Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:38 (2984288): wrapper (7.7.26015): starting
05:47:38 (2984288): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 05:47:38] Arguments: --nthreads 8
[2025-11-21 05:47:38] Threads: 8
[2025-11-21 05:47:38] Checking for CVMFS
[2025-11-21 05:47:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:47:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:47:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:47:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:47:39] 2.13.2.0 5745 26429 186568 153121 2 147 22164480 39288833 4901 16776704 0 13738581 99.538 14087017 35897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 05:47:39] CVMFS is ok
[2025-11-21 05:47:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:47:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 05:47:39] Further information can be found at the LHC@home message board.
[2025-11-21 05:47:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:47:39] Checking for apptainer binary...
[2025-11-21 05:47:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 05:47:39] Running /usr/bin/apptainer --version
[2025-11-21 05:47:39] apptainer version 1.4.4-1.el9
[2025-11-21 05:47:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:47:39] c-211-4.aglt2.org
[2025-11-21 05:47:39] apptainer works
[2025-11-21 05:47:39] Set ATHENA_PROC_NUMBER=8
[2025-11-21 05:47:39] Set ATHENA_CORE_NUMBER=8
[2025-11-21 05:47:39] Starting ATLAS job with PandaID=6893876913
[2025-11-21 05:47:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 13:22:38]  *** The last 200 lines of the pilot log: ***
[2025-11-22 13:22:38] 2025-11-22 18:22:02,226 | INFO     | fitting pss+swap vs Time
[2025-11-22 13:22:38] 2025-11-22 18:22:02,230 | INFO     | sum of square deviations: 2005019823471.3547
[2025-11-22 13:22:38] 2025-11-22 18:22:02,328 | INFO     | sum of deviations: 3673156323708.833
[2025-11-22 13:22:38] 2025-11-22 18:22:02,328 | INFO     | mean x: 1763778888.8738594
[2025-11-22 13:22:38] 2025-11-22 18:22:02,329 | INFO     | mean y: 3025469.1567364465
[2025-11-22 13:22:38] 2025-11-22 18:22:02,329 | INFO     | intersect: -3228182274.2532454
[2025-11-22 13:22:38] 2025-11-22 18:22:02,331 | INFO     | chi2: 12.543657436304336
[2025-11-22 13:22:38] 2025-11-22 18:22:02,334 | INFO     | sum of square deviations: 1988921899453.6208
[2025-11-22 13:22:38] 2025-11-22 18:22:02,344 | INFO     | time since job start (113653s) is within the limit (172800.0s)
[2025-11-22 13:22:38] 2025-11-22 18:22:02,416 | INFO     | sum of deviations: 4351794995192.448
[2025-11-22 13:22:38] 2025-11-22 18:22:02,417 | INFO     | mean x: 1763778736.3842843
[2025-11-22 13:22:38] 2025-11-22 18:22:02,417 | INFO     | mean y: 3031897.090419806
[2025-11-22 13:22:38] 2025-11-22 18:22:02,417 | INFO     | intersect: -3856146022.2298727
[2025-11-22 13:22:38] 2025-11-22 18:22:02,419 | INFO     | chi2: 9.214337339450724
[2025-11-22 13:22:38] 2025-11-22 18:22:02,419 | INFO     | current chi2=9.214337339450724 (change=26.541860807022406 %)
[2025-11-22 13:22:38] 2025-11-22 18:22:02,422 | INFO     | sum of square deviations: 1972910395660.4783
[2025-11-22 13:22:38] 2025-11-22 18:22:02,503 | INFO     | sum of deviations: 5027379950663.418
[2025-11-22 13:22:38] 2025-11-22 18:22:02,504 | INFO     | mean x: 1763778583.8947651
[2025-11-22 13:22:38] 2025-11-22 18:22:02,504 | INFO     | mean y: 3038331.8893685914
[2025-11-22 13:22:38] 2025-11-22 18:22:02,504 | INFO     | intersect: -4491430909.889631
[2025-11-22 13:22:38] 2025-11-22 18:22:02,506 | INFO     | chi2: 5.950912232737582
[2025-11-22 13:22:38] 2025-11-22 18:22:02,507 | INFO     | current chi2=5.950912232737582 (change=35.41681823109461 %)
[2025-11-22 13:22:38] 2025-11-22 18:22:02,509 | INFO     | sum of square deviations: 1956984966259.2368
[2025-11-22 13:22:38] 2025-11-22 18:22:02,707 | INFO     | sum of deviations: 5604081174412.99
[2025-11-22 13:22:38] 2025-11-22 18:22:02,707 | INFO     | mean x: 1763778431.4047618
[2025-11-22 13:22:38] 2025-11-22 18:22:02,708 | INFO     | mean y: 3043851.8863636362
[2025-11-22 13:22:38] 2025-11-22 18:22:02,708 | INFO     | intersect: -5047765261.9746275
[2025-11-22 13:22:38] 2025-11-22 18:22:02,715 | INFO     | chi2: 3.3493995453496717
[2025-11-22 13:22:38] 2025-11-22 18:22:02,715 | INFO     | current chi2=3.3493995453496717 (change=43.71619989749275 %)
[2025-11-22 13:22:38] 2025-11-22 18:22:02,718 | INFO     | sum of square deviations: 1941145042402.9377
[2025-11-22 13:22:38] 2025-11-22 18:22:02,825 | INFO     | sum of deviations: 5848079540637.514
[2025-11-22 13:22:38] 2025-11-22 18:22:02,825 | INFO     | mean x: 1763778278.9126425
[2025-11-22 13:22:38] 2025-11-22 18:22:02,825 | INFO     | mean y: 3046199.978296256
[2025-11-22 13:22:38] 2025-11-22 18:22:02,826 | INFO     | intersect: -5310681235.021261
[2025-11-22 13:22:38] 2025-11-22 18:22:02,828 | INFO     | chi2: 2.801647635678327
[2025-11-22 13:22:38] 2025-11-22 18:22:02,829 | INFO     | current chi2=2.801647635678327 (change=16.353734520321623 %)
[2025-11-22 13:22:38] 2025-11-22 18:22:02,829 | INFO     | right removable region: 1842
[2025-11-22 13:22:38] 2025-11-22 18:22:02,831 | INFO     | sum of square deviations: 1988917724017.1575
[2025-11-22 13:22:38] 2025-11-22 18:22:02,913 | INFO     | sum of deviations: 3212111641844.6704
[2025-11-22 13:22:38] 2025-11-22 18:22:02,914 | INFO     | mean x: 1763779041.3832078
[2025-11-22 13:22:38] 2025-11-22 18:22:02,914 | INFO     | mean y: 3029832.1689989236
[2025-11-22 13:22:38] 2025-11-22 18:22:02,914 | INFO     | intersect: -2845481759.866953
[2025-11-22 13:22:38] 2025-11-22 18:22:02,917 | INFO     | chi2: 10.724156069887421
[2025-11-22 13:22:38] 2025-11-22 18:22:02,917 | INFO     | current chi2=10.724156069887421 (change=14.505349621162681 %)
[2025-11-22 13:22:38] 2025-11-22 18:22:02,917 | INFO     | left removable region: 10
[2025-11-22 13:22:38] 2025-11-22 18:22:02,920 | INFO     | sum of square deviations: 1906591400129.6062
[2025-11-22 13:22:38] 2025-11-22 18:22:03,000 | INFO     | sum of deviations: 5253653091146.086
[2025-11-22 13:22:38] 2025-11-22 18:22:03,001 | INFO     | mean x: 1763778553.4323144
[2025-11-22 13:22:38] 2025-11-22 18:22:03,001 | INFO     | mean y: 3052070.903930131
[2025-11-22 13:22:38] 2025-11-22 18:22:03,001 | INFO     | intersect: -4857077188.415581
[2025-11-22 13:22:38] 2025-11-22 18:22:03,004 | INFO     | chi2: 0.8816338810436377
[2025-11-22 13:22:38] 2025-11-22 18:22:03,004 | INFO     | current memory leak: 2.76 B/s (using 1832 data points, chi2=0.88)
[2025-11-22 13:22:38] 2025-11-22 18:22:03,007 | INFO     | could have reported an average CPU frequency of 2601 MHz (65 samples)
[2025-11-22 13:22:38] 2025-11-22 18:22:03,007 | INFO     | ..............................
[2025-11-22 13:22:38] 2025-11-22 18:22:03,007 | INFO     | . Timing measurements:
[2025-11-22 13:22:38] 2025-11-22 18:22:03,007 | INFO     | . get job = 0 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,007 | INFO     | . initial setup = 2 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,007 | INFO     | . payload setup = 5 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,008 | INFO     | . stage-in = 0 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,008 | INFO     | . payload execution = 113598 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,008 | INFO     | . stage-out = 7 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,008 | INFO     | . log creation = 1 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,008 | INFO     | ..............................
[2025-11-22 13:22:38] 2025-11-22 18:22:03,685 | INFO     | 
[2025-11-22 13:22:38] 2025-11-22 18:22:03,689 | INFO     | job summary report
[2025-11-22 13:22:38] 2025-11-22 18:22:03,689 | INFO     | --------------------------------------------------
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | PanDA job id: 6893876913
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | task id: 47523449
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | errors: (none)
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | pilot state: finished 
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | transexitcode: 0
[2025-11-22 13:22:38] 2025-11-22 18:22:03,693 | INFO     | exeerrorcode: 0
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | exeerrordiag: 
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | exitcode: 0
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | exitmsg: OK
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | cpuconsumptiontime: 304700 s
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | nevents: 1000
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | neventsw: 0
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | pid: 2994351
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | pgrp: 2994351
[2025-11-22 13:22:38] 2025-11-22 18:22:03,694 | INFO     | corecount: 8
[2025-11-22 13:22:38] 2025-11-22 18:22:03,695 | INFO     | event service: False
[2025-11-22 13:22:38] 2025-11-22 18:22:03,695 | INFO     | sizes: {0: 2298750, 4: 2299012, 11: 2299040, 113604: 2376115, 113605: 2376142, 113613: 2385192, 113615: 2385376, 113638: 2385718}
[2025-11-22 13:22:38] 2025-11-22 18:22:03,695 | INFO     | --------------------------------------------------
[2025-11-22 13:22:38] 2025-11-22 18:22:03,695 | INFO     | 
[2025-11-22 13:22:38] 2025-11-22 18:22:03,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 13:22:38] 2025-11-22 18:22:03,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 13:22:38] 2025-11-22 18:22:03,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 13:22:38] 2025-11-22 18:22:03,772 | INFO     | job 6893876913 has completed (purged errors)
[2025-11-22 13:22:38] 2025-11-22 18:22:03,772 | INFO     | overall cleanup function is called
[2025-11-22 13:22:38] 2025-11-22 18:22:04,796 | INFO     | --- collectZombieJob: --- 10, [2994351]
[2025-11-22 13:22:38] 2025-11-22 18:22:04,796 | INFO     | zombie collector waiting for pid 2994351
[2025-11-22 13:22:38] 2025-11-22 18:22:04,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 13:22:38] 2025-11-22 18:22:04,797 | INFO     | collected zombie processes
[2025-11-22 13:22:38] 2025-11-22 18:22:04,797 | INFO     | will attempt to kill all subprocesses of pid=2994351
[2025-11-22 13:22:38] 2025-11-22 18:22:05,043 | INFO     | process IDs to be killed: [2994351] (in reverse order)
[2025-11-22 13:22:38] 2025-11-22 18:22:05,207 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 13:22:38] 2025-11-22 18:22:05,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 13:22:38] 2025-11-22 18:22:05,226 | INFO     | did not find any defunct processes belonging to 2994351
[2025-11-22 13:22:38] 2025-11-22 18:22:05,255 | INFO     | did not find any defunct processes belonging to 2994351
[2025-11-22 13:22:38] 2025-11-22 18:22:05,282 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 13:22:38] 2025-11-22 18:22:05,282 | INFO     | ready for new job
[2025-11-22 13:22:38] 2025-11-22 18:22:05,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 13:22:38] 2025-11-22 18:22:05,289 | INFO     | ***************************************
[2025-11-22 13:22:38] 2025-11-22 18:22:05,289 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 13:22:38] 2025-11-22 18:22:05,289 | INFO     | ***************************************
[2025-11-22 13:22:38] 2025-11-22 18:22:05,289 | INFO     | 
[2025-11-22 13:22:38] 2025-11-22 18:22:05,308 | INFO     | architecture information:
[2025-11-22 13:22:38] 2025-11-22 18:22:05,322 | INFO     | executing command: cat /etc/os-release
[2025-11-22 13:22:38] 2025-11-22 18:22:05,508 | INFO     | cat /etc/os-release:
[2025-11-22 13:22:38] NAME="CentOS Linux"
[2025-11-22 13:22:38] VERSION="7 (Core)"
[2025-11-22 13:22:38] ID="centos"
[2025-11-22 13:22:38] ID_LIKE="rhel fedora"
[2025-11-22 13:22:38] VERSION_ID="7"
[2025-11-22 13:22:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 13:22:38] ANSI_COLOR="0;31"
[2025-11-22 13:22:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 13:22:38] HOME_URL="https://www.centos.org/"
[2025-11-22 13:22:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 13:22:38] 
[2025-11-22 13:22:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 13:22:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 13:22:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 13:22:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 13:22:38] 
[2025-11-22 13:22:38] 2025-11-22 18:22:05,509 | INFO     | ***************************************
[2025-11-22 13:22:38] 2025-11-22 18:22:06,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 13:22:38] 2025-11-22 18:22:06,138 | INFO     | sufficient remaining disk space (50607423488 B)
[2025-11-22 13:22:38] 2025-11-22 18:22:06,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 13:22:38] 2025-11-22 18:22:06,139 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 13:22:38] 2025-11-22 18:22:06,139 | INFO     | update_server=False
[2025-11-22 13:22:38] 2025-11-22 18:22:06,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 13:22:38] 2025-11-22 18:22:06,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 13:22:38] 2025-11-22 18:22:06,532 | INFO     | all payload control threads have been joined
[2025-11-22 13:22:38] 2025-11-22 18:22:06,685 | INFO     | all data control threads have been joined
[2025-11-22 13:22:38] 2025-11-22 18:22:06,893 | INFO     | all job control threads have been joined
[2025-11-22 13:22:38] 2025-11-22 18:22:07,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 13:22:38] 2025-11-22 18:22:07,112 | INFO     | aborting loop
[2025-11-22 13:22:38] 2025-11-22 18:22:07,145 | INFO     | [job] retrieve thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,156 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,203 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,208 | INFO     | [job] validate thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,208 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,538 | INFO     | [payload] control thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,691 | INFO     | [data] control thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,706 | INFO     | [data] copytool_in thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:07,900 | INFO     | [job] control thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:08,118 | INFO     | [job] job monitor thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:08,147 | INFO     | [data] copytool_out thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:08,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 13:22:38] 2025-11-22 18:22:08,499 | INFO     | [payload] validate_post thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:08,554 | INFO     | [payload] failed_post thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:08,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 13:22:38] 2025-11-22 18:22:09,253 | INFO     | [job] queue monitor thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:12,594 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:16,526 | INFO     | job.realtimelogging is not enabled
[2025-11-22 13:22:38] 2025-11-22 18:22:17,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 13:22:38] 2025-11-22 18:22:19,574 | INFO     | [monitor] cgroup control has ended
[2025-11-22 13:22:38] 2025-11-22 18:22:20,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161306425152)>', '<ExcThread(monitor, started 140160679274240)>']
[2025-11-22 13:22:38] 2025-11-22 18:22:26,003 | INFO     | all workflow threads have been joined
[2025-11-22 13:22:38] 2025-11-22 18:22:26,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 13:22:38] 2025-11-22 18:22:26,004 | INFO     | traces error code: 0
[2025-11-22 13:22:38] 2025-11-22 18:22:26,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 13:22:38] 2025-11-22 18:22:36,109 | INFO     | PID=2987958 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 13:22:38] 2025-11-22 18:22:36,110 | INFO     | .. there are 7 such processes running
[2025-11-22 13:22:38] 2025-11-22 18:22:36,110 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 13:22:38] 2025-11-22 18:22:36,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 13:22:38] 2025-11-22 18:22:36,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 13:22:38] 2025-11-22 18:22:36,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 13:22:38] 2025-11-22 18:22:36,110 | INFO     | [monitor] control thread has ended
[2025-11-22 13:22:38] 2025-11-22 18:22:36,705 [wrapper] ==== pilot stdout END ====
[2025-11-22 13:22:38] 2025-11-22 18:22:36,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 13:22:38] 2025-11-22 18:22:36,712 [wrapper] pilotpid: 2987958
[2025-11-22 13:22:38] 2025-11-22 18:22:36,715 [wrapper] Pilot exit status: 0
[2025-11-22 13:22:38] 2025-11-22 18:22:36,852 [wrapper] pandaids: 6893876913
[2025-11-22 13:22:38] 2025-11-22 18:22:37,242 [wrapper] cleanup supervisor_pilot 1515126 2987959
[2025-11-22 13:22:38] 2025-11-22 18:22:37,280 [wrapper] Test setup, not cleaning
[2025-11-22 13:22:38] 2025-11-22 18:22:37,306 [wrapper] apfmon messages muted
[2025-11-22 13:22:38] 2025-11-22 18:22:37,371 [wrapper] ==== wrapper stdout END ====
[2025-11-22 13:22:38] 2025-11-22 18:22:37,404 [wrapper] ==== wrapper stderr END ====
[2025-11-22 13:22:38]  *** Error codes and diagnostics ***
[2025-11-22 13:22:38]     "exeErrorCode": 0,
[2025-11-22 13:22:38]     "exeErrorDiag": "",
[2025-11-22 13:22:38]     "pilotErrorCode": 0,
[2025-11-22 13:22:38]     "pilotErrorDiag": "",
[2025-11-22 13:22:38]  *** Listing of results directory ***
[2025-11-22 13:22:38] total 1334268
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 12:52 pilot3.tar.gz
[2025-11-22 13:22:38] -rwx------. 1 boincer umatlas     36292 Nov 20 13:01 runpilot2-wrapper.sh
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:01 queuedata.json
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas       100 Nov 21 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 13:22:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 05:47 run_atlas
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas       105 Nov 21 05:47 job.xml
[2025-11-22 13:22:38] -rw-r--r--. 2 boincer umatlas 408786750 Nov 21 05:47 EVNT.47493127._000784.pool.root.1
[2025-11-22 13:22:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 05:47 start_atlas.sh
[2025-11-22 13:22:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 05:47 shared
[2025-11-22 13:22:38] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 05:47 input.tar.gz
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas         0 Nov 21 05:47 boinc_lockfile
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas      2782 Nov 21 05:47 pandaJob.out
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas        57 Nov 21 05:47 setup.sh.local
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas    989817 Nov 21 05:47 agis_schedconf.cvmfs.json
[2025-11-22 13:22:38] drwx------. 5 boincer umatlas      4096 Nov 21 05:47 pilot3
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas       533 Nov 22 13:01 boinc_task_state.xml
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas 918948723 Nov 22 13:20 HITS.47523449._007831.pool.root.1
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas      1083 Nov 22 13:21 memory_monitor_summary.json
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas   1526164 Nov 22 13:21 agis_ddmendpoints.agis.ALL.json
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas   2756252 Nov 22 13:21 log.47523449._007831.job.log.tgz.1
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas        95 Nov 22 13:21 pilot_heartbeat.json
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas      6661 Nov 22 13:21 init_data.xml
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas      8683 Nov 22 13:22 heartbeat.json
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 13:22 boinc_mmap_file
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas        29 Nov 22 13:22 wrapper_checkpoint.txt
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas       822 Nov 22 13:22 pilotlog.txt
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas  14557953 Nov 22 13:22 log.47523449._007831.job.log.1
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas       353 Nov 22 13:22 output.list
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas       620 Nov 22 13:22 runtime_log
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas  17336320 Nov 22 13:22 result.tar.gz
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas       668 Nov 22 13:22 XXANDmd9Ng8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiwGKDmqjjYcn.diag
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas      9339 Nov 22 13:22 runtime_log.err
[2025-11-22 13:22:38] -rw-r--r--. 1 boincer umatlas     21152 Nov 22 13:22 stderr.txt
[2025-11-22 13:22:38] HITS file was successfully produced:
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas 918948723 Nov 22 13:20 shared/HITS.pool.root.1
[2025-11-22 13:22:38]  *** Contents of shared directory: ***
[2025-11-22 13:22:38] total 1314156
[2025-11-22 13:22:38] -rw-r--r--. 2 boincer umatlas 408786750 Nov 21 05:47 ATLAS.root_0
[2025-11-22 13:22:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 05:47 start_atlas.sh
[2025-11-22 13:22:38] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 05:47 input.tar.gz
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas 918948723 Nov 22 13:20 HITS.pool.root.1
[2025-11-22 13:22:38] -rw-------. 1 boincer umatlas  17336320 Nov 22 13:22 result.tar.gz
13:22:39 (2984288): run_atlas exited; CPU time 306431.347856
13:22:39 (2984288): called boinc_finish(0)

</stderr_txt>
]]>

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