Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:33 (1775917): wrapper (7.7.26015): starting
00:12:33 (1775917): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:12:33] Arguments: --nthreads 8
[2025-11-21 00:12:33] Threads: 8
[2025-11-21 00:12:33] Checking for CVMFS
[2025-11-21 00:12:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:12:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:12:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:12:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:12:34] 2.13.2.0 9369 25265 162140 153109 2 93 29005804 39288832 6901 16776704 0 13737899 99.545 13159990 34589 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:12:34] CVMFS is ok
[2025-11-21 00:12:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:12:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:12:34] Further information can be found at the LHC@home message board.
[2025-11-21 00:12:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:12:34] Checking for apptainer binary...
[2025-11-21 00:12:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:12:34] Running /usr/bin/apptainer --version
[2025-11-21 00:12:34] apptainer version 1.4.4-1.el9
[2025-11-21 00:12:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:12:34] c-210-23.aglt2.org
[2025-11-21 00:12:34] apptainer works
[2025-11-21 00:12:34] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:12:34] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:12:34] Starting ATLAS job with PandaID=6893877153
[2025-11-21 00:12:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 10:18:02]  *** The last 200 lines of the pilot log: ***
[2025-11-22 10:18:02] 2025-11-22 15:16:42,194 | INFO     | monitor loop #7431: job 0:6893877153 is in state 'finished'
[2025-11-22 10:18:02] 2025-11-22 15:16:42,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:18:02] 2025-11-22 15:16:44,712 | INFO     | monitor loop #7432: job 0:6893877153 is in state 'finished'
[2025-11-22 10:18:02] 2025-11-22 15:16:44,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:18:02] 2025-11-22 15:16:44,900 | INFO     | PID=1779664 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:18:02] 2025-11-22 15:16:44,900 | INFO     | .. there are 9 such processes running
[2025-11-22 10:18:02] 2025-11-22 15:16:45,902 | INFO     | time since job start (122629s) is within the limit (172800.0s)
[2025-11-22 10:18:02] 2025-11-22 15:16:46,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 10:18:02] 2025-11-22 15:16:46,716 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2568.0188999999996
[2025-11-22 10:18:02] 2025-11-22 15:16:46,992 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893877153/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 10:18:02] 2025-11-22 15:16:47,002 | INFO     | extracted standard info from prmon json
[2025-11-22 10:18:02] 2025-11-22 15:16:47,002 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 10:18:02] 2025-11-22 15:16:47,002 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 10:18:02] 2025-11-22 15:16:47,492 | INFO     | monitor loop #7433: job 0:6893877153 is in state 'finished'
[2025-11-22 10:18:02] 2025-11-22 15:16:47,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:18:02] 2025-11-22 15:16:47,648 | INFO     | fitting pss+swap vs Time
[2025-11-22 10:18:02] 2025-11-22 15:16:47,652 | INFO     | sum of square deviations: 2510965813911.798
[2025-11-22 10:18:02] 2025-11-22 15:16:48,020 | INFO     | time since job start (122632s) is within the limit (172800.0s)
[2025-11-22 10:18:02] 2025-11-22 15:16:49,204 | INFO     | sum of deviations: 3156642211448.6333
[2025-11-22 10:18:02] 2025-11-22 15:16:49,204 | INFO     | mean x: 1763763246.3077688
[2025-11-22 10:18:02] 2025-11-22 15:16:49,204 | INFO     | mean y: 2960770.350099602
[2025-11-22 10:18:02] 2025-11-22 15:16:49,204 | INFO     | intersect: -2214341226.933224
[2025-11-22 10:18:02] 2025-11-22 15:16:49,212 | INFO     | chi2: 34.79407968212396
[2025-11-22 10:18:02] 2025-11-22 15:16:49,291 | INFO     | sum of square deviations: 2492263119056.235
[2025-11-22 10:18:02] 2025-11-22 15:16:50,173 | INFO     | monitor loop #7434: job 0:6893877153 is in state 'finished'
[2025-11-22 10:18:02] 2025-11-22 15:16:50,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:18:02] 2025-11-22 15:16:50,402 | INFO     | time since job start (122634s) is within the limit (172800.0s)
[2025-11-22 10:18:02] 2025-11-22 15:16:50,977 | INFO     | sum of deviations: 3990005770095.8
[2025-11-22 10:18:02] 2025-11-22 15:16:50,978 | INFO     | mean x: 1763763093.827259
[2025-11-22 10:18:02] 2025-11-22 15:16:50,978 | INFO     | mean y: 2967564.6005991013
[2025-11-22 10:18:02] 2025-11-22 15:16:50,978 | INFO     | intersect: -2820741083.031157
[2025-11-22 10:18:02] 2025-11-22 15:16:51,030 | INFO     | chi2: 30.152484672984457
[2025-11-22 10:18:02] 2025-11-22 15:16:51,030 | INFO     | current chi2=30.152484672984457 (change=13.340186179789079 %)
[2025-11-22 10:18:02] 2025-11-22 15:16:51,030 | INFO     | right removable region: 2002
[2025-11-22 10:18:02] 2025-11-22 15:16:51,085 | INFO     | sum of square deviations: 2492253555476.2383
[2025-11-22 10:18:02] 2025-11-22 15:16:52,220 | INFO     | sum of deviations: 2350349153010.9673
[2025-11-22 10:18:02] 2025-11-22 15:16:52,220 | INFO     | mean x: 1763763398.827259
[2025-11-22 10:18:02] 2025-11-22 15:16:52,264 | INFO     | mean y: 2967341.476784823
[2025-11-22 10:18:02] 2025-11-22 15:16:52,265 | INFO     | intersect: -1660370564.667058
[2025-11-22 10:18:02] 2025-11-22 15:16:52,268 | INFO     | chi2: 30.960061024371264
[2025-11-22 10:18:02] 2025-11-22 15:16:52,291 | INFO     | current chi2=30.960061024371264 (change=11.019169619601938 %)
[2025-11-22 10:18:02] 2025-11-22 15:16:52,292 | INFO     | left removable region: 10
[2025-11-22 10:18:02] 2025-11-22 15:16:52,295 | INFO     | sum of square deviations: 2451425674932.5884
[2025-11-22 10:18:02] 2025-11-22 15:16:52,509 | INFO     | time since job start (122636s) is within the limit (172800.0s)
[2025-11-22 10:18:02] 2025-11-22 15:16:52,737 | INFO     | monitor loop #7435: job 0:6893877153 is in state 'finished'
[2025-11-22 10:18:02] 2025-11-22 15:16:52,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:18:02] 2025-11-22 15:16:53,257 | INFO     | sum of deviations: 2708078236869.184
[2025-11-22 10:18:02] 2025-11-22 15:16:53,257 | INFO     | mean x: 1763763368.370482
[2025-11-22 10:18:02] 2025-11-22 15:16:53,257 | INFO     | mean y: 2980830.560742972
[2025-11-22 10:18:02] 2025-11-22 15:16:53,257 | INFO     | intersect: -1945440140.0250914
[2025-11-22 10:18:02] 2025-11-22 15:16:53,314 | INFO     | chi2: 22.911466405963132
[2025-11-22 10:18:02] 2025-11-22 15:16:53,315 | INFO     | current memory leak: 1.10 B/s (using 1992 data points, chi2=22.91)
[2025-11-22 10:18:02] 2025-11-22 15:16:53,319 | INFO     | could have reported an average CPU frequency of 2599 MHz (70 samples)
[2025-11-22 10:18:02] 2025-11-22 15:16:53,320 | INFO     | ..............................
[2025-11-22 10:18:02] 2025-11-22 15:16:53,320 | INFO     | . Timing measurements:
[2025-11-22 10:18:02] 2025-11-22 15:16:53,320 | INFO     | . get job = 0 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,320 | INFO     | . initial setup = 4 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,321 | INFO     | . payload setup = 14 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,321 | INFO     | . stage-in = 0 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,321 | INFO     | . payload execution = 122459 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,321 | INFO     | . stage-out = 50 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,321 | INFO     | . log creation = 11 s
[2025-11-22 10:18:02] 2025-11-22 15:16:53,321 | INFO     | ..............................
[2025-11-22 10:18:02] 2025-11-22 15:16:54,767 | INFO     | time since job start (122638s) is within the limit (172800.0s)
[2025-11-22 10:18:02] 2025-11-22 15:16:55,326 | INFO     | 
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | job summary report
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | --------------------------------------------------
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | PanDA job id: 6893877153
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | task id: 47523449
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | errors: (none)
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 10:18:02] 2025-11-22 15:16:55,452 | INFO     | pilot state: finished 
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | transexitcode: 0
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | exeerrorcode: 0
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | exeerrordiag: 
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | exitcode: 0
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | exitmsg: OK
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | cpuconsumptiontime: 299967 s
[2025-11-22 10:18:02] 2025-11-22 15:16:55,453 | INFO     | nevents: 1000
[2025-11-22 10:18:02] 2025-11-22 15:16:55,454 | INFO     | neventsw: 0
[2025-11-22 10:18:02] 2025-11-22 15:16:55,454 | INFO     | pid: 1787714
[2025-11-22 10:18:02] 2025-11-22 15:16:55,454 | INFO     | pgrp: 1787714
[2025-11-22 10:18:02] 2025-11-22 15:16:55,454 | INFO     | corecount: 8
[2025-11-22 10:18:02] 2025-11-22 15:16:55,454 | INFO     | event service: False
[2025-11-22 10:18:02] 2025-11-22 15:16:55,454 | INFO     | sizes: {0: 2297928, 1: 2298784, 8: 2299046, 12: 2299074, 122480: 2379881, 122482: 2379880, 122534: 2389058, 122535: 2389114, 122619: 2389360}
[2025-11-22 10:18:02] 2025-11-22 15:16:55,455 | INFO     | --------------------------------------------------
[2025-11-22 10:18:02] 2025-11-22 15:16:55,455 | INFO     | 
[2025-11-22 10:18:02] 2025-11-22 15:16:55,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-22 10:18:02] 2025-11-22 15:16:56,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 10:18:02] 2025-11-22 15:16:56,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 10:18:02] 2025-11-22 15:16:56,150 | INFO     | job 6893877153 has completed (purged errors)
[2025-11-22 10:18:02] 2025-11-22 15:16:56,150 | INFO     | overall cleanup function is called
[2025-11-22 10:18:02] 2025-11-22 15:16:57,380 | INFO     | --- collectZombieJob: --- 10, [1787714]
[2025-11-22 10:18:02] 2025-11-22 15:16:57,381 | INFO     | zombie collector waiting for pid 1787714
[2025-11-22 10:18:02] 2025-11-22 15:16:57,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 10:18:02] 2025-11-22 15:16:57,381 | INFO     | collected zombie processes
[2025-11-22 10:18:02] 2025-11-22 15:16:57,381 | INFO     | will attempt to kill all subprocesses of pid=1787714
[2025-11-22 10:18:02] 2025-11-22 15:17:02,812 | INFO     | process IDs to be killed: [1787714] (in reverse order)
[2025-11-22 10:18:02] 2025-11-22 15:17:03,643 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 10:18:02] 2025-11-22 15:17:03,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 10:18:02] 2025-11-22 15:17:03,904 | INFO     | did not find any defunct processes belonging to 1787714
[2025-11-22 10:18:02] 2025-11-22 15:17:04,087 | INFO     | did not find any defunct processes belonging to 1787714
[2025-11-22 10:18:02] 2025-11-22 15:17:04,160 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 10:18:02] 2025-11-22 15:17:04,160 | INFO     | ready for new job
[2025-11-22 10:18:02] 2025-11-22 15:17:04,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 10:18:02] 2025-11-22 15:17:04,232 | INFO     | ***************************************
[2025-11-22 10:18:02] 2025-11-22 15:17:04,232 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 10:18:02] 2025-11-22 15:17:04,232 | INFO     | ***************************************
[2025-11-22 10:18:02] 2025-11-22 15:17:04,232 | INFO     | 
[2025-11-22 10:18:02] 2025-11-22 15:17:04,234 | INFO     | architecture information:
[2025-11-22 10:18:02] 2025-11-22 15:17:04,276 | INFO     | executing command: cat /etc/os-release
[2025-11-22 10:18:02] 2025-11-22 15:17:04,472 | INFO     | cat /etc/os-release:
[2025-11-22 10:18:02] NAME="CentOS Linux"
[2025-11-22 10:18:02] VERSION="7 (Core)"
[2025-11-22 10:18:02] ID="centos"
[2025-11-22 10:18:02] ID_LIKE="rhel fedora"
[2025-11-22 10:18:02] VERSION_ID="7"
[2025-11-22 10:18:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 10:18:02] ANSI_COLOR="0;31"
[2025-11-22 10:18:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 10:18:02] HOME_URL="https://www.centos.org/"
[2025-11-22 10:18:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 10:18:02] 
[2025-11-22 10:18:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 10:18:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 10:18:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 10:18:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 10:18:02] 
[2025-11-22 10:18:02] 2025-11-22 15:17:04,472 | INFO     | ***************************************
[2025-11-22 10:18:02] 2025-11-22 15:17:04,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-22 10:18:02] 2025-11-22 15:17:05,205 | INFO     | sufficient remaining disk space (48315236352 B)
[2025-11-22 10:18:02] 2025-11-22 15:17:05,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 10:18:02] 2025-11-22 15:17:05,205 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 10:18:02] 2025-11-22 15:17:05,206 | INFO     | update_server=False
[2025-11-22 10:18:02] 2025-11-22 15:17:05,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 10:18:02] 2025-11-22 15:17:05,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:18:02] 2025-11-22 15:17:05,229 | INFO     | aborting loop
[2025-11-22 10:18:02] 2025-11-22 15:17:05,293 | INFO     | all job control threads have been joined
[2025-11-22 10:18:02] 2025-11-22 15:17:05,402 | INFO     | all data control threads have been joined
[2025-11-22 10:18:02] 2025-11-22 15:17:05,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 10:18:02] 2025-11-22 15:17:05,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 10:18:02] 2025-11-22 15:17:06,211 | INFO     | [job] retrieve thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,233 | INFO     | [payload] validate_post thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,241 | INFO     | [job] job monitor thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,246 | INFO     | [payload] failed_post thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,307 | INFO     | [job] validate thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,506 | INFO     | [job] control thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,552 | INFO     | [data] control thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,712 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:06,724 | INFO     | all payload control threads have been joined
[2025-11-22 10:18:02] 2025-11-22 15:17:07,024 | INFO     | [data] copytool_in thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:07,152 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:07,528 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:07,729 | INFO     | [payload] control thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:07,999 | INFO     | [data] copytool_out thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:08,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:18:02] 2025-11-22 15:17:09,156 | INFO     | [job] queue monitor thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:09,730 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 10:18:02] 2025-11-22 15:17:37,917 | INFO     | PID=1779664 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:18:02] 2025-11-22 15:17:37,917 | INFO     | .. there are 9 such processes running
[2025-11-22 10:18:02] 2025-11-22 15:17:37,970 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 10:18:02] 2025-11-22 15:17:37,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 10:18:02] 2025-11-22 15:17:37,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 10:18:02] 2025-11-22 15:17:45,956 | INFO     | [monitor] cgroup control has ended
[2025-11-22 10:18:02] 2025-11-22 15:17:46,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485718935360)>', '<ExcThread(monitor, started 140485083522816)>']
[2025-11-22 10:18:02] 2025-11-22 15:17:47,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 10:18:02] 2025-11-22 15:17:47,050 | INFO     | [monitor] control thread has ended
[2025-11-22 10:18:02] 2025-11-22 15:17:51,401 | INFO     | all workflow threads have been joined
[2025-11-22 10:18:02] 2025-11-22 15:17:51,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 10:18:02] 2025-11-22 15:17:51,402 | INFO     | traces error code: 0
[2025-11-22 10:18:02] 2025-11-22 15:17:51,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 10:18:02] 2025-11-22 15:17:57,949 [wrapper] ==== pilot stdout END ====
[2025-11-22 10:18:02] 2025-11-22 15:17:58,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 10:18:02] 2025-11-22 15:17:58,097 [wrapper] pilotpid: 1779664
[2025-11-22 10:18:02] 2025-11-22 15:17:58,161 [wrapper] Pilot exit status: 0
[2025-11-22 10:18:02] 2025-11-22 15:17:58,486 [wrapper] pandaids: 6893877153
[2025-11-22 10:18:02] 2025-11-22 15:17:59,192 [wrapper] cleanup supervisor_pilot  565482 1779665
[2025-11-22 10:18:02] 2025-11-22 15:17:59,229 [wrapper] Test setup, not cleaning
[2025-11-22 10:18:02] 2025-11-22 15:17:59,316 [wrapper] apfmon messages muted
[2025-11-22 10:18:02] 2025-11-22 15:17:59,380 [wrapper] ==== wrapper stdout END ====
[2025-11-22 10:18:02] 2025-11-22 15:17:59,439 [wrapper] ==== wrapper stderr END ====
[2025-11-22 10:18:02]  *** Error codes and diagnostics ***
[2025-11-22 10:18:02]     "exeErrorCode": 0,
[2025-11-22 10:18:02]     "exeErrorDiag": "",
[2025-11-22 10:18:02]     "pilotErrorCode": 0,
[2025-11-22 10:18:02]     "pilotErrorDiag": "",
[2025-11-22 10:18:02]  *** Listing of results directory ***
[2025-11-22 10:18:02] total 1347012
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-22 10:18:02] -rwx------. 1 boincer umatlas     36292 Nov 20 13:19 runpilot2-wrapper.sh
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:19 queuedata.json
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 10:18:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:12 run_atlas
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:12 job.xml
[2025-11-22 10:18:02] -rw-r--r--. 2 boincer umatlas 411047783 Nov 21 00:12 EVNT.47493127._000791.pool.root.1
[2025-11-22 10:18:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:12 start_atlas.sh
[2025-11-22 10:18:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:12 shared
[2025-11-22 10:18:02] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 00:12 input.tar.gz
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:12 boinc_lockfile
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:12 pandaJob.out
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas        57 Nov 21 00:12 setup.sh.local
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas    989817 Nov 21 00:12 agis_schedconf.cvmfs.json
[2025-11-22 10:18:02] drwx------. 5 boincer umatlas      4096 Nov 21 00:12 pilot3
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas       533 Nov 22 09:21 boinc_task_state.xml
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas 927751368 Nov 22 10:07 HITS.47523449._007904.pool.root.1
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas      6660 Nov 22 10:10 init_data.xml
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas      1071 Nov 22 10:14 memory_monitor_summary.json
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas   1526164 Nov 22 10:15 agis_ddmendpoints.agis.ALL.json
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas   2847377 Nov 22 10:15 log.47523449._007904.job.log.tgz.1
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas      8670 Nov 22 10:16 heartbeat.json
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas        96 Nov 22 10:17 pilot_heartbeat.json
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas      4823 Nov 22 10:17 pilotlog.txt
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 10:17 boinc_mmap_file
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas        30 Nov 22 10:17 wrapper_checkpoint.txt
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas  15462323 Nov 22 10:17 log.47523449._007904.job.log.1
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas       353 Nov 22 10:18 output.list
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas       620 Nov 22 10:18 runtime_log
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas  18329600 Nov 22 10:18 result.tar.gz
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas      9344 Nov 22 10:18 runtime_log.err
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas       668 Nov 22 10:18 f5BNDmYQOg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9wGKDmariWjn.diag
[2025-11-22 10:18:02] -rw-r--r--. 1 boincer umatlas     21876 Nov 22 10:18 stderr.txt
[2025-11-22 10:18:02] HITS file was successfully produced:
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas 927751368 Nov 22 10:07 shared/HITS.pool.root.1
[2025-11-22 10:18:02]  *** Contents of shared directory: ***
[2025-11-22 10:18:02] total 1325924
[2025-11-22 10:18:02] -rw-r--r--. 2 boincer umatlas 411047783 Nov 21 00:12 ATLAS.root_0
[2025-11-22 10:18:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:12 start_atlas.sh
[2025-11-22 10:18:02] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 00:12 input.tar.gz
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas 927751368 Nov 22 10:07 HITS.pool.root.1
[2025-11-22 10:18:02] -rw-------. 1 boincer umatlas  18329600 Nov 22 10:18 result.tar.gz
10:18:04 (1775917): run_atlas exited; CPU time 301671.183010
10:18:04 (1775917): called boinc_finish(0)

</stderr_txt>
]]>

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