Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:05:13 (11165): wrapper (7.7.26015): starting
01:05:13 (11165): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 01:05:13] Arguments: --nthreads 8
[2025-11-24 01:05:13] Threads: 8
[2025-11-24 01:05:13] Checking for CVMFS
[2025-11-24 01:05:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:05:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:05:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:05:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:05:16] 2.11.2.0 16343 281584 135528 153226 1 118 16368878 25165824 4292 130560 3 139276779 99.870 76313496 2814 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 01:05:16] CVMFS is ok
[2025-11-24 01:05:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:05:16] Checking for apptainer binary...
[2025-11-24 01:05:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:05:16] Running /usr/bin/apptainer --version
[2025-11-24 01:05:16] apptainer version 1.3.2-1.el7
[2025-11-24 01:05:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:05:26] cg-vwn436.simple-grid.lan
[2025-11-24 01:05:26] apptainer works
[2025-11-24 01:05:26] Set ATHENA_PROC_NUMBER=8
[2025-11-24 01:05:26] Set ATHENA_CORE_NUMBER=8
[2025-11-24 01:05:26] Starting ATLAS job with PandaID=6893876770
[2025-11-24 01:05:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:58:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:58:07] 2025-11-24 21:57:19,716 | INFO     | time since job start (78459s) is within the limit (172800.0s)
[2025-11-24 22:58:07] 2025-11-24 21:57:21,036 | INFO     | monitor loop #5281: job 0:6893876770 is in state 'finished'
[2025-11-24 22:58:07] 2025-11-24 21:57:21,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:58:07] 2025-11-24 21:57:21,723 | INFO     | time since job start (78461s) is within the limit (172800.0s)
[2025-11-24 22:58:07] 2025-11-24 21:57:23,541 | INFO     | monitor loop #5282: job 0:6893876770 is in state 'finished'
[2025-11-24 22:58:07] 2025-11-24 21:57:23,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:58:07] 2025-11-24 21:57:23,731 | INFO     | time since job start (78463s) is within the limit (172800.0s)
[2025-11-24 22:58:07] 2025-11-24 21:57:25,738 | INFO     | time since job start (78465s) is within the limit (172800.0s)
[2025-11-24 22:58:07] 2025-11-24 21:57:26,053 | INFO     | monitor loop #5283: job 0:6893876770 is in state 'finished'
[2025-11-24 22:58:07] 2025-11-24 21:57:26,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:58:07] 2025-11-24 21:57:26,901 | INFO     | PID=15038 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:58:07] 2025-11-24 21:57:26,901 | INFO     | .. there are 9 such processes running
[2025-11-24 22:58:07] 2025-11-24 21:57:27,902 | INFO     | time since job start (78467s) is within the limit (172800.0s)
[2025-11-24 22:58:07] 2025-11-24 21:57:28,561 | INFO     | monitor loop #5284: job 0:6893876770 is in state 'finished'
[2025-11-24 22:58:07] 2025-11-24 21:57:28,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:58:07] 2025-11-24 21:57:29,910 | INFO     | time since job start (78469s) is within the limit (172800.0s)
[2025-11-24 22:58:07] 2025-11-24 21:57:30,672 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:58:07] 2025-11-24 21:57:30,673 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 22:58:07] 2025-11-24 21:57:30,675 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893876770/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:58:07] 2025-11-24 21:57:30,676 | INFO     | extracted standard info from prmon json
[2025-11-24 22:58:07] 2025-11-24 21:57:30,676 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:58:07] 2025-11-24 21:57:30,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:58:07] 2025-11-24 21:57:30,715 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:58:07] 2025-11-24 21:57:30,717 | INFO     | sum of square deviations: 645728599010.8329
[2025-11-24 22:58:07] 2025-11-24 21:57:30,790 | INFO     | sum of deviations: 2613440120043.847
[2025-11-24 22:58:07] 2025-11-24 21:57:30,791 | INFO     | mean x: 1763982403.1346908
[2025-11-24 22:58:07] 2025-11-24 21:57:30,791 | INFO     | mean y: 2820703.0125293657
[2025-11-24 22:58:07] 2025-11-24 21:57:30,791 | INFO     | intersect: -7136498184.931321
[2025-11-24 22:58:07] 2025-11-24 21:57:30,792 | INFO     | chi2: 30.00615918085274
[2025-11-24 22:58:07] 2025-11-24 21:57:30,794 | INFO     | sum of square deviations: 638173773709.3708
[2025-11-24 22:58:07] 2025-11-24 21:57:30,879 | INFO     | sum of deviations: 3020635761013.6006
[2025-11-24 22:58:07] 2025-11-24 21:57:30,880 | INFO     | mean x: 1763982250.6391509
[2025-11-24 22:58:07] 2025-11-24 21:57:30,880 | INFO     | mean y: 2828920.855345912
[2025-11-24 22:58:07] 2025-11-24 21:57:30,880 | INFO     | intersect: -8346539366.567329
[2025-11-24 22:58:07] 2025-11-24 21:57:30,882 | INFO     | chi2: 26.874900165227533
[2025-11-24 22:58:07] 2025-11-24 21:57:30,882 | INFO     | current chi2=26.874900165227533 (change=10.435387604099956 %)
[2025-11-24 22:58:07] 2025-11-24 21:57:30,882 | INFO     | right removable region: 1271
[2025-11-24 22:58:07] 2025-11-24 21:57:30,884 | INFO     | sum of square deviations: 638172889819.3706
[2025-11-24 22:58:07] 2025-11-24 21:57:30,952 | INFO     | sum of deviations: 2083893042101.1345
[2025-11-24 22:58:07] 2025-11-24 21:57:30,953 | INFO     | mean x: 1763982555.6391509
[2025-11-24 22:58:07] 2025-11-24 21:57:30,953 | INFO     | mean y: 2831390.6800314467
[2025-11-24 22:58:07] 2025-11-24 21:57:30,953 | INFO     | intersect: -5757286334.039755
[2025-11-24 22:58:07] 2025-11-24 21:57:30,954 | INFO     | chi2: 25.315725524956285
[2025-11-24 22:58:07] 2025-11-24 21:57:30,955 | INFO     | current chi2=25.315725524956285 (change=15.631569597516076 %)
[2025-11-24 22:58:07] 2025-11-24 21:57:30,955 | INFO     | left removable region: 10
[2025-11-24 22:58:07] 2025-11-24 21:57:30,974 | INFO     | sum of square deviations: 621759319745.9716
[2025-11-24 22:58:07] 2025-11-24 21:57:31,026 | INFO     | sum of deviations: 2105894864543.6396
[2025-11-24 22:58:07] 2025-11-24 21:57:31,027 | INFO     | mean x: 1763982525.1490881
[2025-11-24 22:58:07] 2025-11-24 21:57:31,027 | INFO     | mean y: 2851270.7731958763
[2025-11-24 22:58:07] 2025-11-24 21:57:31,027 | INFO     | intersect: -5971746331.356683
[2025-11-24 22:58:07] 2025-11-24 21:57:31,028 | INFO     | chi2: 17.728300377937646
[2025-11-24 22:58:07] 2025-11-24 21:57:31,029 | INFO     | current memory leak: 3.39 B/s (using 1261 data points, chi2=17.73)
[2025-11-24 22:58:07] 2025-11-24 21:57:31,031 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-24 22:58:07] 2025-11-24 21:57:31,031 | INFO     | ..............................
[2025-11-24 22:58:07] 2025-11-24 21:57:31,031 | INFO     | . Timing measurements:
[2025-11-24 22:58:07] 2025-11-24 21:57:31,031 | INFO     | . get job = 0 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,031 | INFO     | . initial setup = 11 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,031 | INFO     | . payload setup = 153 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,032 | INFO     | . stage-in = 0 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,032 | INFO     | . payload execution = 78019 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,032 | INFO     | . stage-out = 6 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,032 | INFO     | . log creation = 2 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,032 | INFO     | ..............................
[2025-11-24 22:58:07] 2025-11-24 21:57:31,209 | INFO     | 
[2025-11-24 22:58:07] 2025-11-24 21:57:31,209 | INFO     | job summary report
[2025-11-24 22:58:07] 2025-11-24 21:57:31,209 | INFO     | --------------------------------------------------
[2025-11-24 22:58:07] 2025-11-24 21:57:31,209 | INFO     | PanDA job id: 6893876770
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | task id: 47523449
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | errors: (none)
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | pilot state: finished 
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | transexitcode: 0
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | exeerrorcode: 0
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | exeerrordiag: 
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | exitcode: 0
[2025-11-24 22:58:07] 2025-11-24 21:57:31,210 | INFO     | exitmsg: OK
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | cpuconsumptiontime: 340243 s
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | nevents: 1000
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | neventsw: 0
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | pid: 21664
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | pgrp: 21664
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | corecount: 8
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | event service: False
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298812, 3: 2298812, 14: 2298840, 24: 2298868, 35: 2299024, 46: 2299052, 57: 2299080, 67: 2299108, 78: 2299136, 89: 2299472, 93:
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | --------------------------------------------------
[2025-11-24 22:58:07] 2025-11-24 21:57:31,211 | INFO     | 
[2025-11-24 22:58:07] 2025-11-24 21:57:31,212 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 22:58:07] 2025-11-24 21:57:31,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:58:07] 2025-11-24 21:57:31,674 | INFO     | job 6893876770 has completed (purged errors)
[2025-11-24 22:58:07] 2025-11-24 21:57:31,674 | INFO     | overall cleanup function is called
[2025-11-24 22:58:07] 2025-11-24 21:57:32,698 | INFO     | --- collectZombieJob: --- 10, [21664]
[2025-11-24 22:58:07] 2025-11-24 21:57:32,698 | INFO     | zombie collector waiting for pid 21664
[2025-11-24 22:58:07] 2025-11-24 21:57:32,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:58:07] 2025-11-24 21:57:32,698 | INFO     | collected zombie processes
[2025-11-24 22:58:07] 2025-11-24 21:57:32,699 | INFO     | will attempt to kill all subprocesses of pid=21664
[2025-11-24 22:58:07] 2025-11-24 21:57:32,845 | INFO     | process IDs to be killed: [21664] (in reverse order)
[2025-11-24 22:58:07] 2025-11-24 21:57:33,717 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:58:07] 2025-11-24 21:57:33,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:58:07] 2025-11-24 21:57:33,721 | INFO     | did not find any defunct processes belonging to 21664
[2025-11-24 22:58:07] 2025-11-24 21:57:33,724 | INFO     | did not find any defunct processes belonging to 21664
[2025-11-24 22:58:07] 2025-11-24 21:57:33,788 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:58:07] 2025-11-24 21:57:33,789 | INFO     | ready for new job
[2025-11-24 22:58:07] 2025-11-24 21:57:33,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:58:07] 2025-11-24 21:57:33,795 | INFO     | ***************************************
[2025-11-24 22:58:07] 2025-11-24 21:57:33,795 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:58:07] 2025-11-24 21:57:33,795 | INFO     | ***************************************
[2025-11-24 22:58:07] 2025-11-24 21:57:33,795 | INFO     | 
[2025-11-24 22:58:07] 2025-11-24 21:57:33,796 | INFO     | pilot is running in a VM
[2025-11-24 22:58:07] 2025-11-24 21:57:33,796 | INFO     | architecture information:
[2025-11-24 22:58:07] 2025-11-24 21:57:33,802 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:58:07] 2025-11-24 21:57:33,978 | INFO     | cat /etc/os-release:
[2025-11-24 22:58:07] NAME="CentOS Linux"
[2025-11-24 22:58:07] VERSION="7 (Core)"
[2025-11-24 22:58:07] ID="centos"
[2025-11-24 22:58:07] ID_LIKE="rhel fedora"
[2025-11-24 22:58:07] VERSION_ID="7"
[2025-11-24 22:58:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:58:07] ANSI_COLOR="0;31"
[2025-11-24 22:58:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:58:07] HOME_URL="https://www.centos.org/"
[2025-11-24 22:58:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:58:07] 
[2025-11-24 22:58:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:58:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:58:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:58:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:58:07] 
[2025-11-24 22:58:07] 2025-11-24 21:57:33,979 | INFO     | ***************************************
[2025-11-24 22:58:07] 2025-11-24 21:57:34,482 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 22:58:07] 2025-11-24 21:57:34,745 | INFO     | sufficient remaining disk space (494832451584 B)
[2025-11-24 22:58:07] 2025-11-24 21:57:34,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:58:07] 2025-11-24 21:57:34,745 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:58:07] 2025-11-24 21:57:34,746 | INFO     | update_server=False
[2025-11-24 22:58:07] 2025-11-24 21:57:34,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:58:07] 2025-11-24 21:57:34,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:58:07] 2025-11-24 21:57:34,751 | INFO     | aborting loop
[2025-11-24 22:58:07] 2025-11-24 21:57:34,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:58:07] 2025-11-24 21:57:34,801 | INFO     | all payload control threads have been joined
[2025-11-24 22:58:07] 2025-11-24 21:57:35,137 | INFO     | all data control threads have been joined
[2025-11-24 22:58:07] 2025-11-24 21:57:35,752 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:35,757 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:35,789 | INFO     | [job] validate thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:35,807 | INFO     | [payload] control thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:35,970 | INFO     | all job control threads have been joined
[2025-11-24 22:58:07] 2025-11-24 21:57:36,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,143 | INFO     | [data] control thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:58:07] 2025-11-24 21:57:36,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:58:07] 2025-11-24 21:57:36,247 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,740 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,748 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,788 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,824 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:36,976 | INFO     | [job] control thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:37,228 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:37,319 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:38,206 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:38,761 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:58:07] 2025-11-24 21:57:56,253 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:58:07] 2025-11-24 21:57:56,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166242469696)>', '<ExcThread(monitor, started 140165511112448)>']
[2025-11-24 22:58:07] 2025-11-24 21:58:01,860 | INFO     | all workflow threads have been joined
[2025-11-24 22:58:07] 2025-11-24 21:58:01,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:58:07] 2025-11-24 21:58:01,860 | INFO     | traces error code: 0
[2025-11-24 22:58:07] 2025-11-24 21:58:01,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:58:07] 2025-11-24 21:58:03,156 | INFO     | PID=15038 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:58:07] 2025-11-24 21:58:03,157 | INFO     | .. there are 9 such processes running
[2025-11-24 22:58:07] 2025-11-24 21:58:03,159 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:58:07] 2025-11-24 21:58:03,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:58:07] 2025-11-24 21:58:03,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:58:07] 2025-11-24 21:58:03,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:58:07] 2025-11-24 21:58:03,159 | INFO     | [monitor] control thread has ended
[2025-11-24 22:58:07] 2025-11-24 21:58:03,574 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:58:07] 2025-11-24 21:58:03,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:58:07] 2025-11-24 21:58:03,759 [wrapper] pilotpid: 15038
[2025-11-24 22:58:07] 2025-11-24 21:58:03,851 [wrapper] Pilot exit status: 0
[2025-11-24 22:58:07] 2025-11-24 21:58:04,230 [wrapper] pandaids: 6893876770
[2025-11-24 22:58:07] 2025-11-24 21:58:04,927 [wrapper] cleanup supervisor_pilot 12536 15039
[2025-11-24 22:58:07] 2025-11-24 21:58:05,020 [wrapper] Test setup, not cleaning
[2025-11-24 22:58:07] 2025-11-24 21:58:05,126 [wrapper] apfmon messages muted
[2025-11-24 22:58:07] 2025-11-24 21:58:05,221 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:58:07] 2025-11-24 21:58:05,280 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:58:07]  *** Error codes and diagnostics ***
[2025-11-24 22:58:07]     "exeErrorCode": 0,
[2025-11-24 22:58:07]     "exeErrorDiag": "",
[2025-11-24 22:58:07]     "pilotErrorCode": 0,
[2025-11-24 22:58:07]     "pilotErrorDiag": "",
[2025-11-24 22:58:07]  *** Listing of results directory ***
[2025-11-24 22:58:07] total 1333120
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc    576529 Nov 20 18:21 pilot3.tar.gz
[2025-11-24 22:58:07] -rwx------. 1 boinc boinc     36292 Nov 20 18:39 runpilot2-wrapper.sh
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc      5112 Nov 20 18:39 queuedata.json
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc       100 Nov 24 01:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:58:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 01:05 run_atlas
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc       105 Nov 24 01:05 job.xml
[2025-11-24 22:58:07] -rw-r--r--. 2 boinc boinc 411512924 Nov 24 01:05 EVNT.47493127._000771.pool.root.1
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc      6390 Nov 24 01:05 init_data.xml
[2025-11-24 22:58:07] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:05 start_atlas.sh
[2025-11-24 22:58:07] drwxrwx--x. 2 boinc boinc        68 Nov 24 01:05 shared
[2025-11-24 22:58:07] -rw-r--r--. 2 boinc boinc    590105 Nov 24 01:05 input.tar.gz
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc         0 Nov 24 01:05 boinc_lockfile
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc      2785 Nov 24 01:05 pandaJob.out
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc    989786 Nov 24 01:09 agis_schedconf.cvmfs.json
[2025-11-24 22:58:07] drwx------. 5 boinc boinc      4096 Nov 24 01:09 pilot3
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc       533 Nov 24 22:24 boinc_task_state.xml
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc 923986615 Nov 24 22:54 HITS.47523449._007707.pool.root.1
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc      1032 Nov 24 22:55 memory_monitor_summary.json
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc   1516227 Nov 24 22:55 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc   2406734 Nov 24 22:55 log.47523449._007707.job.log.tgz.1
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc      8627 Nov 24 22:57 heartbeat.json
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc      8192 Nov 24 22:57 boinc_mmap_file
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc        29 Nov 24 22:57 wrapper_checkpoint.txt
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc        95 Nov 24 22:58 pilot_heartbeat.json
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc       820 Nov 24 22:58 pilotlog.txt
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc  10452856 Nov 24 22:58 log.47523449._007707.job.log.1
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc       353 Nov 24 22:58 output.list
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc       620 Nov 24 22:58 runtime_log
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc  12881920 Nov 24 22:58 result.tar.gz
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc      8817 Nov 24 22:58 runtime_log.err
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc       662 Nov 24 22:58 aeyKDmaoNg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbvGKDmt8o38m.diag
[2025-11-24 22:58:07] -rw-r--r--. 1 boinc boinc     21450 Nov 24 22:58 stderr.txt
[2025-11-24 22:58:07] HITS file was successfully produced:
[2025-11-24 22:58:07] -rw-------. 1 boinc boinc 923986615 Nov 24 22:54 shared/HITS.pool.root.1
[2025-11-24 22:58:07]  *** Contents of shared directory: ***
[2025-11-24 22:58:08] total 1317380
[2025-11-24 22:58:08] -rw-r--r--. 2 boinc boinc 411512924 Nov 24 01:05 ATLAS.root_0
[2025-11-24 22:58:08] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:05 start_atlas.sh
[2025-11-24 22:58:08] -rw-r--r--. 2 boinc boinc    590105 Nov 24 01:05 input.tar.gz
[2025-11-24 22:58:08] -rw-------. 1 boinc boinc 923986615 Nov 24 22:54 HITS.pool.root.1
[2025-11-24 22:58:08] -rw-------. 1 boinc boinc  12881920 Nov 24 22:58 result.tar.gz
22:58:09 (11165): run_atlas exited; CPU time 340619.818759
22:58:09 (11165): called boinc_finish(0)

</stderr_txt>
]]>

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