Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:47 (2795902): wrapper (7.7.26015): starting
00:02:47 (2795902): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:02:47] Arguments: --nthreads 9
[2025-11-21 00:02:47] Threads: 9
[2025-11-21 00:02:47] Checking for CVMFS
[2025-11-21 00:02:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:02:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:02:48] 2.13.2.0 5239 26092 166464 153108 3 166 25702679 39288832 5519 16776704 0 14422695 99.654 12388425 34274 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:02:48] CVMFS is ok
[2025-11-21 00:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:02:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:02:48] Further information can be found at the LHC@home message board.
[2025-11-21 00:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:02:48] Checking for apptainer binary...
[2025-11-21 00:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:02:48] Running /usr/bin/apptainer --version
[2025-11-21 00:02:48] apptainer version 1.4.4-1.el9
[2025-11-21 00:02:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:02:48] c-210-6.aglt2.org
[2025-11-21 00:02:48] apptainer works
[2025-11-21 00:02:48] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:02:48] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:02:48] Starting ATLAS job with PandaID=6893860094
[2025-11-21 00:02:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:11:29]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:11:29] 2025-11-21 17:10:38,821 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 12:11:29] 2025-11-21 17:10:38,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 12:11:29] 2025-11-21 17:10:38,857 | INFO     | fitting pss+swap vs Time
[2025-11-21 12:11:29] 2025-11-21 17:10:38,858 | INFO     | sum of square deviations: 113340113788.9649
[2025-11-21 12:11:29] 2025-11-21 17:10:38,881 | INFO     | sum of deviations: 1333610912615.9028
[2025-11-21 12:11:29] 2025-11-21 17:10:38,881 | INFO     | mean x: 1763723223.0839162
[2025-11-21 12:11:29] 2025-11-21 17:10:38,881 | INFO     | mean y: 3041194.434965035
[2025-11-21 12:11:29] 2025-11-21 17:10:38,882 | INFO     | intersect: -20749721958.056347
[2025-11-21 12:11:29] 2025-11-21 17:10:38,888 | INFO     | chi2: 8.0523173984632
[2025-11-21 12:11:29] 2025-11-21 17:10:38,889 | INFO     | sum of square deviations: 110979105885.549
[2025-11-21 12:11:29] 2025-11-21 17:10:38,969 | INFO     | sum of deviations: 1602732754192.4346
[2025-11-21 12:11:29] 2025-11-21 17:10:38,969 | INFO     | mean x: 1763723070.5915494
[2025-11-21 12:11:29] 2025-11-21 17:10:38,969 | INFO     | mean y: 3058574.4394366196
[2025-11-21 12:11:29] 2025-11-21 17:10:38,969 | INFO     | intersect: -25468193081.499672
[2025-11-21 12:11:29] 2025-11-21 17:10:38,970 | INFO     | chi2: 4.480866876511442
[2025-11-21 12:11:29] 2025-11-21 17:10:38,970 | INFO     | current chi2=4.480866876511442 (change=44.35307682523017 %)
[2025-11-21 12:11:29] 2025-11-21 17:10:38,972 | INFO     | sum of square deviations: 108651078670.247
[2025-11-21 12:11:29] 2025-11-21 17:10:38,985 | INFO     | sum of deviations: 1751587293549.6355
[2025-11-21 12:11:29] 2025-11-21 17:10:38,986 | INFO     | mean x: 1763722918.0978723
[2025-11-21 12:11:29] 2025-11-21 17:10:38,986 | INFO     | mean y: 3068307.889361702
[2025-11-21 12:11:29] 2025-11-21 17:10:38,986 | INFO     | intersect: -28430286339.77596
[2025-11-21 12:11:29] 2025-11-21 17:10:38,987 | INFO     | chi2: 3.0183338669346504
[2025-11-21 12:11:29] 2025-11-21 17:10:38,988 | INFO     | current chi2=3.0183338669346504 (change=32.639510386781225 %)
[2025-11-21 12:11:29] 2025-11-21 17:10:38,988 | INFO     | sum of square deviations: 106355541734.77704
[2025-11-21 12:11:29] 2025-11-21 17:10:39,001 | INFO     | sum of deviations: 1735589745362.8647
[2025-11-21 12:11:29] 2025-11-21 17:10:39,002 | INFO     | mean x: 1763722765.5942857
[2025-11-21 12:11:29] 2025-11-21 17:10:39,002 | INFO     | mean y: 3067240.3657142855
[2025-11-21 12:11:29] 2025-11-21 17:10:39,002 | INFO     | intersect: -28778687764.578518
[2025-11-21 12:11:29] 2025-11-21 17:10:39,003 | INFO     | chi2: 2.9817055217349266
[2025-11-21 12:11:29] 2025-11-21 17:10:39,003 | INFO     | current chi2=2.9817055217349266 (change=1.2135286159354761 %)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,003 | INFO     | right removable region: 699
[2025-11-21 12:11:29] 2025-11-21 17:10:39,004 | INFO     | sum of square deviations: 110978633135.54907
[2025-11-21 12:11:29] 2025-11-21 17:10:39,018 | INFO     | sum of deviations: 1085929401151.972
[2025-11-21 12:11:29] 2025-11-21 17:10:39,018 | INFO     | mean x: 1763723375.5915494
[2025-11-21 12:11:29] 2025-11-21 17:10:39,018 | INFO     | mean y: 3057175.761971831
[2025-11-21 12:11:29] 2025-11-21 17:10:39,018 | INFO     | intersect: -17255031295.32731
[2025-11-21 12:11:29] 2025-11-21 17:10:39,019 | INFO     | chi2: 5.283635272184953
[2025-11-21 12:11:29] 2025-11-21 17:10:39,019 | INFO     | current chi2=5.283635272184953 (change=34.38366856734504 %)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,021 | INFO     | sum of square deviations: 108650479897.37021
[2025-11-21 12:11:29] 2025-11-21 17:10:39,034 | INFO     | sum of deviations: 1023653167197.6387
[2025-11-21 12:11:29] 2025-11-21 17:10:39,034 | INFO     | mean x: 1763723528.0893617
[2025-11-21 12:11:29] 2025-11-21 17:10:39,034 | INFO     | mean y: 3061255.418439716
[2025-11-21 12:11:29] 2025-11-21 17:10:39,034 | INFO     | intersect: -16613903320.302385
[2025-11-21 12:11:29] 2025-11-21 17:10:39,035 | INFO     | chi2: 5.21668607036932
[2025-11-21 12:11:29] 2025-11-21 17:10:39,035 | INFO     | current chi2=5.21668607036932 (change=1.2671049072610787 %)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,035 | INFO     | left removable region: 20
[2025-11-21 12:11:29] 2025-11-21 17:10:39,037 | INFO     | sum of square deviations: 97067406673.1914
[2025-11-21 12:11:29] 2025-11-21 17:10:39,048 | INFO     | sum of deviations: 1325370822005.1511
[2025-11-21 12:11:29] 2025-11-21 17:10:39,048 | INFO     | mean x: 1763723345.1001472
[2025-11-21 12:11:29] 2025-11-21 17:10:39,048 | INFO     | mean y: 3094494.497790869
[2025-11-21 12:11:29] 2025-11-21 17:10:39,049 | INFO     | intersect: -24079010300.526722
[2025-11-21 12:11:29] 2025-11-21 17:10:39,050 | INFO     | chi2: 0.04860423234613139
[2025-11-21 12:11:29] 2025-11-21 17:10:39,050 | INFO     | current memory leak: 13.65 B/s (using 679 data points, chi2=0.05)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | ..............................
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . Timing measurements:
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . get job = 0 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . initial setup = 3 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . payload setup = 12 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . stage-in = 0 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . payload execution = 43566 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,051 | INFO     | . stage-out = 7 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,052 | INFO     | . log creation = 1 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,052 | INFO     | ..............................
[2025-11-21 12:11:29] 2025-11-21 17:10:39,245 | INFO     | 
[2025-11-21 12:11:29] 2025-11-21 17:10:39,245 | INFO     | job summary report
[2025-11-21 12:11:29] 2025-11-21 17:10:39,245 | INFO     | --------------------------------------------------
[2025-11-21 12:11:29] 2025-11-21 17:10:39,245 | INFO     | PanDA job id: 6893860094
[2025-11-21 12:11:29] 2025-11-21 17:10:39,245 | INFO     | task id: 47523449
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | errors: (none)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | pilot state: finished 
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | transexitcode: 0
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | exeerrorcode: 0
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | exeerrordiag: 
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | exitcode: 0
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | exitmsg: OK
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | cpuconsumptiontime: 291273 s
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | nevents: 1000
[2025-11-21 12:11:29] 2025-11-21 17:10:39,246 | INFO     | neventsw: 0
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | pid: 2807299
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | pgrp: 2807299
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | corecount: 9
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | event service: False
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | sizes: {0: 2298635, 1: 2298834, 12: 2299096, 23: 2299124, 43583: 2344626, 43584: 2344625, 43592: 2353831, 43593: 2353887, 43618: 2354133}
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | --------------------------------------------------
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | 
[2025-11-21 12:11:29] 2025-11-21 17:10:39,247 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 12:11:29] 2025-11-21 17:10:39,311 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:11:29] 2025-11-21 17:10:39,314 | INFO     | job 6893860094 has completed (purged errors)
[2025-11-21 12:11:29] 2025-11-21 17:10:39,314 | INFO     | overall cleanup function is called
[2025-11-21 12:11:29] 2025-11-21 17:10:40,350 | INFO     | --- collectZombieJob: --- 10, [2807299]
[2025-11-21 12:11:29] 2025-11-21 17:10:40,350 | INFO     | zombie collector waiting for pid 2807299
[2025-11-21 12:11:29] 2025-11-21 17:10:40,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:11:29] 2025-11-21 17:10:40,350 | INFO     | collected zombie processes
[2025-11-21 12:11:29] 2025-11-21 17:10:40,351 | INFO     | will attempt to kill all subprocesses of pid=2807299
[2025-11-21 12:11:29] 2025-11-21 17:10:40,766 | INFO     | process IDs to be killed: [2807299] (in reverse order)
[2025-11-21 12:11:29] 2025-11-21 17:10:40,885 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:11:29] 2025-11-21 17:10:40,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:11:29] 2025-11-21 17:10:40,905 | INFO     | did not find any defunct processes belonging to 2807299
[2025-11-21 12:11:29] 2025-11-21 17:10:40,946 | INFO     | did not find any defunct processes belonging to 2807299
[2025-11-21 12:11:29] 2025-11-21 17:10:40,947 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:11:29] 2025-11-21 17:10:40,947 | INFO     | ready for new job
[2025-11-21 12:11:29] 2025-11-21 17:10:40,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:11:29] 2025-11-21 17:10:40,951 | INFO     | ***************************************
[2025-11-21 12:11:29] 2025-11-21 17:10:40,951 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:11:29] 2025-11-21 17:10:40,951 | INFO     | ***************************************
[2025-11-21 12:11:29] 2025-11-21 17:10:40,951 | INFO     | 
[2025-11-21 12:11:29] 2025-11-21 17:10:40,956 | INFO     | architecture information:
[2025-11-21 12:11:29] 2025-11-21 17:10:40,958 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:11:29] 2025-11-21 17:10:41,005 | INFO     | cat /etc/os-release:
[2025-11-21 12:11:29] NAME="CentOS Linux"
[2025-11-21 12:11:29] VERSION="7 (Core)"
[2025-11-21 12:11:29] ID="centos"
[2025-11-21 12:11:29] ID_LIKE="rhel fedora"
[2025-11-21 12:11:29] VERSION_ID="7"
[2025-11-21 12:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:11:29] ANSI_COLOR="0;31"
[2025-11-21 12:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:11:29] HOME_URL="https://www.centos.org/"
[2025-11-21 12:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:11:29] 
[2025-11-21 12:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:11:29] 
[2025-11-21 12:11:29] 2025-11-21 17:10:41,006 | INFO     | ***************************************
[2025-11-21 12:11:29] 2025-11-21 17:10:41,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 12:11:29] 2025-11-21 17:10:41,559 | INFO     | sufficient remaining disk space (47343206400 B)
[2025-11-21 12:11:29] 2025-11-21 17:10:41,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:11:29] 2025-11-21 17:10:41,560 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:11:29] 2025-11-21 17:10:41,560 | INFO     | update_server=False
[2025-11-21 12:11:29] 2025-11-21 17:10:41,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:11:29] 2025-11-21 17:10:41,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:11:29] 2025-11-21 17:10:42,038 | INFO     | all data control threads have been joined
[2025-11-21 12:11:29] 2025-11-21 17:10:42,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:11:29] 2025-11-21 17:10:42,183 | INFO     | aborting loop
[2025-11-21 12:11:29] 2025-11-21 17:10:42,314 | INFO     | all job control threads have been joined
[2025-11-21 12:11:29] 2025-11-21 17:10:42,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:11:29] 2025-11-21 17:10:42,561 | INFO     | all payload control threads have been joined
[2025-11-21 12:11:29] 2025-11-21 17:10:42,566 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:42,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,044 | INFO     | [data] control thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,189 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,320 | INFO     | [job] control thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,398 | INFO     | [job] validate thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,478 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,553 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,567 | INFO     | [payload] control thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,568 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,571 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,658 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:43,877 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:44,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:11:29] 2025-11-21 17:10:45,195 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:10:46,379 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:11:29] 2025-11-21 17:11:11,392 | INFO     | PID=2800366 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:11:29] 2025-11-21 17:11:11,393 | INFO     | .. there are 10 such processes running
[2025-11-21 12:11:29] 2025-11-21 17:11:11,393 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:11:29] 2025-11-21 17:11:11,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:11:29] 2025-11-21 17:11:11,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:11:29] 2025-11-21 17:11:22,791 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:11:29] 2025-11-21 17:11:23,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422945621824)>', '<ExcThread(monitor, started 140422454167296)>']
[2025-11-21 12:11:29] 2025-11-21 17:11:24,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:11:29] 2025-11-21 17:11:24,479 | INFO     | [monitor] control thread has ended
[2025-11-21 12:11:29] 2025-11-21 17:11:28,992 | INFO     | all workflow threads have been joined
[2025-11-21 12:11:29] 2025-11-21 17:11:28,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:11:29] 2025-11-21 17:11:28,992 | INFO     | traces error code: 0
[2025-11-21 12:11:29] 2025-11-21 17:11:28,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:11:29] 2025-11-21 17:11:29,332 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:11:29] 2025-11-21 17:11:29,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:11:29] 2025-11-21 17:11:29,386 [wrapper] pilotpid: 2800366
[2025-11-21 12:11:29] 2025-11-21 17:11:29,407 [wrapper] Pilot exit status: 0
[2025-11-21 12:11:29] 2025-11-21 17:11:29,466 [wrapper] pandaids: 6893860094
[2025-11-21 12:11:29] 2025-11-21 17:11:29,591 [wrapper] cleanup supervisor_pilot 3835771 2800367
[2025-11-21 12:11:29] 2025-11-21 17:11:29,595 [wrapper] Test setup, not cleaning
[2025-11-21 12:11:29] 2025-11-21 17:11:29,598 [wrapper] apfmon messages muted
[2025-11-21 12:11:29] 2025-11-21 17:11:29,601 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:11:29] 2025-11-21 17:11:29,603 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:11:29]  *** Error codes and diagnostics ***
[2025-11-21 12:11:29]     "exeErrorCode": 0,
[2025-11-21 12:11:29]     "exeErrorDiag": "",
[2025-11-21 12:11:29]     "pilotErrorCode": 0,
[2025-11-21 12:11:29]     "pilotErrorDiag": "",
[2025-11-21 12:11:29]  *** Listing of results directory ***
[2025-11-21 12:11:29] total 1318208
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:37 queuedata.json
[2025-11-21 12:11:29] -rwx------. 1 boincer umatlas     36292 Nov 20 08:39 runpilot2-wrapper.sh
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:11:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:02 run_atlas
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:02 job.xml
[2025-11-21 12:11:29] -rw-r--r--. 2 boincer umatlas 411374966 Nov 21 00:02 EVNT.47493127._000544.pool.root.1
[2025-11-21 12:11:29] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 00:02 input.tar.gz
[2025-11-21 12:11:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:02 start_atlas.sh
[2025-11-21 12:11:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:02 shared
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:02 boinc_lockfile
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:02 pandaJob.out
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas        57 Nov 21 00:02 setup.sh.local
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas    989817 Nov 21 00:03 agis_schedconf.cvmfs.json
[2025-11-21 12:11:29] drwx------. 5 boincer umatlas      4096 Nov 21 00:03 pilot3
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas       533 Nov 21 11:58 boinc_task_state.xml
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas 918316313 Nov 21 12:09 HITS.47523449._005433.pool.root.1
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas      1053 Nov 21 12:10 memory_monitor_summary.json
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas   1526164 Nov 21 12:10 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas   2076177 Nov 21 12:10 log.47523449._005433.job.log.tgz.1
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas        95 Nov 21 12:10 pilot_heartbeat.json
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas      6660 Nov 21 12:10 init_data.xml
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas      8623 Nov 21 12:10 heartbeat.json
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas        29 Nov 21 12:11 wrapper_checkpoint.txt
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas      4824 Nov 21 12:11 pilotlog.txt
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 12:11 boinc_mmap_file
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas   6039208 Nov 21 12:11 log.47523449._005433.job.log.1
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas       353 Nov 21 12:11 output.list
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas       620 Nov 21 12:11 runtime_log
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas   8130560 Nov 21 12:11 result.tar.gz
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 12:11 runtime_log.err
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas       659 Nov 21 12:11 1ErLDmR3Jg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXyHKDmdvoTVo.diag
[2025-11-21 12:11:29] -rw-r--r--. 1 boincer umatlas     21146 Nov 21 12:11 stderr.txt
[2025-11-21 12:11:29] HITS file was successfully produced:
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas 918316313 Nov 21 12:09 shared/HITS.pool.root.1
[2025-11-21 12:11:29]  *** Contents of shared directory: ***
[2025-11-21 12:11:29] total 1307076
[2025-11-21 12:11:29] -rw-r--r--. 2 boincer umatlas 411374966 Nov 21 00:02 ATLAS.root_0
[2025-11-21 12:11:29] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 00:02 input.tar.gz
[2025-11-21 12:11:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:02 start_atlas.sh
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas 918316313 Nov 21 12:09 HITS.pool.root.1
[2025-11-21 12:11:29] -rw-------. 1 boincer umatlas   8130560 Nov 21 12:11 result.tar.gz
12:11:52 (2795902): run_atlas exited; CPU time 291670.557606
12:11:52 (2795902): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN