Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:17:11 (1007770): wrapper (7.7.26015): starting
00:17:11 (1007770): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:17:11] Arguments: --nthreads 9
[2025-11-21 00:17:11] Threads: 9
[2025-11-21 00:17:11] Checking for CVMFS
[2025-11-21 00:17:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:17:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:17:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:17:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:17:12] 2.13.2.0 3108276 22537 187960 153109 0 57 23493548 39288833 6906 16776704 0 11390325 99.480 15318494 37863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:17:12] CVMFS is ok
[2025-11-21 00:17:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:17:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:17:12] Further information can be found at the LHC@home message board.
[2025-11-21 00:17:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:17:12] Checking for apptainer binary...
[2025-11-21 00:17:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:17:12] Running /usr/bin/apptainer --version
[2025-11-21 00:17:12] apptainer version 1.4.4-1.el9
[2025-11-21 00:17:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:17:13] c-211-32.aglt2.org
[2025-11-21 00:17:13] apptainer works
[2025-11-21 00:17:13] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:17:13] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:17:13] Starting ATLAS job with PandaID=6893861644
[2025-11-21 00:17:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:20:57]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:20:57] 2025-11-23 00:19:31,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:20:57] 2025-11-23 00:19:31,616 | INFO     | time since job start (154853s) is within the limit (172800.0s)
[2025-11-22 19:20:57] 2025-11-23 00:19:33,623 | INFO     | time since job start (154855s) is within the limit (172800.0s)
[2025-11-22 19:20:57] 2025-11-23 00:19:33,684 | INFO     | monitor loop #9045: job 0:6893861644 is in state 'finished'
[2025-11-22 19:20:57] 2025-11-23 00:19:33,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:20:57] 2025-11-23 00:19:35,818 | INFO     | PID=1012855 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-22 19:20:57] 2025-11-23 00:19:35,820 | INFO     | .. there are 9 such processes running
[2025-11-22 19:20:57] 2025-11-23 00:19:36,251 | INFO     | monitor loop #9046: job 0:6893861644 is in state 'finished'
[2025-11-22 19:20:57] 2025-11-23 00:19:36,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:20:57] 2025-11-23 00:19:36,824 | INFO     | time since job start (154858s) is within the limit (172800.0s)
[2025-11-22 19:20:57] 2025-11-23 00:19:38,757 | INFO     | monitor loop #9047: job 0:6893861644 is in state 'finished'
[2025-11-22 19:20:57] 2025-11-23 00:19:38,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:20:57] 2025-11-23 00:19:38,831 | INFO     | time since job start (154860s) is within the limit (172800.0s)
[2025-11-22 19:20:57] 2025-11-23 00:19:40,838 | INFO     | time since job start (154862s) is within the limit (172800.0s)
[2025-11-22 19:20:57] 2025-11-23 00:19:41,266 | INFO     | monitor loop #9048: job 0:6893861644 is in state 'finished'
[2025-11-22 19:20:57] 2025-11-23 00:19:41,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:20:57] 2025-11-23 00:19:42,683 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 19:20:57] 2025-11-23 00:19:42,700 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9947250000014
[2025-11-22 19:20:57] 2025-11-23 00:19:42,712 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893861644/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:20:57] 2025-11-23 00:19:42,717 | INFO     | extracted standard info from prmon json
[2025-11-22 19:20:57] 2025-11-23 00:19:42,717 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:20:57] 2025-11-23 00:19:42,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:20:57] 2025-11-23 00:19:42,807 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:20:57] 2025-11-23 00:19:42,811 | INFO     | sum of square deviations: 5057551265111.467
[2025-11-22 19:20:57] 2025-11-23 00:19:42,868 | INFO     | time since job start (154864s) is within the limit (172800.0s)
[2025-11-22 19:20:57] 2025-11-23 00:19:43,128 | INFO     | sum of deviations: 18797998809279.375
[2025-11-22 19:20:57] 2025-11-23 00:19:43,133 | INFO     | mean x: 1763779820.317429
[2025-11-22 19:20:57] 2025-11-23 00:19:43,133 | INFO     | mean y: 3188379.116324921
[2025-11-22 19:20:57] 2025-11-23 00:19:43,133 | INFO     | intersect: -6552460634.443853
[2025-11-22 19:20:57] 2025-11-23 00:19:43,141 | INFO     | chi2: 18.785341737880344
[2025-11-22 19:20:57] 2025-11-23 00:19:43,148 | INFO     | sum of square deviations: 5027700366300.201
[2025-11-22 19:20:57] 2025-11-23 00:19:43,392 | INFO     | sum of deviations: 19795080079783.105
[2025-11-22 19:20:57] 2025-11-23 00:19:43,392 | INFO     | mean x: 1763779667.8269458
[2025-11-22 19:20:57] 2025-11-23 00:19:43,393 | INFO     | mean y: 3193472.429474516
[2025-11-22 19:20:57] 2025-11-23 00:19:43,393 | INFO     | intersect: -6941166219.677708
[2025-11-22 19:20:57] 2025-11-23 00:19:43,396 | INFO     | chi2: 15.312608014879086
[2025-11-22 19:20:57] 2025-11-23 00:19:43,396 | INFO     | current chi2=15.312608014879086 (change=18.486401639415195 %)
[2025-11-22 19:20:57] 2025-11-23 00:19:43,396 | INFO     | right removable region: 2530
[2025-11-22 19:20:57] 2025-11-23 00:19:43,400 | INFO     | sum of square deviations: 5027692913930.195
[2025-11-22 19:20:57] 2025-11-23 00:19:43,607 | INFO     | sum of deviations: 17646554098648.145
[2025-11-22 19:20:57] 2025-11-23 00:19:43,607 | INFO     | mean x: 1763779972.8269458
[2025-11-22 19:20:57] 2025-11-23 00:19:43,607 | INFO     | mean y: 3194260.1351244566
[2025-11-22 19:20:57] 2025-11-23 00:19:43,608 | INFO     | intersect: -6187446107.411196
[2025-11-22 19:20:57] 2025-11-23 00:19:43,611 | INFO     | chi2: 14.439336204578483
[2025-11-22 19:20:57] 2025-11-23 00:19:43,611 | INFO     | current chi2=14.439336204578483 (change=23.135089017508847 %)
[2025-11-22 19:20:57] 2025-11-23 00:19:43,611 | INFO     | left removable region: 10
[2025-11-22 19:20:57] 2025-11-23 00:19:43,615 | INFO     | sum of square deviations: 4962427696203.477
[2025-11-22 19:20:57] 2025-11-23 00:19:43,788 | INFO     | sum of deviations: 17818600193573.09
[2025-11-22 19:20:57] 2025-11-23 00:19:43,788 | INFO     | mean x: 1763779942.347619
[2025-11-22 19:20:57] 2025-11-23 00:19:43,788 | INFO     | mean y: 3205488.3126984127
[2025-11-22 19:20:57] 2025-11-23 00:19:43,789 | INFO     | intersect: -6330003083.407105
[2025-11-22 19:20:57] 2025-11-23 00:19:43,792 | INFO     | chi2: 7.150096351931256
[2025-11-22 19:20:57] 2025-11-23 00:19:43,793 | INFO     | current memory leak: 3.59 B/s (using 2520 data points, chi2=7.15)
[2025-11-22 19:20:57] 2025-11-23 00:19:43,794 | INFO     | could have reported an average CPU frequency of 2900 MHz (87 samples)
[2025-11-22 19:20:57] 2025-11-23 00:19:43,795 | INFO     | ..............................
[2025-11-22 19:20:57] 2025-11-23 00:19:43,795 | INFO     | . Timing measurements:
[2025-11-22 19:20:57] 2025-11-23 00:19:43,795 | INFO     | . get job = 1 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,795 | INFO     | . initial setup = 9 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,795 | INFO     | . payload setup = 52 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,796 | INFO     | . stage-in = 0 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,796 | INFO     | . payload execution = 154696 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,796 | INFO     | . stage-out = 6 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,796 | INFO     | . log creation = 1 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,796 | INFO     | ..............................
[2025-11-22 19:20:57] 2025-11-23 00:19:43,948 | INFO     | 
[2025-11-22 19:20:57] 2025-11-23 00:19:43,949 | INFO     | job summary report
[2025-11-22 19:20:57] 2025-11-23 00:19:43,949 | INFO     | --------------------------------------------------
[2025-11-22 19:20:57] 2025-11-23 00:19:43,949 | INFO     | PanDA job id: 6893861644
[2025-11-22 19:20:57] 2025-11-23 00:19:43,949 | INFO     | task id: 47523449
[2025-11-22 19:20:57] 2025-11-23 00:19:43,949 | INFO     | errors: (none)
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | pilot state: finished 
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | transexitcode: 0
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | exeerrorcode: 0
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | exeerrordiag: 
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | exitcode: 0
[2025-11-22 19:20:57] 2025-11-23 00:19:43,950 | INFO     | exitmsg: OK
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | cpuconsumptiontime: 474531 s
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | nevents: 1000
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | neventsw: 0
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | pid: 1022379
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | pgrp: 1022379
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | corecount: 9
[2025-11-22 19:20:57] 2025-11-23 00:19:43,951 | INFO     | event service: False
[2025-11-22 19:20:57] 2025-11-23 00:19:43,952 | INFO     | sizes: {0: 2298580, 1: 2298664, 2: 2298863, 3: 2298863, 14: 2298891, 25: 2298919, 36: 2299075, 38: 2299365, 47: 2299393, 154752: 2394972, 154753: 2394971, 154759: 
[2025-11-22 19:20:57] 2025-11-23 00:19:43,952 | INFO     | --------------------------------------------------
[2025-11-22 19:20:57] 2025-11-23 00:19:43,952 | INFO     | 
[2025-11-22 19:20:57] 2025-11-23 00:19:43,952 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 19:20:57] 2025-11-23 00:19:44,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:20:57] 2025-11-23 00:19:44,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:20:57] 2025-11-23 00:19:44,045 | INFO     | job 6893861644 has completed (purged errors)
[2025-11-22 19:20:57] 2025-11-23 00:19:44,049 | INFO     | overall cleanup function is called
[2025-11-22 19:20:57] 2025-11-23 00:19:45,084 | INFO     | --- collectZombieJob: --- 10, [1022379]
[2025-11-22 19:20:57] 2025-11-23 00:19:45,085 | INFO     | zombie collector waiting for pid 1022379
[2025-11-22 19:20:57] 2025-11-23 00:19:45,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:20:57] 2025-11-23 00:19:45,085 | INFO     | collected zombie processes
[2025-11-22 19:20:57] 2025-11-23 00:19:45,085 | INFO     | will attempt to kill all subprocesses of pid=1022379
[2025-11-22 19:20:57] 2025-11-23 00:19:45,807 | INFO     | process IDs to be killed: [1022379] (in reverse order)
[2025-11-22 19:20:57] 2025-11-23 00:19:45,950 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:20:57] 2025-11-23 00:19:45,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:20:57] 2025-11-23 00:19:45,973 | INFO     | did not find any defunct processes belonging to 1022379
[2025-11-22 19:20:57] 2025-11-23 00:19:45,987 | INFO     | did not find any defunct processes belonging to 1022379
[2025-11-22 19:20:57] 2025-11-23 00:19:45,990 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:20:57] 2025-11-23 00:19:45,990 | INFO     | ready for new job
[2025-11-22 19:20:57] 2025-11-23 00:19:45,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:20:57] 2025-11-23 00:19:46,001 | INFO     | ***************************************
[2025-11-22 19:20:57] 2025-11-23 00:19:46,002 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:20:57] 2025-11-23 00:19:46,002 | INFO     | ***************************************
[2025-11-22 19:20:57] 2025-11-23 00:19:46,002 | INFO     | 
[2025-11-22 19:20:57] 2025-11-23 00:19:46,004 | INFO     | architecture information:
[2025-11-22 19:20:57] 2025-11-23 00:19:46,005 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:20:57] 2025-11-23 00:19:46,050 | INFO     | cat /etc/os-release:
[2025-11-22 19:20:57] NAME="CentOS Linux"
[2025-11-22 19:20:57] VERSION="7 (Core)"
[2025-11-22 19:20:57] ID="centos"
[2025-11-22 19:20:57] ID_LIKE="rhel fedora"
[2025-11-22 19:20:57] VERSION_ID="7"
[2025-11-22 19:20:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:20:57] ANSI_COLOR="0;31"
[2025-11-22 19:20:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:20:57] HOME_URL="https://www.centos.org/"
[2025-11-22 19:20:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:20:57] 
[2025-11-22 19:20:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:20:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:20:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:20:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:20:57] 
[2025-11-22 19:20:57] 2025-11-23 00:19:46,050 | INFO     | ***************************************
[2025-11-22 19:20:57] 2025-11-23 00:19:46,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 19:20:57] 2025-11-23 00:19:46,592 | INFO     | sufficient remaining disk space (48520757248 B)
[2025-11-22 19:20:57] 2025-11-23 00:19:46,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:20:57] 2025-11-23 00:19:46,593 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:20:57] 2025-11-23 00:19:46,593 | INFO     | update_server=False
[2025-11-22 19:20:57] 2025-11-23 00:19:46,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:20:57] 2025-11-23 00:19:46,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:20:57] 2025-11-23 00:19:46,775 | INFO     | all payload control threads have been joined
[2025-11-22 19:20:57] 2025-11-23 00:19:47,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:20:57] 2025-11-23 00:19:47,325 | INFO     | aborting loop
[2025-11-22 19:20:57] 2025-11-23 00:19:47,503 | INFO     | all data control threads have been joined
[2025-11-22 19:20:57] 2025-11-23 00:19:47,598 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:47,778 | INFO     | all job control threads have been joined
[2025-11-22 19:20:57] 2025-11-23 00:19:47,781 | INFO     | [payload] control thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:47,984 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,002 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:20:57] 2025-11-23 00:19:48,332 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,382 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,385 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,508 | INFO     | [data] control thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,604 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,618 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,643 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,785 | INFO     | [job] control thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:48,973 | INFO     | [job] validate thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:49,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:20:57] 2025-11-23 00:19:50,008 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:19:52,117 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:20:57] 2025-11-23 00:20:16,727 | INFO     | PID=1012855 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 19:20:57] 2025-11-23 00:20:16,727 | INFO     | .. there are 9 such processes running
[2025-11-22 19:20:57] 2025-11-23 00:20:16,728 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:20:57] 2025-11-23 00:20:16,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:20:57] 2025-11-23 00:20:16,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:20:57] 2025-11-23 00:20:29,082 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:20:57] 2025-11-23 00:20:30,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081538963264)>', '<ExcThread(monitor, started 140080777762560)>']
[2025-11-22 19:20:57] 2025-11-23 00:20:30,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:20:57] 2025-11-23 00:20:30,826 | INFO     | [monitor] control thread has ended
[2025-11-22 19:20:57] 2025-11-23 00:20:35,807 | INFO     | all workflow threads have been joined
[2025-11-22 19:20:57] 2025-11-23 00:20:35,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:20:57] 2025-11-23 00:20:35,808 | INFO     | traces error code: 0
[2025-11-22 19:20:57] 2025-11-23 00:20:35,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:20:57] 2025-11-23 00:20:36,349 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:20:57] 2025-11-23 00:20:36,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:20:57] 2025-11-23 00:20:36,400 [wrapper] pilotpid: 1012855
[2025-11-22 19:20:57] 2025-11-23 00:20:36,428 [wrapper] Pilot exit status: 0
[2025-11-22 19:20:57] 2025-11-23 00:20:36,539 [wrapper] pandaids: 6893861644
[2025-11-22 19:20:57] 2025-11-23 00:20:36,819 [wrapper] cleanup supervisor_pilot  177552 1012856
[2025-11-22 19:20:57] 2025-11-23 00:20:36,835 [wrapper] Test setup, not cleaning
[2025-11-22 19:20:57] 2025-11-23 00:20:36,871 [wrapper] apfmon messages muted
[2025-11-22 19:20:57] 2025-11-23 00:20:36,890 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:20:57] 2025-11-23 00:20:36,909 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:20:57]  *** Error codes and diagnostics ***
[2025-11-22 19:20:57]     "exeErrorCode": 0,
[2025-11-22 19:20:57]     "exeErrorDiag": "",
[2025-11-22 19:20:57]     "pilotErrorCode": 0,
[2025-11-22 19:20:57]     "pilotErrorDiag": "",
[2025-11-22 19:20:57]  *** Listing of results directory ***
[2025-11-22 19:20:57] total 1353020
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:04 queuedata.json
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:04 pilot3.tar.gz
[2025-11-22 19:20:57] -rwx------. 1 boincer umatlas     36292 Nov 20 09:05 runpilot2-wrapper.sh
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:20:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:17 run_atlas
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:17 job.xml
[2025-11-22 19:20:57] -rw-r--r--. 2 boincer umatlas 408429932 Nov 21 00:17 EVNT.47493127._000581.pool.root.1
[2025-11-22 19:20:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:17 start_atlas.sh
[2025-11-22 19:20:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:17 shared
[2025-11-22 19:20:57] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 00:17 input.tar.gz
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:17 boinc_lockfile
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 00:17 pandaJob.out
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas        57 Nov 21 00:17 setup.sh.local
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas    989817 Nov 21 00:18 agis_schedconf.cvmfs.json
[2025-11-22 19:20:57] drwx------. 5 boincer umatlas      4096 Nov 21 00:18 pilot3
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas       534 Nov 22 19:01 boinc_task_state.xml
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas 927974421 Nov 22 19:18 HITS.47523449._005807.pool.root.1
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas      1059 Nov 22 19:19 memory_monitor_summary.json
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas   1526164 Nov 22 19:19 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas   3351217 Nov 22 19:19 log.47523449._005807.job.log.tgz.1
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas        95 Nov 22 19:19 pilot_heartbeat.json
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas      6525 Nov 22 19:19 init_data.xml
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas      8621 Nov 22 19:19 heartbeat.json
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas      4823 Nov 22 19:20 pilotlog.txt
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas  19225272 Nov 22 19:20 log.47523449._005807.job.log.1
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas       353 Nov 22 19:20 output.list
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas       620 Nov 22 19:20 runtime_log
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas  22599680 Nov 22 19:20 result.tar.gz
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas      9344 Nov 22 19:20 runtime_log.err
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas       663 Nov 22 19:20 QwNKDmNTKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmu1HKDmbcxVjm.diag
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 19:20 boinc_mmap_file
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas        30 Nov 22 19:20 wrapper_checkpoint.txt
[2025-11-22 19:20:57] -rw-r--r--. 1 boincer umatlas     21903 Nov 22 19:20 stderr.txt
[2025-11-22 19:20:57] HITS file was successfully produced:
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas 927974421 Nov 22 19:18 shared/HITS.pool.root.1
[2025-11-22 19:20:57]  *** Contents of shared directory: ***
[2025-11-22 19:20:57] total 1327764
[2025-11-22 19:20:57] -rw-r--r--. 2 boincer umatlas 408429932 Nov 21 00:17 ATLAS.root_0
[2025-11-22 19:20:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:17 start_atlas.sh
[2025-11-22 19:20:57] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 00:17 input.tar.gz
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas 927974421 Nov 22 19:18 HITS.pool.root.1
[2025-11-22 19:20:57] -rw-------. 1 boincer umatlas  22599680 Nov 22 19:20 result.tar.gz
19:20:59 (1007770): run_atlas exited; CPU time 478020.932328
19:20:59 (1007770): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN