Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:45 (2874365): wrapper (7.7.26015): starting
00:01:45 (2874365): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:01:45] Arguments: --nthreads 9
[2025-11-21 00:01:45] Threads: 9
[2025-11-21 00:01:45] Checking for CVMFS
[2025-11-21 00:01:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:01:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:01:47] 2.13.3.0 290515 25161 349932 153108 3 257 37804159 40960000 11410 16776704 0 120995632 99.745 79348548 38497 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 00:01:47] CVMFS is ok
[2025-11-21 00:01:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:01:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:01:47] Further information can be found at the LHC@home message board.
[2025-11-21 00:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:01:47] Checking for apptainer binary...
[2025-11-21 00:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:01:47] Running /usr/bin/apptainer --version
[2025-11-21 00:01:47] apptainer version 1.4.4-1.el9
[2025-11-21 00:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:01:48] c6-5-37-4.aglt2.org
[2025-11-21 00:01:48] apptainer works
[2025-11-21 00:01:48] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:01:48] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:01:48] Starting ATLAS job with PandaID=6893877122
[2025-11-21 00:01:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:24:24]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:24:24] 2025-11-21 17:23:51,256 | INFO     | mean y: 2990042.7785419533
[2025-11-21 12:24:24] 2025-11-21 17:23:51,257 | INFO     | intersect: -21545794833.774193
[2025-11-21 12:24:24] 2025-11-21 17:23:51,258 | INFO     | chi2: 9.279409333396906
[2025-11-21 12:24:24] 2025-11-21 17:23:51,259 | INFO     | sum of square deviations: 116700230112.7924
[2025-11-21 12:24:24] 2025-11-21 17:23:51,265 | INFO     | sum of deviations: 1694278052925.1997
[2025-11-21 12:24:24] 2025-11-21 17:23:51,265 | INFO     | mean x: 1763723509.7285318
[2025-11-21 12:24:24] 2025-11-21 17:23:51,266 | INFO     | mean y: 3004939.9806094184
[2025-11-21 12:24:24] 2025-11-21 17:23:51,266 | INFO     | intersect: -25603097387.950386
[2025-11-21 12:24:24] 2025-11-21 17:23:51,267 | INFO     | chi2: 6.395476934892251
[2025-11-21 12:24:24] 2025-11-21 17:23:51,267 | INFO     | current chi2=6.395476934892251 (change=31.0788358923373 %)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,268 | INFO     | sum of square deviations: 114292500482.1035
[2025-11-21 12:24:24] 2025-11-21 17:23:51,274 | INFO     | sum of deviations: 1714414937926.327
[2025-11-21 12:24:24] 2025-11-21 17:23:51,275 | INFO     | mean x: 1763723357.232915
[2025-11-21 12:24:24] 2025-11-21 17:23:51,275 | INFO     | mean y: 3006205.6387726637
[2025-11-21 12:24:24] 2025-11-21 17:23:51,275 | INFO     | intersect: -26453267454.094093
[2025-11-21 12:24:24] 2025-11-21 17:23:51,276 | INFO     | chi2: 6.229559703965874
[2025-11-21 12:24:24] 2025-11-21 17:23:51,276 | INFO     | current chi2=6.229559703965874 (change=2.5942901931390097 %)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,276 | INFO     | right removable region: 716
[2025-11-21 12:24:24] 2025-11-21 17:23:51,277 | INFO     | sum of square deviations: 116699689042.7924
[2025-11-21 12:24:24] 2025-11-21 17:23:51,291 | INFO     | sum of deviations: 1153902614337.3784
[2025-11-21 12:24:24] 2025-11-21 17:23:51,291 | INFO     | mean x: 1763723814.7285318
[2025-11-21 12:24:24] 2025-11-21 17:23:51,291 | INFO     | mean y: 3008885.7825484765
[2025-11-21 12:24:24] 2025-11-21 17:23:51,291 | INFO     | intersect: -17436330820.067703
[2025-11-21 12:24:24] 2025-11-21 17:23:51,292 | INFO     | chi2: 5.096797317965822
[2025-11-21 12:24:24] 2025-11-21 17:23:51,292 | INFO     | current chi2=5.096797317965822 (change=45.074119107750995 %)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,293 | INFO     | sum of square deviations: 114291593897.16533
[2025-11-21 12:24:24] 2025-11-21 17:23:51,300 | INFO     | sum of deviations: 960974407896.2705
[2025-11-21 12:24:24] 2025-11-21 17:23:51,300 | INFO     | mean x: 1763723967.2357044
[2025-11-21 12:24:24] 2025-11-21 17:23:51,300 | INFO     | mean y: 3021088.0753138075
[2025-11-21 12:24:24] 2025-11-21 17:23:51,300 | INFO     | intersect: -14826534938.869108
[2025-11-21 12:24:24] 2025-11-21 17:23:51,301 | INFO     | chi2: 3.3494064014204414
[2025-11-21 12:24:24] 2025-11-21 17:23:51,301 | INFO     | current chi2=3.3494064014204414 (change=34.28409661074732 %)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,302 | INFO     | sum of square deviations: 111916979917.4101
[2025-11-21 12:24:24] 2025-11-21 17:23:51,312 | INFO     | sum of deviations: 895270703071.3365
[2025-11-21 12:24:24] 2025-11-21 17:23:51,312 | INFO     | mean x: 1763724119.738764
[2025-11-21 12:24:24] 2025-11-21 17:23:51,312 | INFO     | mean y: 3025306.2921348317
[2025-11-21 12:24:24] 2025-11-21 17:23:51,312 | INFO     | intersect: -14105741154.951183
[2025-11-21 12:24:24] 2025-11-21 17:23:51,313 | INFO     | chi2: 3.2498536450540434
[2025-11-21 12:24:24] 2025-11-21 17:23:51,313 | INFO     | current chi2=3.2498536450540434 (change=2.972250734463843 %)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,313 | INFO     | left removable region: 30
[2025-11-21 12:24:24] 2025-11-21 17:23:51,314 | INFO     | sum of square deviations: 100098886179.33096
[2025-11-21 12:24:24] 2025-11-21 17:23:51,323 | INFO     | sum of deviations: 1022777107005.444
[2025-11-21 12:24:24] 2025-11-21 17:23:51,323 | INFO     | mean x: 1763724241.7419825
[2025-11-21 12:24:24] 2025-11-21 17:23:51,323 | INFO     | mean y: 3050909.2623906704
[2025-11-21 12:24:24] 2025-11-21 17:23:51,324 | INFO     | intersect: -18018096441.8928
[2025-11-21 12:24:24] 2025-11-21 17:23:51,324 | INFO     | chi2: 0.06099419170517702
[2025-11-21 12:24:24] 2025-11-21 17:23:51,325 | INFO     | current memory leak: 10.22 B/s (using 686 data points, chi2=0.06)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,326 | INFO     | could have reported an average CPU frequency of 3047 MHz (28 samples)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | ..............................
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . Timing measurements:
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . get job = 0 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . initial setup = 4 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . payload setup = 46 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . stage-in = 0 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . payload execution = 44334 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,327 | INFO     | . stage-out = 3 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,328 | INFO     | . log creation = 0 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,328 | INFO     | ..............................
[2025-11-21 12:24:24] 2025-11-21 17:23:51,329 | INFO     | monitor loop #3047: job 0:6893877122 is in state 'finished'
[2025-11-21 12:24:24] 2025-11-21 17:23:51,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,390 | INFO     | 
[2025-11-21 12:24:24] 2025-11-21 17:23:51,390 | INFO     | job summary report
[2025-11-21 12:24:24] 2025-11-21 17:23:51,390 | INFO     | --------------------------------------------------
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | PanDA job id: 6893877122
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | task id: 47523449
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | errors: (none)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | pilot state: finished 
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | transexitcode: 0
[2025-11-21 12:24:24] 2025-11-21 17:23:51,391 | INFO     | exeerrorcode: 0
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | exeerrordiag: 
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | exitcode: 0
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | exitmsg: OK
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | cpuconsumptiontime: 224285 s
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | nevents: 1000
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | neventsw: 0
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | pid: 2926926
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | pgrp: 2926926
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | corecount: 9
[2025-11-21 12:24:24] 2025-11-21 17:23:51,392 | INFO     | event service: False
[2025-11-21 12:24:24] 2025-11-21 17:23:51,393 | INFO     | sizes: {0: 2298585, 1: 2298784, 12: 2298784, 23: 2298812, 31: 2299102, 34: 2299130, 44384: 2345148, 44389: 2354198, 44395: 2354388}
[2025-11-21 12:24:24] 2025-11-21 17:23:51,393 | INFO     | --------------------------------------------------
[2025-11-21 12:24:24] 2025-11-21 17:23:51,393 | INFO     | 
[2025-11-21 12:24:24] 2025-11-21 17:23:51,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-21 12:24:24] 2025-11-21 17:23:51,400 | INFO     | PID=2886574 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 12:24:24] 2025-11-21 17:23:51,401 | INFO     | .. there are 25 such processes running
[2025-11-21 12:24:24] 2025-11-21 17:23:51,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:24:24] 2025-11-21 17:23:51,409 | INFO     | job 6893877122 has completed (purged errors)
[2025-11-21 12:24:24] 2025-11-21 17:23:51,409 | INFO     | overall cleanup function is called
[2025-11-21 12:24:24] 2025-11-21 17:23:52,422 | INFO     | --- collectZombieJob: --- 10, [2926926]
[2025-11-21 12:24:24] 2025-11-21 17:23:52,423 | INFO     | zombie collector waiting for pid 2926926
[2025-11-21 12:24:24] 2025-11-21 17:23:52,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:24:24] 2025-11-21 17:23:52,423 | INFO     | collected zombie processes
[2025-11-21 12:24:24] 2025-11-21 17:23:52,423 | INFO     | will attempt to kill all subprocesses of pid=2926926
[2025-11-21 12:24:24] 2025-11-21 17:23:52,698 | INFO     | process IDs to be killed: [2926926] (in reverse order)
[2025-11-21 12:24:24] 2025-11-21 17:23:52,799 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:24:24] 2025-11-21 17:23:52,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:24:24] 2025-11-21 17:23:52,813 | INFO     | did not find any defunct processes belonging to 2926926
[2025-11-21 12:24:24] 2025-11-21 17:23:52,825 | INFO     | did not find any defunct processes belonging to 2926926
[2025-11-21 12:24:24] 2025-11-21 17:23:52,826 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:24:24] 2025-11-21 17:23:52,826 | INFO     | ready for new job
[2025-11-21 12:24:24] 2025-11-21 17:23:52,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:24:24] 2025-11-21 17:23:52,830 | INFO     | ***************************************
[2025-11-21 12:24:24] 2025-11-21 17:23:52,830 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:24:24] 2025-11-21 17:23:52,830 | INFO     | ***************************************
[2025-11-21 12:24:24] 2025-11-21 17:23:52,830 | INFO     | 
[2025-11-21 12:24:24] 2025-11-21 17:23:52,833 | INFO     | architecture information:
[2025-11-21 12:24:24] 2025-11-21 17:23:52,834 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:24:24] 2025-11-21 17:23:52,850 | INFO     | cat /etc/os-release:
[2025-11-21 12:24:24] NAME="CentOS Linux"
[2025-11-21 12:24:24] VERSION="7 (Core)"
[2025-11-21 12:24:24] ID="centos"
[2025-11-21 12:24:24] ID_LIKE="rhel fedora"
[2025-11-21 12:24:24] VERSION_ID="7"
[2025-11-21 12:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:24:24] ANSI_COLOR="0;31"
[2025-11-21 12:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:24:24] HOME_URL="https://www.centos.org/"
[2025-11-21 12:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:24:24] 
[2025-11-21 12:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:24:24] 
[2025-11-21 12:24:24] 2025-11-21 17:23:52,851 | INFO     | ***************************************
[2025-11-21 12:24:24] 2025-11-21 17:23:53,354 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-21 12:24:24] 2025-11-21 17:23:53,371 | INFO     | sufficient remaining disk space (68112351232 B)
[2025-11-21 12:24:24] 2025-11-21 17:23:53,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:24:24] 2025-11-21 17:23:53,371 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:24:24] 2025-11-21 17:23:53,371 | INFO     | update_server=False
[2025-11-21 12:24:24] 2025-11-21 17:23:53,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:24:24] 2025-11-21 17:23:53,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:24:24] 2025-11-21 17:23:53,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:24:24] 2025-11-21 17:23:53,566 | INFO     | all data control threads have been joined
[2025-11-21 12:24:24] 2025-11-21 17:23:53,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 12:24:24] 2025-11-21 17:23:53,833 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 12:24:24] 2025-11-21 17:23:53,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:24:24] 2025-11-21 17:23:53,833 | INFO     | will abort loop
[2025-11-21 12:24:24] 2025-11-21 17:23:54,376 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,377 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,571 | INFO     | [data] control thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,581 | INFO     | all payload control threads have been joined
[2025-11-21 12:24:24] 2025-11-21 17:23:54,627 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,765 | INFO     | [job] validate thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,838 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,874 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:54,880 | INFO     | all job control threads have been joined
[2025-11-21 12:24:24] 2025-11-21 17:23:54,904 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,334 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,375 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,418 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,472 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,587 | INFO     | [payload] control thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,886 | INFO     | [job] control thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:23:55,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:24:24] 2025-11-21 17:24:00,003 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:24:24] 2025-11-21 17:24:05,286 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:24:24] 2025-11-21 17:24:06,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725886093120)>', '<ExcThread(monitor, started 139725377611520)>']
[2025-11-21 12:24:24] 2025-11-21 17:24:11,134 | INFO     | all workflow threads have been joined
[2025-11-21 12:24:24] 2025-11-21 17:24:11,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:24:24] 2025-11-21 17:24:11,135 | INFO     | traces error code: 0
[2025-11-21 12:24:24] 2025-11-21 17:24:11,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:24:24] 2025-11-21 17:24:23,832 | INFO     | PID=2886574 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:24:24] 2025-11-21 17:24:23,833 | INFO     | .. there are 25 such processes running
[2025-11-21 12:24:24] 2025-11-21 17:24:23,833 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:24:24] 2025-11-21 17:24:23,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:24:24] 2025-11-21 17:24:23,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:24:24] 2025-11-21 17:24:23,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:24:24] 2025-11-21 17:24:23,834 | INFO     | [monitor] control thread has ended
[2025-11-21 12:24:24] 2025-11-21 17:24:24,018 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:24:24] 2025-11-21 17:24:24,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:24:24] 2025-11-21 17:24:24,024 [wrapper] pilotpid: 2886574
[2025-11-21 12:24:24] 2025-11-21 17:24:24,027 [wrapper] Pilot exit status: 0
[2025-11-21 12:24:24] 2025-11-21 17:24:24,041 [wrapper] pandaids: 6893877122
[2025-11-21 12:24:24] 2025-11-21 17:24:24,116 [wrapper] cleanup supervisor_pilot  799903 2886576
[2025-11-21 12:24:24] 2025-11-21 17:24:24,119 [wrapper] Test setup, not cleaning
[2025-11-21 12:24:24] 2025-11-21 17:24:24,122 [wrapper] apfmon messages muted
[2025-11-21 12:24:24] 2025-11-21 17:24:24,124 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:24:24] 2025-11-21 17:24:24,127 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:24:24]  *** Error codes and diagnostics ***
[2025-11-21 12:24:24]     "exeErrorCode": 0,
[2025-11-21 12:24:24]     "exeErrorDiag": "",
[2025-11-21 12:24:24]     "pilotErrorCode": 0,
[2025-11-21 12:24:24]     "pilotErrorDiag": "",
[2025-11-21 12:24:24]  *** Listing of results directory ***
[2025-11-21 12:24:24] total 1317560
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-21 12:24:24] -rwx------. 1 boincer umatlas     36292 Nov 20 13:15 runpilot2-wrapper.sh
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:15 queuedata.json
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:24:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:01 run_atlas
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:01 job.xml
[2025-11-21 12:24:24] -rw-r--r--. 2 boincer umatlas 409482989 Nov 21 00:01 EVNT.47493127._000789.pool.root.1
[2025-11-21 12:24:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-21 12:24:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:01 shared
[2025-11-21 12:24:24] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 00:01 input.tar.gz
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:01 boinc_lockfile
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:01 pandaJob.out
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas        57 Nov 21 00:01 setup.sh.local
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas    989817 Nov 21 00:02 agis_schedconf.cvmfs.json
[2025-11-21 12:24:24] drwx------. 5 boincer umatlas      4096 Nov 21 00:02 pilot3
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas       533 Nov 21 12:15 boinc_task_state.xml
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas      6843 Nov 21 12:19 init_data.xml
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas 919385543 Nov 21 12:23 HITS.47523449._007889.pool.root.1
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas      1064 Nov 21 12:23 memory_monitor_summary.json
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas   1526164 Nov 21 12:23 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas   2095820 Nov 21 12:23 log.47523449._007889.job.log.tgz.1
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas      8627 Nov 21 12:23 heartbeat.json
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 12:24 boinc_mmap_file
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas        29 Nov 21 12:24 wrapper_checkpoint.txt
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas       823 Nov 21 12:24 pilotlog.txt
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas        95 Nov 21 12:24 pilot_heartbeat.json
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas   6101300 Nov 21 12:24 log.47523449._007889.job.log.1
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas       353 Nov 21 12:24 output.list
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas       620 Nov 21 12:24 runtime_log
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas   8212480 Nov 21 12:24 result.tar.gz
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas       661 Nov 21 12:24 vthNDmZMOg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOOIKDmPe2SQo.diag
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas      9348 Nov 21 12:24 runtime_log.err
[2025-11-21 12:24:24] -rw-r--r--. 1 boincer umatlas     21382 Nov 21 12:24 stderr.txt
[2025-11-21 12:24:24] HITS file was successfully produced:
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas 919385543 Nov 21 12:23 shared/HITS.pool.root.1
[2025-11-21 12:24:24]  *** Contents of shared directory: ***
[2025-11-21 12:24:24] total 1306352
[2025-11-21 12:24:24] -rw-r--r--. 2 boincer umatlas 409482989 Nov 21 00:01 ATLAS.root_0
[2025-11-21 12:24:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-21 12:24:24] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 00:01 input.tar.gz
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas 919385543 Nov 21 12:23 HITS.pool.root.1
[2025-11-21 12:24:24] -rw-------. 1 boincer umatlas   8212480 Nov 21 12:24 result.tar.gz
12:24:25 (2874365): run_atlas exited; CPU time 224906.065909
12:24:25 (2874365): called boinc_finish(0)

</stderr_txt>
]]>

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