Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:08 (2487296): wrapper (7.7.26015): starting
00:01:08 (2487296): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:01:08] Arguments: --nthreads 9
[2025-11-21 00:01:08] Threads: 9
[2025-11-21 00:01:08] Checking for CVMFS
[2025-11-21 00:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:01:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:01:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:01:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:01:09] 2.13.2.0 37103 26064 209688 153108 2 153 31578162 40960001 8302 16776704 0 35340807 99.589 35392275 21755 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:01:09] CVMFS is ok
[2025-11-21 00:01:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:01:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:01:09] Further information can be found at the LHC@home message board.
[2025-11-21 00:01:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:01:09] Checking for apptainer binary...
[2025-11-21 00:01:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:01:09] Running /usr/bin/apptainer --version
[2025-11-21 00:01:09] apptainer version 1.4.4-1.el9
[2025-11-21 00:01:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:01:09] c-211-9.aglt2.org
[2025-11-21 00:01:09] apptainer works
[2025-11-21 00:01:09] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:01:09] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:01:09] Starting ATLAS job with PandaID=6891558372
[2025-11-21 00:01:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 03:09:58]  *** The last 200 lines of the pilot log: ***
[2025-11-22 03:09:58] 2025-11-22 08:09:03,208 | INFO     | time since job start (97663s) is within the limit (172800.0s)
[2025-11-22 03:09:58] 2025-11-22 08:09:03,443 | INFO     | monitor loop #5500: job 0:6891558372 is in state 'finished'
[2025-11-22 03:09:58] 2025-11-22 08:09:03,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:09:58] 2025-11-22 08:09:03,716 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 03:09:58] 2025-11-22 08:09:03,724 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2637.862791666667
[2025-11-22 03:09:58] 2025-11-22 08:09:03,733 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6891558372/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 03:09:58] 2025-11-22 08:09:03,734 | INFO     | extracted standard info from prmon json
[2025-11-22 03:09:58] 2025-11-22 08:09:03,734 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 03:09:58] 2025-11-22 08:09:03,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 03:09:58] 2025-11-22 08:09:03,763 | INFO     | fitting pss+swap vs Time
[2025-11-22 03:09:58] 2025-11-22 08:09:03,765 | INFO     | sum of square deviations: 1272992171774.4812
[2025-11-22 03:09:58] 2025-11-22 08:09:03,838 | INFO     | sum of deviations: 6263677686989.856
[2025-11-22 03:09:58] 2025-11-22 08:09:03,839 | INFO     | mean x: 1763750115.9412868
[2025-11-22 03:09:58] 2025-11-22 08:09:03,839 | INFO     | mean y: 3144040.5302935666
[2025-11-22 03:09:58] 2025-11-22 08:09:03,839 | INFO     | intersect: -8675277156.080456
[2025-11-22 03:09:58] 2025-11-22 08:09:03,841 | INFO     | chi2: 11.121775955090449
[2025-11-22 03:09:58] 2025-11-22 08:09:03,844 | INFO     | sum of square deviations: 1261110668392.817
[2025-11-22 03:09:58] 2025-11-22 08:09:03,914 | INFO     | sum of deviations: 6847902441444.564
[2025-11-22 03:09:58] 2025-11-22 08:09:03,915 | INFO     | mean x: 1763749963.4630325
[2025-11-22 03:09:58] 2025-11-22 08:09:03,915 | INFO     | mean y: 3151537.1873433585
[2025-11-22 03:09:58] 2025-11-22 08:09:03,915 | INFO     | intersect: -9574110778.965033
[2025-11-22 03:09:58] 2025-11-22 08:09:03,917 | INFO     | chi2: 7.943215122426132
[2025-11-22 03:09:58] 2025-11-22 08:09:03,917 | INFO     | current chi2=7.943215122426132 (change=28.579615751111103 %)
[2025-11-22 03:09:58] 2025-11-22 08:09:03,920 | INFO     | sum of square deviations: 1249302719000.3965
[2025-11-22 03:09:58] 2025-11-22 08:09:03,991 | INFO     | sum of deviations: 7398270888810.056
[2025-11-22 03:09:58] 2025-11-22 08:09:03,991 | INFO     | mean x: 1763749810.9805155
[2025-11-22 03:09:58] 2025-11-22 08:09:03,991 | INFO     | mean y: 3158640.58265242
[2025-11-22 03:09:58] 2025-11-22 08:09:03,991 | INFO     | intersect: -10441626825.15461
[2025-11-22 03:09:58] 2025-11-22 08:09:03,993 | INFO     | chi2: 4.868655069702363
[2025-11-22 03:09:58] 2025-11-22 08:09:03,993 | INFO     | current chi2=4.868655069702363 (change=38.70674538378474 %)
[2025-11-22 03:09:58] 2025-11-22 08:09:03,995 | INFO     | sum of square deviations: 1237568188116.4504
[2025-11-22 03:09:58] 2025-11-22 08:09:04,061 | INFO     | sum of deviations: 7608148893631.332
[2025-11-22 03:09:58] 2025-11-22 08:09:04,061 | INFO     | mean x: 1763749658.4943254
[2025-11-22 03:09:58] 2025-11-22 08:09:04,061 | INFO     | mean y: 3161366.4817150063
[2025-11-22 03:09:58] 2025-11-22 08:09:04,062 | INFO     | intersect: -10839772495.077417
[2025-11-22 03:09:58] 2025-11-22 08:09:04,064 | INFO     | chi2: 4.265546404055082
[2025-11-22 03:09:58] 2025-11-22 08:09:04,064 | INFO     | current chi2=4.265546404055082 (change=12.387582546161994 %)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,064 | INFO     | right removable region: 1585
[2025-11-22 03:09:58] 2025-11-22 08:09:04,066 | INFO     | sum of square deviations: 1261102424293.7905
[2025-11-22 03:09:58] 2025-11-22 08:09:04,131 | INFO     | sum of deviations: 5708998501319.187
[2025-11-22 03:09:58] 2025-11-22 08:09:04,132 | INFO     | mean x: 1763750268.4724312
[2025-11-22 03:09:58] 2025-11-22 08:09:04,132 | INFO     | mean y: 3151153.754385965
[2025-11-22 03:09:58] 2025-11-22 08:09:04,132 | INFO     | intersect: -7981329286.087079
[2025-11-22 03:09:58] 2025-11-22 08:09:04,134 | INFO     | chi2: 8.55605754845308
[2025-11-22 03:09:58] 2025-11-22 08:09:04,134 | INFO     | current chi2=8.55605754845308 (change=23.069322894092622 %)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,134 | INFO     | left removable region: 10
[2025-11-22 03:09:58] 2025-11-22 08:09:04,136 | INFO     | sum of square deviations: 1211998372112.4138
[2025-11-22 03:09:58] 2025-11-22 08:09:04,199 | INFO     | sum of deviations: 6885561286339.576
[2025-11-22 03:09:58] 2025-11-22 08:09:04,199 | INFO     | mean x: 1763749933.0539682
[2025-11-22 03:09:58] 2025-11-22 08:09:04,200 | INFO     | mean y: 3171333.9225396826
[2025-11-22 03:09:58] 2025-11-22 08:09:04,200 | INFO     | intersect: -10016980951.145067
[2025-11-22 03:09:58] 2025-11-22 08:09:04,202 | INFO     | chi2: 1.4845037358327373
[2025-11-22 03:09:58] 2025-11-22 08:09:04,202 | INFO     | current memory leak: 5.68 B/s (using 1575 data points, chi2=1.48)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,203 | INFO     | could have reported an average CPU frequency of 2672 MHz (56 samples)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | ..............................
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . Timing measurements:
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . get job = 0 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . initial setup = 2 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . payload setup = 5 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . stage-in = 0 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . payload execution = 97623 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . stage-out = 9 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,204 | INFO     | . log creation = 6 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,205 | INFO     | ..............................
[2025-11-22 03:09:58] 2025-11-22 08:09:04,337 | INFO     | 
[2025-11-22 03:09:58] 2025-11-22 08:09:04,489 | INFO     | job summary report
[2025-11-22 03:09:58] 2025-11-22 08:09:04,489 | INFO     | --------------------------------------------------
[2025-11-22 03:09:58] 2025-11-22 08:09:04,489 | INFO     | PanDA job id: 6891558372
[2025-11-22 03:09:58] 2025-11-22 08:09:04,489 | INFO     | task id: 47493068
[2025-11-22 03:09:58] 2025-11-22 08:09:04,489 | INFO     | errors: (none)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | pilot state: finished 
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | transexitcode: 0
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | exeerrorcode: 0
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | exeerrordiag: 
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | exitcode: 0
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | exitmsg: OK
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | cpuconsumptiontime: 331768 s
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | nevents: 1000
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | neventsw: 0
[2025-11-22 03:09:58] 2025-11-22 08:09:04,490 | INFO     | pid: 2497586
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | pgrp: 2497586
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | corecount: 9
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | event service: False
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | sizes: {0: 2298615, 1: 2298814, 5: 2299076, 12: 2299132, 97629: 2369094, 97630: 2369093, 97639: 2378327, 97648: 2378517}
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | --------------------------------------------------
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | 
[2025-11-22 03:09:58] 2025-11-22 08:09:04,491 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 03:09:58] 2025-11-22 08:09:04,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 03:09:58] 2025-11-22 08:09:04,550 | INFO     | job 6891558372 has completed (purged errors)
[2025-11-22 03:09:58] 2025-11-22 08:09:04,551 | INFO     | overall cleanup function is called
[2025-11-22 03:09:58] 2025-11-22 08:09:05,568 | INFO     | --- collectZombieJob: --- 10, [2497586]
[2025-11-22 03:09:58] 2025-11-22 08:09:05,568 | INFO     | zombie collector waiting for pid 2497586
[2025-11-22 03:09:58] 2025-11-22 08:09:05,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 03:09:58] 2025-11-22 08:09:05,569 | INFO     | collected zombie processes
[2025-11-22 03:09:58] 2025-11-22 08:09:05,569 | INFO     | will attempt to kill all subprocesses of pid=2497586
[2025-11-22 03:09:58] 2025-11-22 08:09:05,937 | INFO     | process IDs to be killed: [2497586] (in reverse order)
[2025-11-22 03:09:58] 2025-11-22 08:09:06,049 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 03:09:58] 2025-11-22 08:09:06,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 03:09:58] 2025-11-22 08:09:06,060 | INFO     | did not find any defunct processes belonging to 2497586
[2025-11-22 03:09:58] 2025-11-22 08:09:06,071 | INFO     | did not find any defunct processes belonging to 2497586
[2025-11-22 03:09:58] 2025-11-22 08:09:06,073 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 03:09:58] 2025-11-22 08:09:06,073 | INFO     | ready for new job
[2025-11-22 03:09:58] 2025-11-22 08:09:06,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 03:09:58] 2025-11-22 08:09:06,078 | INFO     | ***************************************
[2025-11-22 03:09:58] 2025-11-22 08:09:06,079 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 03:09:58] 2025-11-22 08:09:06,079 | INFO     | ***************************************
[2025-11-22 03:09:58] 2025-11-22 08:09:06,079 | INFO     | 
[2025-11-22 03:09:58] 2025-11-22 08:09:06,082 | INFO     | architecture information:
[2025-11-22 03:09:58] 2025-11-22 08:09:06,083 | INFO     | executing command: cat /etc/os-release
[2025-11-22 03:09:58] 2025-11-22 08:09:06,102 | INFO     | cat /etc/os-release:
[2025-11-22 03:09:58] NAME="CentOS Linux"
[2025-11-22 03:09:58] VERSION="7 (Core)"
[2025-11-22 03:09:58] ID="centos"
[2025-11-22 03:09:58] ID_LIKE="rhel fedora"
[2025-11-22 03:09:58] VERSION_ID="7"
[2025-11-22 03:09:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 03:09:58] ANSI_COLOR="0;31"
[2025-11-22 03:09:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 03:09:58] HOME_URL="https://www.centos.org/"
[2025-11-22 03:09:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 03:09:58] 
[2025-11-22 03:09:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 03:09:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 03:09:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 03:09:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 03:09:58] 
[2025-11-22 03:09:58] 2025-11-22 08:09:06,103 | INFO     | ***************************************
[2025-11-22 03:09:58] 2025-11-22 08:09:06,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 03:09:58] 2025-11-22 08:09:06,623 | INFO     | sufficient remaining disk space (59406024704 B)
[2025-11-22 03:09:58] 2025-11-22 08:09:06,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 03:09:58] 2025-11-22 08:09:06,624 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 03:09:58] 2025-11-22 08:09:06,624 | INFO     | update_server=False
[2025-11-22 03:09:58] 2025-11-22 08:09:06,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 03:09:58] 2025-11-22 08:09:06,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 03:09:58] 2025-11-22 08:09:06,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 03:09:58] 2025-11-22 08:09:06,849 | INFO     | all payload control threads have been joined
[2025-11-22 03:09:58] 2025-11-22 08:09:06,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:09:58] 2025-11-22 08:09:06,953 | INFO     | aborting loop
[2025-11-22 03:09:58] 2025-11-22 08:09:07,284 | INFO     | all data control threads have been joined
[2025-11-22 03:09:58] 2025-11-22 08:09:07,630 | INFO     | [job] retrieve thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:07,831 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:07,855 | INFO     | [payload] control thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:07,958 | INFO     | [job] job monitor thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:07,965 | INFO     | [data] copytool_in thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:07,971 | INFO     | all job control threads have been joined
[2025-11-22 03:09:58] 2025-11-22 08:09:08,095 | INFO     | [payload] validate_post thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:08,290 | INFO     | [data] control thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:08,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:08,631 | INFO     | [data] copytool_out thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:08,977 | INFO     | [job] control thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:08,979 | INFO     | [job] validate thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:09,025 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:09,046 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:09,180 | INFO     | [payload] failed_post thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:09,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:09:58] 2025-11-22 08:09:10,356 | INFO     | [job] queue monitor thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:10,632 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 03:09:58] 2025-11-22 08:09:27,932 | INFO     | [monitor] cgroup control has ended
[2025-11-22 03:09:58] 2025-11-22 08:09:28,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415031830336)>', '<ExcThread(monitor, started 140414090737408)>']
[2025-11-22 03:09:58] 2025-11-22 08:09:33,964 | INFO     | all workflow threads have been joined
[2025-11-22 03:09:58] 2025-11-22 08:09:33,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 03:09:58] 2025-11-22 08:09:33,965 | INFO     | traces error code: 0
[2025-11-22 03:09:58] 2025-11-22 08:09:33,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 03:09:58] 2025-11-22 08:09:36,706 | INFO     | PID=2491142 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 03:09:58] 2025-11-22 08:09:36,706 | INFO     | .. there are 14 such processes running
[2025-11-22 03:09:58] 2025-11-22 08:09:36,729 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 03:09:58] 2025-11-22 08:09:36,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 03:09:58] 2025-11-22 08:09:36,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 03:09:58] 2025-11-22 08:09:36,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 03:09:58] 2025-11-22 08:09:36,730 | INFO     | [monitor] control thread has ended
[2025-11-22 03:09:58] 2025-11-22 08:09:36,921 [wrapper] ==== pilot stdout END ====
[2025-11-22 03:09:58] 2025-11-22 08:09:36,924 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 03:09:58] 2025-11-22 08:09:36,927 [wrapper] pilotpid: 2491142
[2025-11-22 03:09:58] 2025-11-22 08:09:36,933 [wrapper] Pilot exit status: 0
[2025-11-22 03:09:58] 2025-11-22 08:09:37,158 [wrapper] pandaids: 6891558372
[2025-11-22 03:09:58] 2025-11-22 08:09:37,674 [wrapper] cleanup supervisor_pilot 1714350 2491143
[2025-11-22 03:09:58] 2025-11-22 08:09:37,679 [wrapper] Test setup, not cleaning
[2025-11-22 03:09:58] 2025-11-22 08:09:37,682 [wrapper] apfmon messages muted
[2025-11-22 03:09:58] 2025-11-22 08:09:37,685 [wrapper] ==== wrapper stdout END ====
[2025-11-22 03:09:58] 2025-11-22 08:09:37,688 [wrapper] ==== wrapper stderr END ====
[2025-11-22 03:09:58]  *** Error codes and diagnostics ***
[2025-11-22 03:09:58]     "exeErrorCode": 0,
[2025-11-22 03:09:58]     "exeErrorDiag": "",
[2025-11-22 03:09:58]     "pilotErrorCode": 0,
[2025-11-22 03:09:58]     "pilotErrorDiag": "",
[2025-11-22 03:09:58]  *** Listing of results directory ***
[2025-11-22 03:09:58] total 1330048
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:20 queuedata.json
[2025-11-22 03:09:58] -rwx------. 1 boincer umatlas     36292 Nov 18 10:21 runpilot2-wrapper.sh
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 03:09:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:01 run_atlas
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:01 job.xml
[2025-11-22 03:09:58] -rw-r--r--. 2 boincer umatlas 408768377 Nov 21 00:01 EVNT.47493065._000056.pool.root.1
[2025-11-22 03:09:58] -rw-r--r--. 2 boincer umatlas     15120 Nov 21 00:01 start_atlas.sh
[2025-11-22 03:09:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:01 shared
[2025-11-22 03:09:58] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 00:01 input.tar.gz
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:01 boinc_lockfile
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas      2768 Nov 21 00:01 pandaJob.out
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas    989817 Nov 21 00:01 agis_schedconf.cvmfs.json
[2025-11-22 03:09:58] drwx------. 5 boincer umatlas      4096 Nov 21 00:01 pilot3
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas       533 Nov 22 02:42 boinc_task_state.xml
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas      6614 Nov 22 03:04 init_data.xml
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas 920329272 Nov 22 03:08 HITS.47493068._000551.pool.root.1
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas      1072 Nov 22 03:08 memory_monitor_summary.json
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas   1526164 Nov 22 03:08 agis_ddmendpoints.agis.ALL.json
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas   2635405 Nov 22 03:08 log.47493068._000551.job.log.tgz.1
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas      8658 Nov 22 03:09 heartbeat.json
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas        95 Nov 22 03:09 pilot_heartbeat.json
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas       823 Nov 22 03:09 pilotlog.txt
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas  11840792 Nov 22 03:09 log.47493068._000551.job.log.1
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas       353 Nov 22 03:09 output.list
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas       620 Nov 22 03:09 runtime_log
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas  14499840 Nov 22 03:09 result.tar.gz
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas      8699 Nov 22 03:09 runtime_log.err
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas       666 Nov 22 03:09 jzHLDmUhcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7BFKDmIBEwYn.diag
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 03:09 boinc_mmap_file
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas        29 Nov 22 03:09 wrapper_checkpoint.txt
[2025-11-22 03:09:58] -rw-r--r--. 1 boincer umatlas     21337 Nov 22 03:09 stderr.txt
[2025-11-22 03:09:58] HITS file was successfully produced:
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas 920329272 Nov 22 03:08 shared/HITS.pool.root.1
[2025-11-22 03:09:58]  *** Contents of shared directory: ***
[2025-11-22 03:09:58] total 1312712
[2025-11-22 03:09:58] -rw-r--r--. 2 boincer umatlas 408768377 Nov 21 00:01 ATLAS.root_0
[2025-11-22 03:09:58] -rw-r--r--. 2 boincer umatlas     15120 Nov 21 00:01 start_atlas.sh
[2025-11-22 03:09:58] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 00:01 input.tar.gz
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas 920329272 Nov 22 03:08 HITS.pool.root.1
[2025-11-22 03:09:58] -rw-------. 1 boincer umatlas  14499840 Nov 22 03:09 result.tar.gz
03:10:00 (2487296): run_atlas exited; CPU time 334393.747108
03:10:00 (2487296): called boinc_finish(0)

</stderr_txt>
]]>

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