Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:59 (1740953): wrapper (7.7.26015): starting
00:00:59 (1740953): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:00:59] Arguments: --nthreads 9
[2025-11-21 00:00:59] Threads: 9
[2025-11-21 00:00:59] Checking for CVMFS
[2025-11-21 00:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:00:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:01:00] 2.13.3.0 12763 22356 228704 153108 2 288 38109578 40960001 18112 16776704 0 173629539 99.746 101135583 35324 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 00:01:00] CVMFS is ok
[2025-11-21 00:01:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:01:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:01:00] Further information can be found at the LHC@home message board.
[2025-11-21 00:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:01:00] Checking for apptainer binary...
[2025-11-21 00:01:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:01:00] Running /usr/bin/apptainer --version
[2025-11-21 00:01:00] apptainer version 1.4.4-1.el9
[2025-11-21 00:01:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:01:00] c7-2-17.aglt2.org
[2025-11-21 00:01:00] apptainer works
[2025-11-21 00:01:00] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:01:00] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:01:00] Starting ATLAS job with PandaID=6893850171
[2025-11-21 00:01:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 13:20:54]  *** The last 200 lines of the pilot log: ***
[2025-11-21 13:20:54] 2025-11-21 18:19:57,327 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 13:20:54] 2025-11-21 18:19:57,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 13:20:54] 2025-11-21 18:19:57,438 | INFO     | fitting pss+swap vs Time
[2025-11-21 13:20:54] 2025-11-21 18:19:57,439 | INFO     | sum of square deviations: 149426921124.23993
[2025-11-21 13:20:54] 2025-11-21 18:19:57,467 | INFO     | sum of deviations: 590999070239.4125
[2025-11-21 13:20:54] 2025-11-21 18:19:57,468 | INFO     | mean x: 1763725212.9005103
[2025-11-21 13:20:54] 2025-11-21 18:19:57,468 | INFO     | mean y: 3027966.723214286
[2025-11-21 13:20:54] 2025-11-21 18:19:57,468 | INFO     | intersect: -6972689348.066059
[2025-11-21 13:20:54] 2025-11-21 18:19:57,469 | INFO     | chi2: 12.3706712067165
[2025-11-21 13:20:54] 2025-11-21 18:19:57,469 | INFO     | sum of square deviations: 146586532974.36954
[2025-11-21 13:20:54] 2025-11-21 18:19:57,524 | INFO     | sum of deviations: 887782372644.5981
[2025-11-21 13:20:54] 2025-11-21 18:19:57,524 | INFO     | mean x: 1763725060.4094994
[2025-11-21 13:20:54] 2025-11-21 18:19:57,524 | INFO     | mean y: 3043895.838254172
[2025-11-21 13:20:54] 2025-11-21 18:19:57,524 | INFO     | intersect: -10678728754.428747
[2025-11-21 13:20:54] 2025-11-21 18:19:57,525 | INFO     | chi2: 8.62797629243746
[2025-11-21 13:20:54] 2025-11-21 18:19:57,525 | INFO     | current chi2=8.62797629243746 (change=30.254582404930392 %)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,526 | INFO     | sum of square deviations: 143782378061.87228
[2025-11-21 13:20:54] 2025-11-21 18:19:57,577 | INFO     | sum of deviations: 1198766987218.3374
[2025-11-21 13:20:54] 2025-11-21 18:19:57,584 | INFO     | mean x: 1763724907.9186046
[2025-11-21 13:20:54] 2025-11-21 18:19:57,584 | INFO     | mean y: 3060805.497416021
[2025-11-21 13:20:54] 2025-11-21 18:19:57,584 | INFO     | intersect: -14701767579.227894
[2025-11-21 13:20:54] 2025-11-21 18:19:57,585 | INFO     | chi2: 4.70765099038574
[2025-11-21 13:20:54] 2025-11-21 18:19:57,585 | INFO     | current chi2=4.70765099038574 (change=45.43736757236965 %)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,586 | INFO     | sum of square deviations: 141014223824.2447
[2025-11-21 13:20:54] 2025-11-21 18:19:57,660 | INFO     | sum of deviations: 1385925073419.9014
[2025-11-21 13:20:54] 2025-11-21 18:19:57,660 | INFO     | mean x: 1763724755.4278283
[2025-11-21 13:20:54] 2025-11-21 18:19:57,660 | INFO     | mean y: 3071091.8270481145
[2025-11-21 13:20:54] 2025-11-21 18:19:57,660 | INFO     | intersect: -17331282102.255096
[2025-11-21 13:20:54] 2025-11-21 18:19:57,661 | INFO     | chi2: 2.6583458640167668
[2025-11-21 13:20:54] 2025-11-21 18:19:57,661 | INFO     | current chi2=2.6583458640167668 (change=43.53137330176329 %)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,662 | INFO     | sum of square deviations: 138281509223.04083
[2025-11-21 13:20:54] 2025-11-21 18:19:57,691 | INFO     | sum of deviations: 1365863268589.775
[2025-11-21 13:20:54] 2025-11-21 18:19:57,692 | INFO     | mean x: 1763724602.9280105
[2025-11-21 13:20:54] 2025-11-21 18:19:57,692 | INFO     | mean y: 3069970.977748691
[2025-11-21 13:20:54] 2025-11-21 18:19:57,692 | INFO     | intersect: -17417962418.550583
[2025-11-21 13:20:54] 2025-11-21 18:19:57,692 | INFO     | chi2: 2.65480172699442
[2025-11-21 13:20:54] 2025-11-21 18:19:57,693 | INFO     | current chi2=2.65480172699442 (change=0.13332114042494728 %)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,693 | INFO     | right removable region: 763
[2025-11-21 13:20:54] 2025-11-21 18:19:57,693 | INFO     | sum of square deviations: 146585910776.18735
[2025-11-21 13:20:54] 2025-11-21 18:19:57,716 | INFO     | sum of deviations: 356871935060.7185
[2025-11-21 13:20:54] 2025-11-21 18:19:57,720 | INFO     | mean x: 1763725365.4082158
[2025-11-21 13:20:54] 2025-11-21 18:19:57,720 | INFO     | mean y: 3040516.8562259306
[2025-11-21 13:20:54] 2025-11-21 18:19:57,720 | INFO     | intersect: -4290851581.8866754
[2025-11-21 13:20:54] 2025-11-21 18:19:57,721 | INFO     | chi2: 10.078487865815893
[2025-11-21 13:20:54] 2025-11-21 18:19:57,721 | INFO     | current chi2=10.078487865815893 (change=18.52917519670311 %)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,721 | INFO     | left removable region: 10
[2025-11-21 13:20:54] 2025-11-21 18:19:57,722 | INFO     | sum of square deviations: 132393821541.25357
[2025-11-21 13:20:54] 2025-11-21 18:19:57,746 | INFO     | sum of deviations: 1060933216641.458
[2025-11-21 13:20:54] 2025-11-21 18:19:57,746 | INFO     | mean x: 1763724877.436919
[2025-11-21 13:20:54] 2025-11-21 18:19:57,746 | INFO     | mean y: 3086720.90438247
[2025-11-21 13:20:54] 2025-11-21 18:19:57,746 | INFO     | intersect: -14130460341.234407
[2025-11-21 13:20:54] 2025-11-21 18:19:57,747 | INFO     | chi2: 0.1804403995481862
[2025-11-21 13:20:54] 2025-11-21 18:19:57,747 | INFO     | current memory leak: 8.01 B/s (using 753 data points, chi2=0.18)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | could have reported an average CPU frequency of 3221 MHz (30 samples)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | ..............................
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | . Timing measurements:
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | . get job = 0 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | . initial setup = 2 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | . payload setup = 14 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | . stage-in = 0 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,752 | INFO     | . payload execution = 47835 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,753 | INFO     | . stage-out = 11 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,753 | INFO     | . log creation = 2 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,753 | INFO     | ..............................
[2025-11-21 13:20:54] 2025-11-21 18:19:57,976 | INFO     | 
[2025-11-21 13:20:54] 2025-11-21 18:19:57,976 | INFO     | job summary report
[2025-11-21 13:20:54] 2025-11-21 18:19:57,976 | INFO     | --------------------------------------------------
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | PanDA job id: 6893850171
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | task id: 47523449
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | errors: (none)
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | pilot state: finished 
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | transexitcode: 0
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | exeerrorcode: 0
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | exeerrordiag: 
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | exitcode: 0
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | exitmsg: OK
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | cpuconsumptiontime: 194011 s
[2025-11-21 13:20:54] 2025-11-21 18:19:57,977 | INFO     | nevents: 1000
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | neventsw: 0
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | pid: 1784667
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | pgrp: 1784667
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | corecount: 9
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | event service: False
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | sizes: {0: 2298806, 11: 2299096, 47851: 2345808, 47852: 2345835, 47864: 2354885, 47865: 2354941, 47894: 2355315}
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | --------------------------------------------------
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | 
[2025-11-21 13:20:54] 2025-11-21 18:19:57,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-21 13:20:54] 2025-11-21 18:19:58,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | job 6893850171 has completed (purged errors)
[2025-11-21 13:20:54] 2025-11-21 18:19:58,078 | INFO     | overall cleanup function is called
[2025-11-21 13:20:54] 2025-11-21 18:19:59,189 | INFO     | --- collectZombieJob: --- 10, [1784667]
[2025-11-21 13:20:54] 2025-11-21 18:19:59,189 | INFO     | zombie collector waiting for pid 1784667
[2025-11-21 13:20:54] 2025-11-21 18:19:59,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 13:20:54] 2025-11-21 18:19:59,190 | INFO     | collected zombie processes
[2025-11-21 13:20:54] 2025-11-21 18:19:59,190 | INFO     | will attempt to kill all subprocesses of pid=1784667
[2025-11-21 13:20:54] 2025-11-21 18:20:01,395 | INFO     | process IDs to be killed: [1784667] (in reverse order)
[2025-11-21 13:20:54] 2025-11-21 18:20:01,728 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 13:20:54] 2025-11-21 18:20:01,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 13:20:54] 2025-11-21 18:20:01,816 | INFO     | did not find any defunct processes belonging to 1784667
[2025-11-21 13:20:54] 2025-11-21 18:20:01,894 | INFO     | did not find any defunct processes belonging to 1784667
[2025-11-21 13:20:54] 2025-11-21 18:20:01,903 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 13:20:54] 2025-11-21 18:20:01,904 | INFO     | ready for new job
[2025-11-21 13:20:54] 2025-11-21 18:20:01,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 13:20:54] 2025-11-21 18:20:01,933 | INFO     | ***************************************
[2025-11-21 13:20:54] 2025-11-21 18:20:01,934 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 13:20:54] 2025-11-21 18:20:01,934 | INFO     | ***************************************
[2025-11-21 13:20:54] 2025-11-21 18:20:01,934 | INFO     | 
[2025-11-21 13:20:54] 2025-11-21 18:20:01,939 | INFO     | architecture information:
[2025-11-21 13:20:54] 2025-11-21 18:20:01,947 | INFO     | executing command: cat /etc/os-release
[2025-11-21 13:20:54] 2025-11-21 18:20:02,044 | INFO     | cat /etc/os-release:
[2025-11-21 13:20:54] NAME="CentOS Linux"
[2025-11-21 13:20:54] VERSION="7 (Core)"
[2025-11-21 13:20:54] ID="centos"
[2025-11-21 13:20:54] ID_LIKE="rhel fedora"
[2025-11-21 13:20:54] VERSION_ID="7"
[2025-11-21 13:20:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 13:20:54] ANSI_COLOR="0;31"
[2025-11-21 13:20:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 13:20:54] HOME_URL="https://www.centos.org/"
[2025-11-21 13:20:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 13:20:54] 
[2025-11-21 13:20:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 13:20:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 13:20:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 13:20:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 13:20:54] 
[2025-11-21 13:20:54] 2025-11-21 18:20:02,045 | INFO     | ***************************************
[2025-11-21 13:20:54] 2025-11-21 18:20:02,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-21 13:20:54] 2025-11-21 18:20:02,644 | INFO     | sufficient remaining disk space (120424759296 B)
[2025-11-21 13:20:54] 2025-11-21 18:20:02,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 13:20:54] 2025-11-21 18:20:02,644 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 13:20:54] 2025-11-21 18:20:02,644 | INFO     | update_server=False
[2025-11-21 13:20:54] 2025-11-21 18:20:02,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 13:20:54] 2025-11-21 18:20:02,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 13:20:54] 2025-11-21 18:20:02,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:20:54] 2025-11-21 18:20:02,648 | INFO     | aborting loop
[2025-11-21 13:20:54] 2025-11-21 18:20:02,734 | INFO     | all data control threads have been joined
[2025-11-21 13:20:54] 2025-11-21 18:20:02,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 13:20:54] 2025-11-21 18:20:02,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:20:54] 2025-11-21 18:20:03,651 | INFO     | [job] retrieve thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:03,654 | INFO     | [job] job monitor thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:03,741 | INFO     | [data] control thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,004 | INFO     | [job] queue monitor thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,028 | INFO     | [job] validate thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,029 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,109 | INFO     | all payload control threads have been joined
[2025-11-21 13:20:54] 2025-11-21 18:20:04,311 | INFO     | all job control threads have been joined
[2025-11-21 13:20:54] 2025-11-21 18:20:04,434 | INFO     | [payload] failed_post thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,655 | INFO     | [data] copytool_out thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,713 | INFO     | [payload] validate_post thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,875 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:04,876 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:05,074 | INFO     | [data] copytool_in thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:05,102 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:05,117 | INFO     | [payload] control thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:05,317 | INFO     | [job] control thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:06,871 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 13:20:54] 2025-11-21 18:20:35,517 | INFO     | PID=1761593 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 13:20:54] 2025-11-21 18:20:35,517 | INFO     | .. there are 62 such processes running
[2025-11-21 13:20:54] 2025-11-21 18:20:35,518 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 13:20:54] 2025-11-21 18:20:35,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 13:20:54] 2025-11-21 18:20:35,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 13:20:54] 2025-11-21 18:20:45,928 | INFO     | [monitor] cgroup control has ended
[2025-11-21 13:20:54] 2025-11-21 18:20:46,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071894374208)>', '<ExcThread(monitor, started 140071382521600)>']
[2025-11-21 13:20:54] 2025-11-21 18:20:47,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 13:20:54] 2025-11-21 18:20:47,603 | INFO     | [monitor] control thread has ended
[2025-11-21 13:20:54] 2025-11-21 18:20:51,831 | INFO     | all workflow threads have been joined
[2025-11-21 13:20:54] 2025-11-21 18:20:51,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 13:20:54] 2025-11-21 18:20:51,832 | INFO     | traces error code: 0
[2025-11-21 13:20:54] 2025-11-21 18:20:51,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 13:20:54] 2025-11-21 18:20:52,224 [wrapper] ==== pilot stdout END ====
[2025-11-21 13:20:54] 2025-11-21 18:20:52,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 13:20:54] 2025-11-21 18:20:52,320 [wrapper] pilotpid: 1761593
[2025-11-21 13:20:54] 2025-11-21 18:20:52,367 [wrapper] Pilot exit status: 0
[2025-11-21 13:20:54] 2025-11-21 18:20:52,570 [wrapper] pandaids: 6893850171
[2025-11-21 13:20:54] 2025-11-21 18:20:53,036 [wrapper] cleanup supervisor_pilot  453743 1761595
[2025-11-21 13:20:54] 2025-11-21 18:20:53,046 [wrapper] Test setup, not cleaning
[2025-11-21 13:20:54] 2025-11-21 18:20:53,059 [wrapper] apfmon messages muted
[2025-11-21 13:20:54] 2025-11-21 18:20:53,066 [wrapper] ==== wrapper stdout END ====
[2025-11-21 13:20:54] 2025-11-21 18:20:53,082 [wrapper] ==== wrapper stderr END ====
[2025-11-21 13:20:54]  *** Error codes and diagnostics ***
[2025-11-21 13:20:54]     "exeErrorCode": 0,
[2025-11-21 13:20:54]     "exeErrorDiag": "",
[2025-11-21 13:20:54]     "pilotErrorCode": 0,
[2025-11-21 13:20:54]     "pilotErrorDiag": "",
[2025-11-21 13:20:54]  *** Listing of results directory ***
[2025-11-21 13:20:54] total 1308576
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:00 pilot3.tar.gz
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:07 queuedata.json
[2025-11-21 13:20:54] -rwx------. 1 boincer umatlas     36292 Nov 20 06:08 runpilot2-wrapper.sh
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 13:20:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:00 run_atlas
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:00 job.xml
[2025-11-21 13:20:54] -rw-r--r--. 2 boincer umatlas 409092852 Nov 21 00:00 EVNT.47493127._000316.pool.root.1
[2025-11-21 13:20:54] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 00:00 input.tar.gz
[2025-11-21 13:20:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:00 start_atlas.sh
[2025-11-21 13:20:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:00 shared
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:00 boinc_lockfile
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:01 pandaJob.out
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas        57 Nov 21 00:01 setup.sh.local
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas    989817 Nov 21 00:01 agis_schedconf.cvmfs.json
[2025-11-21 13:20:54] drwx------. 5 boincer umatlas      4096 Nov 21 00:01 pilot3
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas       533 Nov 21 13:02 boinc_task_state.xml
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas 910554355 Nov 21 13:16 HITS.47523449._003158.pool.root.1
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas      6945 Nov 21 13:18 init_data.xml
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas      1048 Nov 21 13:19 memory_monitor_summary.json
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas   1526164 Nov 21 13:19 agis_ddmendpoints.agis.ALL.json
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas   2082320 Nov 21 13:19 log.47523449._003158.job.log.tgz.1
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas        95 Nov 21 13:19 pilot_heartbeat.json
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas      8581 Nov 21 13:19 heartbeat.json
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas      4825 Nov 21 13:20 pilotlog.txt
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas   6116244 Nov 21 13:20 log.47523449._003158.job.log.1
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 13:20 boinc_mmap_file
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas        29 Nov 21 13:20 wrapper_checkpoint.txt
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas       353 Nov 21 13:20 output.list
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas       620 Nov 21 13:20 runtime_log
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas   8222720 Nov 21 13:20 result.tar.gz
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas       659 Nov 21 13:20 XvLNDmXhHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsaHKDm0K1v5n.diag
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 13:20 runtime_log.err
[2025-11-21 13:20:54] -rw-r--r--. 1 boincer umatlas     21123 Nov 21 13:20 stderr.txt
[2025-11-21 13:20:54] HITS file was successfully produced:
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas 910554355 Nov 21 13:16 shared/HITS.pool.root.1
[2025-11-21 13:20:54]  *** Contents of shared directory: ***
[2025-11-21 13:20:54] total 1297360
[2025-11-21 13:20:54] -rw-r--r--. 2 boincer umatlas 409092852 Nov 21 00:00 ATLAS.root_0
[2025-11-21 13:20:54] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 00:00 input.tar.gz
[2025-11-21 13:20:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:00 start_atlas.sh
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas 910554355 Nov 21 13:16 HITS.pool.root.1
[2025-11-21 13:20:54] -rw-------. 1 boincer umatlas   8222720 Nov 21 13:20 result.tar.gz
13:20:56 (1740953): run_atlas exited; CPU time 195390.749701
13:20:56 (1740953): called boinc_finish(0)

</stderr_txt>
]]>

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