Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:01 (3385087): wrapper (7.7.26015): starting
00:13:01 (3385087): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:13:01] Arguments: --nthreads 8
[2025-11-21 00:13:01] Threads: 8
[2025-11-21 00:13:01] Checking for CVMFS
[2025-11-21 00:13:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:13:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:13:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:13:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:13:03] 2.13.2.0 5664 26139 190668 153109 2 57 36458642 39288832 6797 16776704 0 16930474 99.613 12627974 27629 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:13:03] CVMFS is ok
[2025-11-21 00:13:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:13:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:13:03] Further information can be found at the LHC@home message board.
[2025-11-21 00:13:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:13:03] Checking for apptainer binary...
[2025-11-21 00:13:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:13:03] Running /usr/bin/apptainer --version
[2025-11-21 00:13:03] apptainer version 1.4.4-1.el9
[2025-11-21 00:13:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:13:04] c-210-30.aglt2.org
[2025-11-21 00:13:04] apptainer works
[2025-11-21 00:13:04] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:13:04] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:13:04] Starting ATLAS job with PandaID=6893877089
[2025-11-21 00:13:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 16:42:59]  *** The last 200 lines of the pilot log: ***
[2025-11-21 16:42:59] 2025-11-21 21:41:59,355 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 16:42:59] 2025-11-21 21:41:59,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 16:42:59] 2025-11-21 21:41:59,398 | INFO     | fitting pss+swap vs Time
[2025-11-21 16:42:59] 2025-11-21 21:41:59,400 | INFO     | sum of square deviations: 282154912665.82245
[2025-11-21 16:42:59] 2025-11-21 21:41:59,449 | INFO     | sum of deviations: 2633231433359.579
[2025-11-21 16:42:59] 2025-11-21 21:41:59,450 | INFO     | mean x: 1763731711.116615
[2025-11-21 16:42:59] 2025-11-21 21:41:59,450 | INFO     | mean y: 2897059.5789473685
[2025-11-21 16:42:59] 2025-11-21 21:41:59,450 | INFO     | intersect: -16457258596.920155
[2025-11-21 16:42:59] 2025-11-21 21:41:59,456 | INFO     | chi2: 12.209830173154016
[2025-11-21 16:42:59] 2025-11-21 21:41:59,457 | INFO     | sum of square deviations: 277810339184.79987
[2025-11-21 16:42:59] 2025-11-21 21:41:59,506 | INFO     | sum of deviations: 2971987238837.7827
[2025-11-21 16:42:59] 2025-11-21 21:41:59,511 | INFO     | mean x: 1763731558.6213694
[2025-11-21 16:42:59] 2025-11-21 21:41:59,511 | INFO     | mean y: 2908950.010373444
[2025-11-21 16:42:59] 2025-11-21 21:41:59,511 | INFO     | intersect: -18865314962.532124
[2025-11-21 16:42:59] 2025-11-21 21:41:59,512 | INFO     | chi2: 8.773312062152955
[2025-11-21 16:42:59] 2025-11-21 21:41:59,512 | INFO     | current chi2=8.773312062152955 (change=28.145502945298922 %)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,514 | INFO     | sum of square deviations: 273510662678.4799
[2025-11-21 16:42:59] 2025-11-21 21:41:59,567 | INFO     | sum of deviations: 3270675625555.399
[2025-11-21 16:42:59] 2025-11-21 21:41:59,568 | INFO     | mean x: 1763731406.1272159
[2025-11-21 16:42:59] 2025-11-21 21:41:59,568 | INFO     | mean y: 2919534.28362878
[2025-11-21 16:42:59] 2025-11-21 21:41:59,568 | INFO     | intersect: -21088007099.271393
[2025-11-21 16:42:59] 2025-11-21 21:41:59,569 | INFO     | chi2: 5.867231408311914
[2025-11-21 16:42:59] 2025-11-21 21:41:59,569 | INFO     | current chi2=5.867231408311914 (change=33.12409992091281 %)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,575 | INFO     | sum of square deviations: 269255591659.5934
[2025-11-21 16:42:59] 2025-11-21 21:41:59,624 | INFO     | sum of deviations: 3301671491436.3945
[2025-11-21 16:42:59] 2025-11-21 21:41:59,624 | INFO     | mean x: 1763731253.6331236
[2025-11-21 16:42:59] 2025-11-21 21:41:59,624 | INFO     | mean y: 2920640.3039832283
[2025-11-21 16:42:59] 2025-11-21 21:41:59,625 | INFO     | intersect: -21624341259.006615
[2025-11-21 16:42:59] 2025-11-21 21:41:59,626 | INFO     | chi2: 5.675484485201552
[2025-11-21 16:42:59] 2025-11-21 21:41:59,626 | INFO     | current chi2=5.675484485201552 (change=3.2680988658248764 %)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,626 | INFO     | right removable region: 953
[2025-11-21 16:42:59] 2025-11-21 21:41:59,632 | INFO     | sum of square deviations: 277809738394.556
[2025-11-21 16:42:59] 2025-11-21 21:41:59,681 | INFO     | sum of deviations: 2271249772869.7246
[2025-11-21 16:42:59] 2025-11-21 21:41:59,681 | INFO     | mean x: 1763731863.6224067
[2025-11-21 16:42:59] 2025-11-21 21:41:59,681 | INFO     | mean y: 2909759.6887966804
[2025-11-21 16:42:59] 2025-11-21 21:41:59,681 | INFO     | intersect: -14416583299.86043
[2025-11-21 16:42:59] 2025-11-21 21:41:59,687 | INFO     | chi2: 8.698491218580985
[2025-11-21 16:42:59] 2025-11-21 21:41:59,687 | INFO     | current chi2=8.698491218580985 (change=28.75829479015587 %)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,688 | INFO     | sum of square deviations: 273509402173.2241
[2025-11-21 16:42:59] 2025-11-21 21:41:59,737 | INFO     | sum of deviations: 2008085448898.3762
[2025-11-21 16:42:59] 2025-11-21 21:41:59,737 | INFO     | mean x: 1763732016.1282587
[2025-11-21 16:42:59] 2025-11-21 21:41:59,737 | INFO     | mean y: 2919087.639207508
[2025-11-21 16:42:59] 2025-11-21 21:41:59,737 | INFO     | intersect: -12946268652.167416
[2025-11-21 16:42:59] 2025-11-21 21:41:59,743 | INFO     | chi2: 6.9771396582351155
[2025-11-21 16:42:59] 2025-11-21 21:41:59,743 | INFO     | current chi2=6.9771396582351155 (change=19.78908200388664 %)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,743 | INFO     | left removable region: 20
[2025-11-21 16:42:59] 2025-11-21 21:41:59,744 | INFO     | sum of square deviations: 251864247666.0401
[2025-11-21 16:42:59] 2025-11-21 21:41:59,791 | INFO     | sum of deviations: 2517136939611.6177
[2025-11-21 16:42:59] 2025-11-21 21:41:59,791 | INFO     | mean x: 1763731833.142551
[2025-11-21 16:42:59] 2025-11-21 21:41:59,792 | INFO     | mean y: 2948785.664523044
[2025-11-21 16:42:59] 2025-11-21 21:41:59,792 | INFO     | intersect: -17623826709.119736
[2025-11-21 16:42:59] 2025-11-21 21:41:59,793 | INFO     | chi2: 0.13176267891126167
[2025-11-21 16:42:59] 2025-11-21 21:41:59,793 | INFO     | current memory leak: 9.99 B/s (using 933 data points, chi2=0.13)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,794 | INFO     | could have reported an average CPU frequency of 2599 MHz (36 samples)
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | ..............................
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . Timing measurements:
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . get job = 0 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . initial setup = 5 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . payload setup = 42 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . stage-in = 0 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . payload execution = 59130 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . stage-out = 7 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | . log creation = 1 s
[2025-11-21 16:42:59] 2025-11-21 21:41:59,799 | INFO     | ..............................
[2025-11-21 16:42:59] 2025-11-21 21:42:00,011 | INFO     | 
[2025-11-21 16:42:59] 2025-11-21 21:42:00,011 | INFO     | job summary report
[2025-11-21 16:42:59] 2025-11-21 21:42:00,011 | INFO     | --------------------------------------------------
[2025-11-21 16:42:59] 2025-11-21 21:42:00,011 | INFO     | PanDA job id: 6893877089
[2025-11-21 16:42:59] 2025-11-21 21:42:00,011 | INFO     | task id: 47523449
[2025-11-21 16:42:59] 2025-11-21 21:42:00,011 | INFO     | errors: (none)
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | pilot state: finished 
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | transexitcode: 0
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | exeerrorcode: 0
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | exeerrordiag: 
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | exitcode: 0
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | exitmsg: OK
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | cpuconsumptiontime: 295742 s
[2025-11-21 16:42:59] 2025-11-21 21:42:00,012 | INFO     | nevents: 1000
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | neventsw: 0
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | pid: 3397770
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | pgrp: 3397770
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | corecount: 8
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | event service: False
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | sizes: {0: 2298584, 1: 2298783, 12: 2298783, 23: 2298811, 31: 2299101, 34: 2299129, 59177: 2352040, 59178: 2352039, 59187: 2361089, 59189: 2361145, 59207: 2361391}
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | --------------------------------------------------
[2025-11-21 16:42:59] 2025-11-21 21:42:00,013 | INFO     | 
[2025-11-21 16:42:59] 2025-11-21 21:42:00,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-21 16:42:59] 2025-11-21 21:42:00,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | job 6893877089 has completed (purged errors)
[2025-11-21 16:42:59] 2025-11-21 21:42:00,073 | INFO     | overall cleanup function is called
[2025-11-21 16:42:59] 2025-11-21 21:42:01,090 | INFO     | --- collectZombieJob: --- 10, [3397770]
[2025-11-21 16:42:59] 2025-11-21 21:42:01,091 | INFO     | zombie collector waiting for pid 3397770
[2025-11-21 16:42:59] 2025-11-21 21:42:01,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 16:42:59] 2025-11-21 21:42:01,092 | INFO     | collected zombie processes
[2025-11-21 16:42:59] 2025-11-21 21:42:01,092 | INFO     | will attempt to kill all subprocesses of pid=3397770
[2025-11-21 16:42:59] 2025-11-21 21:42:02,008 | INFO     | process IDs to be killed: [3397770] (in reverse order)
[2025-11-21 16:42:59] 2025-11-21 21:42:02,227 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 16:42:59] 2025-11-21 21:42:02,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 16:42:59] 2025-11-21 21:42:02,261 | INFO     | did not find any defunct processes belonging to 3397770
[2025-11-21 16:42:59] 2025-11-21 21:42:02,283 | INFO     | did not find any defunct processes belonging to 3397770
[2025-11-21 16:42:59] 2025-11-21 21:42:02,289 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 16:42:59] 2025-11-21 21:42:02,290 | INFO     | ready for new job
[2025-11-21 16:42:59] 2025-11-21 21:42:02,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 16:42:59] 2025-11-21 21:42:02,297 | INFO     | ***************************************
[2025-11-21 16:42:59] 2025-11-21 21:42:02,297 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 16:42:59] 2025-11-21 21:42:02,297 | INFO     | ***************************************
[2025-11-21 16:42:59] 2025-11-21 21:42:02,297 | INFO     | 
[2025-11-21 16:42:59] 2025-11-21 21:42:02,299 | INFO     | architecture information:
[2025-11-21 16:42:59] 2025-11-21 21:42:02,304 | INFO     | executing command: cat /etc/os-release
[2025-11-21 16:42:59] 2025-11-21 21:42:02,373 | INFO     | cat /etc/os-release:
[2025-11-21 16:42:59] NAME="CentOS Linux"
[2025-11-21 16:42:59] VERSION="7 (Core)"
[2025-11-21 16:42:59] ID="centos"
[2025-11-21 16:42:59] ID_LIKE="rhel fedora"
[2025-11-21 16:42:59] VERSION_ID="7"
[2025-11-21 16:42:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 16:42:59] ANSI_COLOR="0;31"
[2025-11-21 16:42:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 16:42:59] HOME_URL="https://www.centos.org/"
[2025-11-21 16:42:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 16:42:59] 
[2025-11-21 16:42:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 16:42:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 16:42:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 16:42:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 16:42:59] 
[2025-11-21 16:42:59] 2025-11-21 21:42:02,385 | INFO     | ***************************************
[2025-11-21 16:42:59] 2025-11-21 21:42:02,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-21 16:42:59] 2025-11-21 21:42:02,957 | INFO     | sufficient remaining disk space (48021635072 B)
[2025-11-21 16:42:59] 2025-11-21 21:42:02,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 16:42:59] 2025-11-21 21:42:02,957 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 16:42:59] 2025-11-21 21:42:02,958 | INFO     | update_server=False
[2025-11-21 16:42:59] 2025-11-21 21:42:02,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 16:42:59] 2025-11-21 21:42:02,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 16:42:59] 2025-11-21 21:42:03,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 16:42:59] 2025-11-21 21:42:03,362 | INFO     | all job control threads have been joined
[2025-11-21 16:42:59] 2025-11-21 21:42:03,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 16:42:59] 2025-11-21 21:42:03,701 | INFO     | aborting loop
[2025-11-21 16:42:59] 2025-11-21 21:42:03,860 | INFO     | all payload control threads have been joined
[2025-11-21 16:42:59] 2025-11-21 21:42:03,962 | INFO     | all data control threads have been joined
[2025-11-21 16:42:59] 2025-11-21 21:42:03,970 | INFO     | [job] retrieve thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,183 | INFO     | [payload] validate_post thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,240 | INFO     | [job] validate thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,367 | INFO     | [job] control thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,458 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,706 | INFO     | [job] job monitor thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,866 | INFO     | [payload] control thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,911 | INFO     | [payload] failed_post thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:04,968 | INFO     | [data] control thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:05,007 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:05,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 16:42:59] 2025-11-21 21:42:05,133 | INFO     | [data] copytool_in thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:05,134 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:05,311 | INFO     | [data] copytool_out thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:06,044 | INFO     | [job] queue monitor thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:06,978 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 16:42:59] 2025-11-21 21:42:32,300 | INFO     | PID=3389184 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 16:42:59] 2025-11-21 21:42:32,300 | INFO     | .. there are 9 such processes running
[2025-11-21 16:42:59] 2025-11-21 21:42:32,302 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 16:42:59] 2025-11-21 21:42:32,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 16:42:59] 2025-11-21 21:42:32,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 16:42:59] 2025-11-21 21:42:52,519 | INFO     | [monitor] cgroup control has ended
[2025-11-21 16:42:59] 2025-11-21 21:42:53,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250794993472)>', '<ExcThread(monitor, started 140250428970752)>']
[2025-11-21 16:42:59] 2025-11-21 21:42:53,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 16:42:59] 2025-11-21 21:42:53,504 | INFO     | [monitor] control thread has ended
[2025-11-21 16:42:59] 2025-11-21 21:42:58,329 | INFO     | all workflow threads have been joined
[2025-11-21 16:42:59] 2025-11-21 21:42:58,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 16:42:59] 2025-11-21 21:42:58,331 | INFO     | traces error code: 0
[2025-11-21 16:42:59] 2025-11-21 21:42:58,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 16:42:59] 2025-11-21 21:42:58,609 [wrapper] ==== pilot stdout END ====
[2025-11-21 16:42:59] 2025-11-21 21:42:58,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 16:42:59] 2025-11-21 21:42:58,654 [wrapper] pilotpid: 3389184
[2025-11-21 16:42:59] 2025-11-21 21:42:58,664 [wrapper] Pilot exit status: 0
[2025-11-21 16:42:59] 2025-11-21 21:42:58,778 [wrapper] pandaids: 6893877089
[2025-11-21 16:42:59] 2025-11-21 21:42:58,981 [wrapper] cleanup supervisor_pilot  604554 3389185
[2025-11-21 16:42:59] 2025-11-21 21:42:58,984 [wrapper] Test setup, not cleaning
[2025-11-21 16:42:59] 2025-11-21 21:42:58,987 [wrapper] apfmon messages muted
[2025-11-21 16:42:59] 2025-11-21 21:42:58,990 [wrapper] ==== wrapper stdout END ====
[2025-11-21 16:42:59] 2025-11-21 21:42:58,994 [wrapper] ==== wrapper stderr END ====
[2025-11-21 16:42:59]  *** Error codes and diagnostics ***
[2025-11-21 16:42:59]     "exeErrorCode": 0,
[2025-11-21 16:42:59]     "exeErrorDiag": "",
[2025-11-21 16:42:59]     "pilotErrorCode": 0,
[2025-11-21 16:42:59]     "pilotErrorDiag": "",
[2025-11-21 16:42:59]  *** Listing of results directory ***
[2025-11-21 16:42:59] total 1323032
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 12:52 pilot3.tar.gz
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:01 queuedata.json
[2025-11-21 16:42:59] -rwx------. 1 boincer umatlas     36292 Nov 20 13:03 runpilot2-wrapper.sh
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 16:42:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:13 run_atlas
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:13 job.xml
[2025-11-21 16:42:59] -rw-r--r--. 2 boincer umatlas 411540998 Nov 21 00:13 EVNT.47493127._000786.pool.root.1
[2025-11-21 16:42:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:13 start_atlas.sh
[2025-11-21 16:42:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:13 shared
[2025-11-21 16:42:59] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 00:13 input.tar.gz
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:13 boinc_lockfile
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 00:13 pandaJob.out
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas        57 Nov 21 00:13 setup.sh.local
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas    989817 Nov 21 00:14 agis_schedconf.cvmfs.json
[2025-11-21 16:42:59] drwx------. 5 boincer umatlas      4096 Nov 21 00:14 pilot3
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas       533 Nov 21 16:26 boinc_task_state.xml
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas      6661 Nov 21 16:38 init_data.xml
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas 918690081 Nov 21 16:40 HITS.47523449._007856.pool.root.1
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas      1055 Nov 21 16:41 memory_monitor_summary.json
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas   1526164 Nov 21 16:41 agis_ddmendpoints.agis.ALL.json
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas   2170411 Nov 21 16:41 log.47523449._007856.job.log.tgz.1
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas      8620 Nov 21 16:41 heartbeat.json
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas        95 Nov 21 16:42 pilot_heartbeat.json
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 16:42 boinc_mmap_file
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas        29 Nov 21 16:42 wrapper_checkpoint.txt
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas      4823 Nov 21 16:42 pilotlog.txt
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas   8143945 Nov 21 16:42 log.47523449._007856.job.log.1
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas       353 Nov 21 16:42 output.list
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas       620 Nov 21 16:42 runtime_log
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas  10332160 Nov 21 16:42 result.tar.gz
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 16:42 runtime_log.err
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas       660 Nov 21 16:42 Nx9KDmdBOg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlwGKDmeVWQwn.diag
[2025-11-21 16:42:59] -rw-r--r--. 1 boincer umatlas     21171 Nov 21 16:42 stderr.txt
[2025-11-21 16:42:59] HITS file was successfully produced:
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas 918690081 Nov 21 16:40 shared/HITS.pool.root.1
[2025-11-21 16:42:59]  *** Contents of shared directory: ***
[2025-11-21 16:42:59] total 1309752
[2025-11-21 16:42:59] -rw-r--r--. 2 boincer umatlas 411540998 Nov 21 00:13 ATLAS.root_0
[2025-11-21 16:42:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:13 start_atlas.sh
[2025-11-21 16:42:59] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 00:13 input.tar.gz
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas 918690081 Nov 21 16:40 HITS.pool.root.1
[2025-11-21 16:42:59] -rw-------. 1 boincer umatlas  10332160 Nov 21 16:42 result.tar.gz
16:43:01 (3385087): run_atlas exited; CPU time 296341.101696
16:43:01 (3385087): called boinc_finish(0)

</stderr_txt>
]]>

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