Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:32 (1559559): wrapper (7.7.26015): starting
00:19:32 (1559559): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:19:32] Arguments: --nthreads 8
[2025-11-21 00:19:32] Threads: 8
[2025-11-21 00:19:32] Checking for CVMFS
[2025-11-21 00:19:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:19:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:19:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:19:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:19:34] 2.13.2.0 5784 25247 171132 153110 1 57 31873774 39288832 5826 16776704 0 12981134 99.670 9695954 33592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:19:34] CVMFS is ok
[2025-11-21 00:19:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:19:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:19:34] Further information can be found at the LHC@home message board.
[2025-11-21 00:19:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:19:34] Checking for apptainer binary...
[2025-11-21 00:19:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:19:34] Running /usr/bin/apptainer --version
[2025-11-21 00:19:34] apptainer version 1.4.4-1.el9
[2025-11-21 00:19:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:19:34] c-210-12.aglt2.org
[2025-11-21 00:19:34] apptainer works
[2025-11-21 00:19:35] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:19:35] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:19:35] Starting ATLAS job with PandaID=6894236473
[2025-11-21 00:19:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 15:57:10]  *** The last 200 lines of the pilot log: ***
[2025-11-21 15:57:10] 2025-11-21 20:40:52,072 | INFO     | fitting pss+swap vs Time
[2025-11-21 15:57:10] 2025-11-21 20:40:52,073 | INFO     | sum of square deviations: 228333124237.6415
[2025-11-21 15:57:10] 2025-11-21 20:40:52,095 | INFO     | sum of deviations: 1970175270730.8225
[2025-11-21 15:57:10] 2025-11-21 20:40:52,095 | INFO     | mean x: 1763730068.3056479
[2025-11-21 15:57:10] 2025-11-21 20:40:52,095 | INFO     | mean y: 2890815.7796234773
[2025-11-21 15:57:10] 2025-11-21 20:40:52,095 | INFO     | intersect: -15215476542.97318
[2025-11-21 15:57:10] 2025-11-21 20:40:52,097 | INFO     | chi2: 11.125802975819486
[2025-11-21 15:57:10] 2025-11-21 20:40:52,098 | INFO     | sum of square deviations: 224561775896.5684
[2025-11-21 15:57:10] 2025-11-21 20:40:52,119 | INFO     | sum of deviations: 2278038806219.2695
[2025-11-21 15:57:10] 2025-11-21 20:40:52,119 | INFO     | mean x: 1763729915.8129177
[2025-11-21 15:57:10] 2025-11-21 20:40:52,120 | INFO     | mean y: 2903267.114699332
[2025-11-21 15:57:10] 2025-11-21 20:40:52,120 | INFO     | intersect: -17889033933.10705
[2025-11-21 15:57:10] 2025-11-21 20:40:52,121 | INFO     | chi2: 7.921051226137844
[2025-11-21 15:57:10] 2025-11-21 20:40:52,121 | INFO     | current chi2=7.921051226137844 (change=28.804678247913984 %)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,122 | INFO     | sum of square deviations: 220832085861.67963
[2025-11-21 15:57:10] 2025-11-21 20:40:52,143 | INFO     | sum of deviations: 2434393020901.637
[2025-11-21 15:57:10] 2025-11-21 20:40:52,143 | INFO     | mean x: 1763729763.3180292
[2025-11-21 15:57:10] 2025-11-21 20:40:52,144 | INFO     | mean y: 2909659.9977603583
[2025-11-21 15:57:10] 2025-11-21 20:40:52,144 | INFO     | intersect: -19439968895.55441
[2025-11-21 15:57:10] 2025-11-21 20:40:52,145 | INFO     | chi2: 6.935507422892688
[2025-11-21 15:57:10] 2025-11-21 20:40:52,145 | INFO     | current chi2=6.935507422892688 (change=12.442083444594616 %)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,145 | INFO     | right removable region: 892
[2025-11-21 15:57:10] 2025-11-21 20:40:52,146 | INFO     | sum of square deviations: 224561056706.56876
[2025-11-21 15:57:10] 2025-11-21 20:40:52,168 | INFO     | sum of deviations: 1622127098803.9312
[2025-11-21 15:57:10] 2025-11-21 20:40:52,168 | INFO     | mean x: 1763730220.8129177
[2025-11-21 15:57:10] 2025-11-21 20:40:52,168 | INFO     | mean y: 2904882.85077951
[2025-11-21 15:57:10] 2025-11-21 20:40:52,168 | INFO     | intersect: -12737481309.30409
[2025-11-21 15:57:10] 2025-11-21 20:40:52,170 | INFO     | chi2: 7.295601337049337
[2025-11-21 15:57:10] 2025-11-21 20:40:52,170 | INFO     | current chi2=7.295601337049337 (change=34.426293968126195 %)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,171 | INFO     | sum of square deviations: 220830757400.40326
[2025-11-21 15:57:10] 2025-11-21 20:40:52,200 | INFO     | sum of deviations: 1352199453986.128
[2025-11-21 15:57:10] 2025-11-21 20:40:52,200 | INFO     | mean x: 1763730373.3202689
[2025-11-21 15:57:10] 2025-11-21 20:40:52,200 | INFO     | mean y: 2915911.4680851065
[2025-11-21 15:57:10] 2025-11-21 20:40:52,200 | INFO     | intersect: -10796826279.59892
[2025-11-21 15:57:10] 2025-11-21 20:40:52,206 | INFO     | chi2: 5.071154919686465
[2025-11-21 15:57:10] 2025-11-21 20:40:52,206 | INFO     | current chi2=5.071154919686465 (change=30.4902408258856 %)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,207 | INFO     | sum of square deviations: 217142211287.24197
[2025-11-21 15:57:10] 2025-11-21 20:40:52,252 | INFO     | sum of deviations: 1287656283869.869
[2025-11-21 15:57:10] 2025-11-21 20:40:52,252 | INFO     | mean x: 1763730525.823198
[2025-11-21 15:57:10] 2025-11-21 20:40:52,252 | INFO     | mean y: 2918579.3558558556
[2025-11-21 15:57:10] 2025-11-21 20:40:52,252 | INFO     | intersect: -10456027570.110683
[2025-11-21 15:57:10] 2025-11-21 20:40:52,254 | INFO     | chi2: 5.018848019083845
[2025-11-21 15:57:10] 2025-11-21 20:40:52,254 | INFO     | current chi2=5.018848019083845 (change=1.0314593308826339 %)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,254 | INFO     | left removable region: 30
[2025-11-21 15:57:10] 2025-11-21 20:40:52,259 | INFO     | sum of square deviations: 198623797369.93607
[2025-11-21 15:57:10] 2025-11-21 20:40:52,294 | INFO     | sum of deviations: 1662136410079.6636
[2025-11-21 15:57:10] 2025-11-21 20:40:52,294 | INFO     | mean x: 1763730647.836427
[2025-11-21 15:57:10] 2025-11-21 20:40:52,294 | INFO     | mean y: 2944641.5011600927
[2025-11-21 15:57:10] 2025-11-21 20:40:52,294 | INFO     | intersect: -14756419373.085155
[2025-11-21 15:57:10] 2025-11-21 20:40:52,300 | INFO     | chi2: 0.5301334107992404
[2025-11-21 15:57:10] 2025-11-21 20:40:52,300 | INFO     | current memory leak: 8.37 B/s (using 862 data points, chi2=0.53)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,301 | INFO     | could have reported an average CPU frequency of 2600 MHz (34 samples)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,301 | INFO     | ..............................
[2025-11-21 15:57:10] 2025-11-21 20:40:52,301 | INFO     | . Timing measurements:
[2025-11-21 15:57:10] 2025-11-21 20:40:52,301 | INFO     | . get job = 0 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,301 | INFO     | . initial setup = 3 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,302 | INFO     | . payload setup = 38 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,302 | INFO     | . stage-in = 0 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,302 | INFO     | . payload execution = 55099 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,302 | INFO     | . stage-out = 3 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,302 | INFO     | . log creation = 0 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,302 | INFO     | ..............................
[2025-11-21 15:57:10] 2025-11-21 20:40:52,472 | INFO     | time since job start (55221s) is within the limit (172800.0s)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | 
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | job summary report
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | --------------------------------------------------
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | PanDA job id: 6894236473
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | task id: 47533967
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | errors: (none)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 15:57:10] 2025-11-21 20:40:52,473 | INFO     | pilot state: finished 
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | transexitcode: 0
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | exeerrorcode: 0
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | exeerrordiag: 
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | exitcode: 0
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | exitmsg: OK
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | cpuconsumptiontime: 295832 s
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | nevents: 1000
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | neventsw: 0
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | pid: 1573270
[2025-11-21 15:57:10] 2025-11-21 20:40:52,474 | INFO     | pgrp: 1573270
[2025-11-21 15:57:10] 2025-11-21 20:40:52,475 | INFO     | corecount: 8
[2025-11-21 15:57:10] 2025-11-21 20:40:52,475 | INFO     | event service: False
[2025-11-21 15:57:10] 2025-11-21 20:40:52,475 | INFO     | sizes: {0: 2297975, 1: 2298660, 2: 2298859, 13: 2298859, 24: 2298915, 26: 2299205, 35: 2299361, 55142: 2350329, 55146: 2359323, 55149: 2359379, 55161: 2359625}
[2025-11-21 15:57:10] 2025-11-21 20:40:52,475 | INFO     | --------------------------------------------------
[2025-11-21 15:57:10] 2025-11-21 20:40:52,475 | INFO     | 
[2025-11-21 15:57:10] 2025-11-21 20:40:52,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-21 15:57:10] 2025-11-21 20:40:52,536 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 15:57:10] 2025-11-21 20:40:52,539 | INFO     | job 6894236473 has completed (purged errors)
[2025-11-21 15:57:10] 2025-11-21 20:40:52,539 | INFO     | overall cleanup function is called
[2025-11-21 15:57:10] 2025-11-21 20:40:53,567 | INFO     | --- collectZombieJob: --- 10, [1573270]
[2025-11-21 15:57:10] 2025-11-21 20:40:53,567 | INFO     | zombie collector waiting for pid 1573270
[2025-11-21 15:57:10] 2025-11-21 20:40:53,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 15:57:10] 2025-11-21 20:40:53,567 | INFO     | collected zombie processes
[2025-11-21 15:57:10] 2025-11-21 20:40:53,567 | INFO     | will attempt to kill all subprocesses of pid=1573270
[2025-11-21 15:57:10] 2025-11-21 20:40:54,392 | INFO     | PID=1564919 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 15:57:10] 2025-11-21 20:40:54,393 | INFO     | .. there are 9 such processes running
[2025-11-21 15:57:10] 2025-11-21 20:40:54,439 | INFO     | process IDs to be killed: [1573270] (in reverse order)
[2025-11-21 15:57:10] 2025-11-21 20:40:54,512 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 15:57:10] 2025-11-21 20:40:54,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 15:57:10] 2025-11-21 20:40:54,521 | INFO     | did not find any defunct processes belonging to 1573270
[2025-11-21 15:57:10] 2025-11-21 20:40:54,528 | INFO     | did not find any defunct processes belonging to 1573270
[2025-11-21 15:57:10] 2025-11-21 20:40:54,529 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 15:57:10] 2025-11-21 20:40:54,529 | INFO     | ready for new job
[2025-11-21 15:57:10] 2025-11-21 20:40:54,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 15:57:10] 2025-11-21 20:40:54,534 | INFO     | ***************************************
[2025-11-21 15:57:10] 2025-11-21 20:40:54,534 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 15:57:10] 2025-11-21 20:40:54,534 | INFO     | ***************************************
[2025-11-21 15:57:10] 2025-11-21 20:40:54,534 | INFO     | 
[2025-11-21 15:57:10] 2025-11-21 20:40:54,536 | INFO     | architecture information:
[2025-11-21 15:57:10] 2025-11-21 20:40:54,536 | INFO     | executing command: cat /etc/os-release
[2025-11-21 15:57:10] 2025-11-21 20:40:54,552 | INFO     | cat /etc/os-release:
[2025-11-21 15:57:10] NAME="CentOS Linux"
[2025-11-21 15:57:10] VERSION="7 (Core)"
[2025-11-21 15:57:10] ID="centos"
[2025-11-21 15:57:10] ID_LIKE="rhel fedora"
[2025-11-21 15:57:10] VERSION_ID="7"
[2025-11-21 15:57:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 15:57:10] ANSI_COLOR="0;31"
[2025-11-21 15:57:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 15:57:10] HOME_URL="https://www.centos.org/"
[2025-11-21 15:57:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 15:57:10] 
[2025-11-21 15:57:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 15:57:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 15:57:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 15:57:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 15:57:10] 
[2025-11-21 15:57:10] 2025-11-21 20:40:54,552 | INFO     | ***************************************
[2025-11-21 15:57:10] 2025-11-21 20:40:55,056 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-21 15:57:10] 2025-11-21 20:40:55,071 | INFO     | sufficient remaining disk space (47933554688 B)
[2025-11-21 15:57:10] 2025-11-21 20:40:55,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 15:57:10] 2025-11-21 20:40:55,072 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 15:57:10] 2025-11-21 20:40:55,072 | INFO     | update_server=False
[2025-11-21 15:57:10] 2025-11-21 20:40:55,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 15:57:10] 2025-11-21 20:40:55,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 15:57:10] 2025-11-21 20:40:55,073 | INFO     | aborting loop
[2025-11-21 15:57:10] 2025-11-21 20:40:55,073 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 15:57:10] 2025-11-21 20:40:55,073 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 15:57:10] 2025-11-21 20:40:55,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 15:57:10] 2025-11-21 20:40:55,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 15:57:10] 2025-11-21 20:40:55,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 15:57:10] 2025-11-21 20:40:55,351 | INFO     | all payload control threads have been joined
[2025-11-21 15:57:10] 2025-11-21 20:40:55,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 15:57:10] 2025-11-21 20:40:56,005 | INFO     | all data control threads have been joined
[2025-11-21 15:57:10] 2025-11-21 20:40:56,078 | INFO     | [job] retrieve thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,085 | INFO     | [payload] failed_post thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,106 | INFO     | [job] job monitor thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,234 | INFO     | all job control threads have been joined
[2025-11-21 15:57:10] 2025-11-21 20:40:56,357 | INFO     | [payload] control thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,438 | INFO     | [data] copytool_in thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,579 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:56,624 | INFO     | [payload] validate_post thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:57,011 | INFO     | [data] control thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:57,159 | INFO     | [job] validate thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:57,200 | INFO     | [data] copytool_out thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:57,240 | INFO     | [job] control thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:57,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 15:57:10] 2025-11-21 20:40:57,551 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:57,561 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:58,495 | INFO     | [job] queue monitor thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:40:59,859 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 15:57:10] 2025-11-21 20:41:06,479 | INFO     | [monitor] cgroup control has ended
[2025-11-21 15:57:10] 2025-11-21 20:41:07,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546635392832)>', '<ExcThread(monitor, started 140546152589056)>']
[2025-11-21 15:57:10] 2025-11-21 20:41:07,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 15:57:10] 2025-11-21 20:41:07,183 | INFO     | [monitor] control thread has ended
[2025-11-21 15:57:10] 2025-11-21 20:41:12,193 | INFO     | all workflow threads have been joined
[2025-11-21 15:57:10] 2025-11-21 20:41:12,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 15:57:10] 2025-11-21 20:41:12,193 | INFO     | traces error code: 0
[2025-11-21 15:57:10] 2025-11-21 20:41:12,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 15:57:10] 2025-11-21 20:41:12,356 [wrapper] ==== pilot stdout END ====
[2025-11-21 15:57:10] 2025-11-21 20:41:12,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 15:57:10] 2025-11-21 20:41:12,361 [wrapper] pilotpid: 1564919
[2025-11-21 15:57:10] 2025-11-21 20:41:12,363 [wrapper] Pilot exit status: 0
[2025-11-21 15:57:10] 2025-11-21 20:41:12,375 [wrapper] pandaids: 6894236473
[2025-11-21 15:57:10] 2025-11-21 20:41:12,423 [wrapper] cleanup supervisor_pilot 2877099 1564920
[2025-11-21 15:57:10] 2025-11-21 20:41:12,425 [wrapper] Test setup, not cleaning
[2025-11-21 15:57:10] 2025-11-21 20:41:12,433 [wrapper] apfmon messages muted
[2025-11-21 15:57:10] 2025-11-21 20:41:12,435 [wrapper] ==== wrapper stdout END ====
[2025-11-21 15:57:10] 2025-11-21 20:41:12,438 [wrapper] ==== wrapper stderr END ====
[2025-11-21 15:57:10]  *** Error codes and diagnostics ***
[2025-11-21 15:57:10]     "exeErrorCode": 0,
[2025-11-21 15:57:10]     "exeErrorDiag": "",
[2025-11-21 15:57:10]     "pilotErrorCode": 0,
[2025-11-21 15:57:10]     "pilotErrorDiag": "",
[2025-11-21 15:57:10]  *** Listing of results directory ***
[2025-11-21 15:57:10] total 1330312
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-21 15:57:10] -rwx------. 1 boincer umatlas     36292 Nov 20 19:13 runpilot2-wrapper.sh
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 19:13 queuedata.json
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 15:57:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:19 run_atlas
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:19 job.xml
[2025-11-21 15:57:10] -rw-r--r--. 2 boincer umatlas 409261689 Nov 21 00:19 EVNT.47493127._002031.pool.root.1
[2025-11-21 15:57:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:19 start_atlas.sh
[2025-11-21 15:57:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:19 shared
[2025-11-21 15:57:10] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 00:19 input.tar.gz
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:19 boinc_lockfile
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 00:19 pandaJob.out
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas        57 Nov 21 00:19 setup.sh.local
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas    989817 Nov 21 00:20 agis_schedconf.cvmfs.json
[2025-11-21 15:57:10] drwx------. 5 boincer umatlas      4096 Nov 21 00:20 pilot3
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas       533 Nov 21 15:16 boinc_task_state.xml
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas 929782468 Nov 21 15:39 HITS.47533967._000022.pool.root.1
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas      1053 Nov 21 15:40 memory_monitor_summary.json
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas   1526164 Nov 21 15:40 agis_ddmendpoints.agis.ALL.json
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas   2104990 Nov 21 15:40 log.47533967._000022.job.log.tgz.1
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas        95 Nov 21 15:40 pilot_heartbeat.json
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas      8619 Nov 21 15:40 heartbeat.json
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas      4552 Nov 21 15:41 pilotlog.txt
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas   7531381 Nov 21 15:41 log.47533967._000022.job.log.1
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas       353 Nov 21 15:41 output.list
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas       620 Nov 21 15:41 runtime_log
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas   9656320 Nov 21 15:41 result.tar.gz
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas       660 Nov 21 15:41 UmWLDmNxTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzBHKDmWxPUfn.diag
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 15:41 runtime_log.err
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas      6662 Nov 21 15:57 init_data.xml
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 15:57 boinc_mmap_file
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas        29 Nov 21 15:57 wrapper_checkpoint.txt
[2025-11-21 15:57:10] -rw-r--r--. 1 boincer umatlas     21224 Nov 21 15:57 stderr.txt
[2025-11-21 15:57:10] HITS file was successfully produced:
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas 929782468 Nov 21 15:39 shared/HITS.pool.root.1
[2025-11-21 15:57:10]  *** Contents of shared directory: ***
[2025-11-21 15:57:10] total 1317696
[2025-11-21 15:57:10] -rw-r--r--. 2 boincer umatlas 409261689 Nov 21 00:19 ATLAS.root_0
[2025-11-21 15:57:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:19 start_atlas.sh
[2025-11-21 15:57:10] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 00:19 input.tar.gz
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas 929782468 Nov 21 15:39 HITS.pool.root.1
[2025-11-21 15:57:10] -rw-------. 1 boincer umatlas   9656320 Nov 21 15:41 result.tar.gz
15:57:12 (1559559): run_atlas exited; CPU time 296723.473079
15:57:12 (1559559): called boinc_finish(0)

</stderr_txt>
]]>

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