Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:15 (1756755): wrapper (7.7.26015): starting
00:01:15 (1756755): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:01:15] Arguments: --nthreads 9
[2025-11-21 00:01:15] Threads: 9
[2025-11-21 00:01:15] Checking for CVMFS
[2025-11-21 00:01:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:01:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:01:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:01:16] 2.13.3.0 12763 22357 227932 153108 2 288 38109578 40960001 18329 16776704 0 173655815 99.746 101135583 35324 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 00:01:16] CVMFS is ok
[2025-11-21 00:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:01:16] Further information can be found at the LHC@home message board.
[2025-11-21 00:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:01:16] Checking for apptainer binary...
[2025-11-21 00:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:01:16] Running /usr/bin/apptainer --version
[2025-11-21 00:01:16] apptainer version 1.4.4-1.el9
[2025-11-21 00:01:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:01:16] c7-2-17.aglt2.org
[2025-11-21 00:01:16] apptainer works
[2025-11-21 00:01:17] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:01:17] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:01:17] Starting ATLAS job with PandaID=6893846328
[2025-11-21 00:01:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 17:35:40]  *** The last 200 lines of the pilot log: ***
[2025-11-21 17:35:40] 2025-11-21 22:34:56,508 | INFO     | fitting pss+swap vs Time
[2025-11-21 17:35:40] 2025-11-21 22:34:56,509 | INFO     | sum of square deviations: 343764906804.08185
[2025-11-21 17:35:40] 2025-11-21 22:34:56,528 | INFO     | sum of deviations: 1705038969937.8223
[2025-11-21 17:35:40] 2025-11-21 22:34:56,528 | INFO     | mean x: 1763732891.3893719
[2025-11-21 17:35:40] 2025-11-21 22:34:56,528 | INFO     | mean y: 3062177.9111111113
[2025-11-21 17:35:40] 2025-11-21 22:34:56,528 | INFO     | intersect: -8744873556.24418
[2025-11-21 17:35:40] 2025-11-21 22:34:56,529 | INFO     | chi2: 8.86348139194135
[2025-11-21 17:35:40] 2025-11-21 22:34:56,530 | INFO     | sum of square deviations: 338807158767.89935
[2025-11-21 17:35:40] 2025-11-21 22:34:56,548 | INFO     | sum of deviations: 2116711750058.9963
[2025-11-21 17:35:40] 2025-11-21 22:34:56,549 | INFO     | mean x: 1763732738.900971
[2025-11-21 17:35:40] 2025-11-21 22:34:56,549 | INFO     | mean y: 3074840.7058252427
[2025-11-21 17:35:40] 2025-11-21 22:34:56,549 | INFO     | intersect: -11015918459.116793
[2025-11-21 17:35:40] 2025-11-21 22:34:56,550 | INFO     | chi2: 4.99832716207144
[2025-11-21 17:35:40] 2025-11-21 22:34:56,550 | INFO     | current chi2=4.99832716207144 (change=43.607630669638425 %)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,551 | INFO     | sum of square deviations: 333897318606.4356
[2025-11-21 17:35:40] 2025-11-21 22:34:56,569 | INFO     | sum of deviations: 2403068810802.363
[2025-11-21 17:35:40] 2025-11-21 22:34:56,569 | INFO     | mean x: 1763732586.412683
[2025-11-21 17:35:40] 2025-11-21 22:34:56,569 | INFO     | mean y: 3083724.864390244
[2025-11-21 17:35:40] 2025-11-21 22:34:56,569 | INFO     | intersect: -12690551512.140507
[2025-11-21 17:35:40] 2025-11-21 22:34:56,570 | INFO     | chi2: 2.774254595055132
[2025-11-21 17:35:40] 2025-11-21 22:34:56,570 | INFO     | current chi2=2.774254595055132 (change=44.49633837282858 %)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,571 | INFO     | sum of square deviations: 329035091480.03534
[2025-11-21 17:35:40] 2025-11-21 22:34:56,588 | INFO     | sum of deviations: 2459644317813.1187
[2025-11-21 17:35:40] 2025-11-21 22:34:56,589 | INFO     | mean x: 1763732433.9235294
[2025-11-21 17:35:40] 2025-11-21 22:34:56,589 | INFO     | mean y: 3085494.0784313725
[2025-11-21 17:35:40] 2025-11-21 22:34:56,589 | INFO     | intersect: -13181388051.673859
[2025-11-21 17:35:40] 2025-11-21 22:34:56,590 | INFO     | chi2: 2.547960136647644
[2025-11-21 17:35:40] 2025-11-21 22:34:56,590 | INFO     | current chi2=2.547960136647644 (change=8.156946331127575 %)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,590 | INFO     | right removable region: 1019
[2025-11-21 17:35:40] 2025-11-21 22:34:56,591 | INFO     | sum of square deviations: 338805650237.89923
[2025-11-21 17:35:40] 2025-11-21 22:34:56,609 | INFO     | sum of deviations: 1392899573800.2324
[2025-11-21 17:35:40] 2025-11-21 22:34:56,609 | INFO     | mean x: 1763733043.900971
[2025-11-21 17:35:40] 2025-11-21 22:34:56,609 | INFO     | mean y: 3071767.168932039
[2025-11-21 17:35:40] 2025-11-21 22:34:56,609 | INFO     | intersect: -7247996812.773656
[2025-11-21 17:35:40] 2025-11-21 22:34:56,610 | INFO     | chi2: 6.580231129017947
[2025-11-21 17:35:40] 2025-11-21 22:34:56,610 | INFO     | current chi2=6.580231129017947 (change=25.760196946984372 %)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,611 | INFO     | sum of square deviations: 333894615715.5377
[2025-11-21 17:35:40] 2025-11-21 22:34:56,630 | INFO     | sum of deviations: 1317279153958.091
[2025-11-21 17:35:40] 2025-11-21 22:34:56,630 | INFO     | mean x: 1763733196.407805
[2025-11-21 17:35:40] 2025-11-21 22:34:56,630 | INFO     | mean y: 3074114.4136585365
[2025-11-21 17:35:40] 2025-11-21 22:34:56,630 | INFO     | intersect: -6955196140.38805
[2025-11-21 17:35:40] 2025-11-21 22:34:56,631 | INFO     | chi2: 6.517456947411759
[2025-11-21 17:35:40] 2025-11-21 22:34:56,631 | INFO     | current chi2=6.517456947411759 (change=0.9539814084852151 %)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,631 | INFO     | left removable region: 20
[2025-11-21 17:35:40] 2025-11-21 22:34:56,632 | INFO     | sum of square deviations: 309123706174.6268
[2025-11-21 17:35:40] 2025-11-21 22:34:56,649 | INFO     | sum of deviations: 1938710170593.2395
[2025-11-21 17:35:40] 2025-11-21 22:34:56,649 | INFO     | mean x: 1763733013.4664664
[2025-11-21 17:35:40] 2025-11-21 22:34:56,649 | INFO     | mean y: 3101699.5295295296
[2025-11-21 17:35:40] 2025-11-21 22:34:56,649 | INFO     | intersect: -11058382952.465649
[2025-11-21 17:35:40] 2025-11-21 22:34:56,650 | INFO     | chi2: 0.10496709667697887
[2025-11-21 17:35:40] 2025-11-21 22:34:56,650 | INFO     | current memory leak: 6.27 B/s (using 999 data points, chi2=0.10)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,651 | INFO     | could have reported an average CPU frequency of 3225 MHz (38 samples)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,651 | INFO     | ..............................
[2025-11-21 17:35:40] 2025-11-21 22:34:56,651 | INFO     | . Timing measurements:
[2025-11-21 17:35:40] 2025-11-21 22:34:56,651 | INFO     | . get job = 0 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,651 | INFO     | . initial setup = 2 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,652 | INFO     | . payload setup = 15 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,652 | INFO     | . stage-in = 0 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,652 | INFO     | . payload execution = 63132 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,652 | INFO     | . stage-out = 3 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,652 | INFO     | . log creation = 1 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,652 | INFO     | ..............................
[2025-11-21 17:35:40] 2025-11-21 22:34:56,731 | INFO     | 
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | job summary report
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | --------------------------------------------------
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | PanDA job id: 6893846328
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | task id: 47523449
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | errors: (none)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | pilot state: finished 
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | transexitcode: 0
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | exeerrorcode: 0
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | exeerrordiag: 
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | exitcode: 0
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | exitmsg: OK
[2025-11-21 17:35:40] 2025-11-21 22:34:56,732 | INFO     | cpuconsumptiontime: 194736 s
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | nevents: 1000
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | neventsw: 0
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | pid: 1801204
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | pgrp: 1801204
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | corecount: 9
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | event service: False
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | sizes: {0: 2298807, 11: 2299097, 63151: 2352168, 63155: 2361162, 63156: 2361218, 63172: 2361464}
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | --------------------------------------------------
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | 
[2025-11-21 17:35:40] 2025-11-21 22:34:56,733 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-21 17:35:40] 2025-11-21 22:34:56,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 17:35:40] 2025-11-21 22:34:56,759 | INFO     | job 6893846328 has completed (purged errors)
[2025-11-21 17:35:40] 2025-11-21 22:34:56,760 | INFO     | overall cleanup function is called
[2025-11-21 17:35:40] 2025-11-21 22:34:57,785 | INFO     | --- collectZombieJob: --- 10, [1801204]
[2025-11-21 17:35:40] 2025-11-21 22:34:57,786 | INFO     | zombie collector waiting for pid 1801204
[2025-11-21 17:35:40] 2025-11-21 22:34:57,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 17:35:40] 2025-11-21 22:34:57,786 | INFO     | collected zombie processes
[2025-11-21 17:35:40] 2025-11-21 22:34:57,786 | INFO     | will attempt to kill all subprocesses of pid=1801204
[2025-11-21 17:35:40] 2025-11-21 22:34:58,412 | INFO     | process IDs to be killed: [1801204] (in reverse order)
[2025-11-21 17:35:40] 2025-11-21 22:34:58,604 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 17:35:40] 2025-11-21 22:34:58,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 17:35:40] 2025-11-21 22:34:58,684 | INFO     | did not find any defunct processes belonging to 1801204
[2025-11-21 17:35:40] 2025-11-21 22:34:58,737 | INFO     | did not find any defunct processes belonging to 1801204
[2025-11-21 17:35:40] 2025-11-21 22:34:58,750 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 17:35:40] 2025-11-21 22:34:58,751 | INFO     | ready for new job
[2025-11-21 17:35:40] 2025-11-21 22:34:58,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 17:35:40] 2025-11-21 22:34:58,760 | INFO     | ***************************************
[2025-11-21 17:35:40] 2025-11-21 22:34:58,761 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 17:35:40] 2025-11-21 22:34:58,761 | INFO     | ***************************************
[2025-11-21 17:35:40] 2025-11-21 22:34:58,761 | INFO     | 
[2025-11-21 17:35:40] 2025-11-21 22:34:58,765 | INFO     | architecture information:
[2025-11-21 17:35:40] 2025-11-21 22:34:58,769 | INFO     | executing command: cat /etc/os-release
[2025-11-21 17:35:40] 2025-11-21 22:34:58,814 | INFO     | cat /etc/os-release:
[2025-11-21 17:35:40] NAME="CentOS Linux"
[2025-11-21 17:35:40] VERSION="7 (Core)"
[2025-11-21 17:35:40] ID="centos"
[2025-11-21 17:35:40] ID_LIKE="rhel fedora"
[2025-11-21 17:35:40] VERSION_ID="7"
[2025-11-21 17:35:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 17:35:40] ANSI_COLOR="0;31"
[2025-11-21 17:35:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 17:35:40] HOME_URL="https://www.centos.org/"
[2025-11-21 17:35:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 17:35:40] 
[2025-11-21 17:35:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 17:35:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 17:35:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 17:35:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 17:35:40] 
[2025-11-21 17:35:40] 2025-11-21 22:34:58,814 | INFO     | ***************************************
[2025-11-21 17:35:40] 2025-11-21 22:34:59,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-21 17:35:40] 2025-11-21 22:34:59,392 | INFO     | sufficient remaining disk space (120279007232 B)
[2025-11-21 17:35:40] 2025-11-21 22:34:59,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 17:35:40] 2025-11-21 22:34:59,392 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 17:35:40] 2025-11-21 22:34:59,392 | INFO     | update_server=False
[2025-11-21 17:35:40] 2025-11-21 22:34:59,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 17:35:40] 2025-11-21 22:34:59,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 17:35:40] 2025-11-21 22:34:59,507 | INFO     | all job control threads have been joined
[2025-11-21 17:35:40] 2025-11-21 22:34:59,590 | INFO     | all data control threads have been joined
[2025-11-21 17:35:40] 2025-11-21 22:34:59,624 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 17:35:40] 2025-11-21 22:34:59,624 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 17:35:40] 2025-11-21 22:34:59,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:35:40] 2025-11-21 22:34:59,625 | INFO     | will abort loop
[2025-11-21 17:35:40] 2025-11-21 22:35:00,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 17:35:40] 2025-11-21 22:35:00,397 | INFO     | [job] retrieve thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,430 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,513 | INFO     | [job] control thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,514 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,596 | INFO     | [data] control thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,630 | INFO     | [job] job monitor thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,885 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:00,903 | INFO     | all payload control threads have been joined
[2025-11-21 17:35:40] 2025-11-21 22:35:01,028 | INFO     | [payload] failed_post thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:01,340 | INFO     | [payload] validate_post thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:01,399 | INFO     | [data] copytool_out thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:01,416 | INFO     | [data] copytool_in thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:01,670 | INFO     | [job] validate thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:01,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:35:40] 2025-11-21 22:35:01,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:01,914 | INFO     | [payload] control thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:02,756 | INFO     | [job] queue monitor thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:04,136 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 17:35:40] 2025-11-21 22:35:29,555 | INFO     | PID=1770934 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 17:35:40] 2025-11-21 22:35:29,555 | INFO     | .. there are 59 such processes running
[2025-11-21 17:35:40] 2025-11-21 22:35:29,556 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 17:35:40] 2025-11-21 22:35:29,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 17:35:40] 2025-11-21 22:35:29,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 17:35:40] 2025-11-21 22:35:32,671 | INFO     | [monitor] cgroup control has ended
[2025-11-21 17:35:40] 2025-11-21 22:35:34,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626282960704)>', '<ExcThread(monitor, started 140625768847104)>']
[2025-11-21 17:35:40] 2025-11-21 22:35:34,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 17:35:40] 2025-11-21 22:35:34,589 | INFO     | [monitor] control thread has ended
[2025-11-21 17:35:40] 2025-11-21 22:35:39,156 | INFO     | all workflow threads have been joined
[2025-11-21 17:35:40] 2025-11-21 22:35:39,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 17:35:40] 2025-11-21 22:35:39,179 | INFO     | traces error code: 0
[2025-11-21 17:35:40] 2025-11-21 22:35:39,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 17:35:40] 2025-11-21 22:35:39,362 [wrapper] ==== pilot stdout END ====
[2025-11-21 17:35:40] 2025-11-21 22:35:39,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 17:35:40] 2025-11-21 22:35:39,392 [wrapper] pilotpid: 1770934
[2025-11-21 17:35:40] 2025-11-21 22:35:39,397 [wrapper] Pilot exit status: 0
[2025-11-21 17:35:40] 2025-11-21 22:35:39,479 [wrapper] pandaids: 6893846328
[2025-11-21 17:35:40] 2025-11-21 22:35:39,858 [wrapper] cleanup supervisor_pilot 1923530 1770935
[2025-11-21 17:35:40] 2025-11-21 22:35:39,862 [wrapper] Test setup, not cleaning
[2025-11-21 17:35:40] 2025-11-21 22:35:39,865 [wrapper] apfmon messages muted
[2025-11-21 17:35:40] 2025-11-21 22:35:39,867 [wrapper] ==== wrapper stdout END ====
[2025-11-21 17:35:40] 2025-11-21 22:35:39,869 [wrapper] ==== wrapper stderr END ====
[2025-11-21 17:35:40]  *** Error codes and diagnostics ***
[2025-11-21 17:35:40]     "exeErrorCode": 0,
[2025-11-21 17:35:40]     "exeErrorDiag": "",
[2025-11-21 17:35:40]     "pilotErrorCode": 0,
[2025-11-21 17:35:40]     "pilotErrorDiag": "",
[2025-11-21 17:35:40]  *** Listing of results directory ***
[2025-11-21 17:35:40] total 1316800
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 17:35:40] -rwx------. 1 boincer umatlas     36292 Nov 20 05:20 runpilot2-wrapper.sh
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:21 queuedata.json
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 17:35:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:01 run_atlas
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:01 job.xml
[2025-11-21 17:35:40] -rw-r--r--. 2 boincer umatlas 412913708 Nov 21 00:01 EVNT.47493127._000221.pool.root.1
[2025-11-21 17:35:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-21 17:35:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:01 shared
[2025-11-21 17:35:40] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 00:01 input.tar.gz
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:01 boinc_lockfile
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 00:01 pandaJob.out
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas        57 Nov 21 00:01 setup.sh.local
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas    989817 Nov 21 00:01 agis_schedconf.cvmfs.json
[2025-11-21 17:35:40] drwx------. 5 boincer umatlas      4096 Nov 21 00:01 pilot3
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas       533 Nov 21 17:20 boinc_task_state.xml
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas      6945 Nov 21 17:28 init_data.xml
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas 911673843 Nov 21 17:33 HITS.47523449._002210.pool.root.1
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas      1055 Nov 21 17:34 memory_monitor_summary.json
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas   1526164 Nov 21 17:34 agis_ddmendpoints.agis.ALL.json
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas   2237022 Nov 21 17:34 log.47523449._002210.job.log.tgz.1
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas      8587 Nov 21 17:34 heartbeat.json
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas        95 Nov 21 17:35 pilot_heartbeat.json
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas      5011 Nov 21 17:35 pilotlog.txt
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas        29 Nov 21 17:35 wrapper_checkpoint.txt
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas   7702567 Nov 21 17:35 log.47523449._002210.job.log.1
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas       353 Nov 21 17:35 output.list
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas       620 Nov 21 17:35 runtime_log
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas   9963520 Nov 21 17:35 result.tar.gz
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 17:35 runtime_log.err
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas       661 Nov 21 17:35 7R5LDmswGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaNHKDmzH5sLn.diag
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 17:35 boinc_mmap_file
[2025-11-21 17:35:40] -rw-r--r--. 1 boincer umatlas     21129 Nov 21 17:35 stderr.txt
[2025-11-21 17:35:40] HITS file was successfully produced:
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas 911673843 Nov 21 17:33 shared/HITS.pool.root.1
[2025-11-21 17:35:40]  *** Contents of shared directory: ***
[2025-11-21 17:35:40] total 1303884
[2025-11-21 17:35:40] -rw-r--r--. 2 boincer umatlas 412913708 Nov 21 00:01 ATLAS.root_0
[2025-11-21 17:35:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-21 17:35:40] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 00:01 input.tar.gz
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas 911673843 Nov 21 17:33 HITS.pool.root.1
[2025-11-21 17:35:40] -rw-------. 1 boincer umatlas   9963520 Nov 21 17:35 result.tar.gz
17:35:41 (1756755): run_atlas exited; CPU time 196154.618907
17:35:41 (1756755): called boinc_finish(0)

</stderr_txt>
]]>

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