wrapper] Pilot exit status: 0
[2025-11-21 19:47:42] 2025-11-22 00:47:40,439 [wrapper] pandaids: 6894237911
[2025-11-21 19:47:42] 2025-11-22 00:47:40,865 [wrapper] cleanup supervisor_pilot  278784 2826897
[2025-11-21 19:47:42] 2025-11-22 00:47:40,907 [wrapper] Test setup, not cleaning
[2025-11-21 19:47:42] 2025-11-22 00:47:40,925 [wrapper] apfmon messages muted
[2025-11-21 19:47:42] 2025-11-22 00:47:40,937 [wrapper] ==== wrapper stdout END ====
[2025-11-21 19:47:42] 2025-11-22 00:47:40,989 [wrapper] ==== wrapper stderr END ====
[2025-11-21 19:47:42]  *** Error codes and diagnostics ***
[2025-11-21 19:47:42]     "exeErrorCode": 0,
[2025-11-21 19:47:42]     "exeErrorDiag": "",
[2025-11-21 19:47:42]     "pilotErrorCode": 0,
[2025-11-21 19:47:42]     "pilotErrorDiag": "",
[2025-11-21 19:47:42]  *** Listing of results directory ***
[2025-11-21 19:47:42] total 1337720
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-21 19:47:42] -rwx------. 1 boincer umatlas     36292 Nov 20 19:13 runpilot2-wrapper.sh
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 19:13 queuedata.json
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 19:47:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:11 run_atlas
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:11 job.xml
[2025-11-21 19:47:42] -rw-r--r--. 2 boincer umatlas 411072301 Nov 21 00:11 EVNT.47493127._002036.pool.root.1
[2025-11-21 19:47:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:11 start_atlas.sh
[2025-11-21 19:47:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:11 shared
[2025-11-21 19:47:42] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 00:11 input.tar.gz
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:11 boinc_lockfile
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 00:11 pandaJob.out
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas        57 Nov 21 00:11 setup.sh.local
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas    989817 Nov 21 00:12 agis_schedconf.cvmfs.json
[2025-11-21 19:47:42] drwx------. 5 boincer umatlas      4096 Nov 21 00:12 pilot3
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas       533 Nov 21 18:57 boinc_task_state.xml
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas 931292489 Nov 21 19:37 HITS.47533967._000075.pool.root.1
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas      6662 Nov 21 19:46 init_data.xml
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas      1056 Nov 21 19:46 memory_monitor_summary.json
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas   1526164 Nov 21 19:46 agis_ddmendpoints.agis.ALL.json
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas   2291050 Nov 21 19:46 log.47533967._000075.job.log.tgz.1
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas      8632 Nov 21 19:47 heartbeat.json
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 19:47 boinc_mmap_file
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas        29 Nov 21 19:47 wrapper_checkpoint.txt
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas        95 Nov 21 19:47 pilot_heartbeat.json
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas       822 Nov 21 19:47 pilotlog.txt
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas   9477891 Nov 21 19:47 log.47533967._000075.job.log.1
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas       353 Nov 21 19:47 output.list
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas       620 Nov 21 19:47 runtime_log
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas  11786240 Nov 21 19:47 result.tar.gz
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas       659 Nov 21 19:47 rZPMDmNxTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXCHKDmtYi9Tn.diag
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 19:47 runtime_log.err
[2025-11-21 19:47:42] -rw-r--r--. 1 boincer umatlas     21859 Nov 21 19:47 stderr.txt
[2025-11-21 19:47:42] HITS file was successfully produced:
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas 931292489 Nov 21 19:37 shared/HITS.pool.root.1
[2025-11-21 19:47:42]  *** Contents of shared directory: ***
[2025-11-21 19:47:42] total 1323024
[2025-11-21 19:47:42] -rw-r--r--. 2 boincer umatlas 411072301 Nov 21 00:11 ATLAS.root_0
[2025-11-21 19:47:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:11 start_atlas.sh
[2025-11-21 19:47:42] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 00:11 input.tar.gz
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas 931292489 Nov 21 19:37 HITS.pool.root.1
[2025-11-21 19:47:42] -rw-------. 1 boincer umatlas  11786240 Nov 21 19:47 result.tar.gz
19:48:04 (2823092): run_atlas exited; CPU time 307563.573759
19:48:04 (2823092): called boinc_finish(0)

</stderr_txt>
]]>

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