Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:56 (3179381): wrapper (7.7.26015): starting
00:02:56 (3179381): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 00:02:56] Arguments: --nthreads 12
[2025-11-21 00:02:56] Threads: 12
[2025-11-21 00:02:56] Checking for CVMFS
[2025-11-21 00:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:02:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:02:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:02:59] 2.13.2.0 5670 25261 122996 153108 2 351 37677825 40960000 9163 16776704 0 17030721 99.730 9380169 28128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:02:59] CVMFS is ok
[2025-11-21 00:02:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:02:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:02:59] Further information can be found at the LHC@home message board.
[2025-11-21 00:02:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:02:59] Checking for apptainer binary...
[2025-11-21 00:02:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:02:59] Running /usr/bin/apptainer --version
[2025-11-21 00:02:59] apptainer version 1.4.4-1.el9
[2025-11-21 00:02:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:02:59] c-211-8.aglt2.org
[2025-11-21 00:02:59] apptainer works
[2025-11-21 00:02:59] Set ATHENA_PROC_NUMBER=12
[2025-11-21 00:02:59] Set ATHENA_CORE_NUMBER=12
[2025-11-21 00:03:00] Starting ATLAS job with PandaID=6893876598
[2025-11-21 00:03:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 17:25:07]  *** The last 200 lines of the pilot log: ***
[2025-11-21 17:25:07] 2025-11-21 22:24:21,934 | INFO     | monitor loop #4089: job 0:6893876598 is in state 'finished'
[2025-11-21 17:25:07] 2025-11-21 22:24:21,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:25:07] 2025-11-21 22:24:22,405 | INFO     | PID=3185393 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 17:25:07] 2025-11-21 22:24:22,406 | INFO     | .. there are 10 such processes running
[2025-11-21 17:25:07] 2025-11-21 22:24:23,407 | INFO     | time since job start (62415s) is within the limit (172800.0s)
[2025-11-21 17:25:07] 2025-11-21 22:24:24,484 | INFO     | monitor loop #4090: job 0:6893876598 is in state 'finished'
[2025-11-21 17:25:07] 2025-11-21 22:24:24,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:25:07] 2025-11-21 22:24:25,414 | INFO     | time since job start (62417s) is within the limit (172800.0s)
[2025-11-21 17:25:07] 2025-11-21 22:24:27,002 | INFO     | monitor loop #4091: job 0:6893876598 is in state 'finished'
[2025-11-21 17:25:07] 2025-11-21 22:24:27,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:25:07] 2025-11-21 22:24:27,423 | INFO     | time since job start (62419s) is within the limit (172800.0s)
[2025-11-21 17:25:07] 2025-11-21 22:24:29,473 | INFO     | time since job start (62421s) is within the limit (172800.0s)
[2025-11-21 17:25:07] 2025-11-21 22:24:29,532 | INFO     | monitor loop #4092: job 0:6893876598 is in state 'finished'
[2025-11-21 17:25:07] 2025-11-21 22:24:29,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,090 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 17:25:07] 2025-11-21 22:24:31,112 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2647.982145833333
[2025-11-21 17:25:07] 2025-11-21 22:24:31,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893876598/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,134 | INFO     | extracted standard info from prmon json
[2025-11-21 17:25:07] 2025-11-21 22:24:31,134 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 17:25:07] 2025-11-21 22:24:31,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 17:25:07] 2025-11-21 22:24:31,168 | INFO     | fitting pss+swap vs Time
[2025-11-21 17:25:07] 2025-11-21 22:24:31,169 | INFO     | sum of square deviations: 330055104243.7609
[2025-11-21 17:25:07] 2025-11-21 22:24:31,223 | INFO     | sum of deviations: 3780094405708.27
[2025-11-21 17:25:07] 2025-11-21 22:24:31,224 | INFO     | mean x: 1763732701.2428992
[2025-11-21 17:25:07] 2025-11-21 22:24:31,224 | INFO     | mean y: 3478537.4505386874
[2025-11-21 17:25:07] 2025-11-21 22:24:31,226 | INFO     | intersect: -20196409394.6236
[2025-11-21 17:25:07] 2025-11-21 22:24:31,229 | INFO     | chi2: 20.341465272158594
[2025-11-21 17:25:07] 2025-11-21 22:24:31,231 | INFO     | sum of square deviations: 325230856388.4844
[2025-11-21 17:25:07] 2025-11-21 22:24:31,282 | INFO     | sum of deviations: 4202771671675.2285
[2025-11-21 17:25:07] 2025-11-21 22:24:31,287 | INFO     | mean x: 1763732548.753937
[2025-11-21 17:25:07] 2025-11-21 22:24:31,287 | INFO     | mean y: 3491895.380905512
[2025-11-21 17:25:07] 2025-11-21 22:24:31,288 | INFO     | intersect: -22788211433.839417
[2025-11-21 17:25:07] 2025-11-21 22:24:31,289 | INFO     | chi2: 16.789056517268584
[2025-11-21 17:25:07] 2025-11-21 22:24:31,289 | INFO     | current chi2=16.789056517268584 (change=17.463878375331195 %)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,289 | INFO     | right removable region: 1015
[2025-11-21 17:25:07] 2025-11-21 22:24:31,291 | INFO     | sum of square deviations: 325229459488.4844
[2025-11-21 17:25:07] 2025-11-21 22:24:31,334 | INFO     | sum of deviations: 3291755613781.1797
[2025-11-21 17:25:07] 2025-11-21 22:24:31,335 | INFO     | mean x: 1763732853.753937
[2025-11-21 17:25:07] 2025-11-21 22:24:31,335 | INFO     | mean y: 3493968.8927165354
[2025-11-21 17:25:07] 2025-11-21 22:24:31,335 | INFO     | intersect: -17847833311.50204
[2025-11-21 17:25:07] 2025-11-21 22:24:31,340 | INFO     | chi2: 16.424337274996617
[2025-11-21 17:25:07] 2025-11-21 22:24:31,341 | INFO     | current chi2=16.424337274996617 (change=19.256862496151435 %)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,341 | INFO     | left removable region: 10
[2025-11-21 17:25:07] 2025-11-21 22:24:31,342 | INFO     | sum of square deviations: 314780733441.9902
[2025-11-21 17:25:07] 2025-11-21 22:24:31,422 | INFO     | sum of deviations: 3398980904120.761
[2025-11-21 17:25:07] 2025-11-21 22:24:31,422 | INFO     | mean x: 1763732823.278607
[2025-11-21 17:25:07] 2025-11-21 22:24:31,422 | INFO     | mean y: 3522854.0865671644
[2025-11-21 17:25:07] 2025-11-21 22:24:31,423 | INFO     | intersect: -19041143954.912277
[2025-11-21 17:25:07] 2025-11-21 22:24:31,424 | INFO     | chi2: 9.754684155088468
[2025-11-21 17:25:07] 2025-11-21 22:24:31,424 | INFO     | current memory leak: 10.80 B/s (using 1005 data points, chi2=9.75)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,425 | INFO     | could have reported an average CPU frequency of 2619 MHz (38 samples)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,425 | INFO     | ..............................
[2025-11-21 17:25:07] 2025-11-21 22:24:31,425 | INFO     | . Timing measurements:
[2025-11-21 17:25:07] 2025-11-21 22:24:31,425 | INFO     | . get job = 0 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,426 | INFO     | . initial setup = 6 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,426 | INFO     | . payload setup = 43 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,426 | INFO     | . stage-in = 0 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,434 | INFO     | . payload execution = 62271 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,434 | INFO     | . stage-out = 8 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,434 | INFO     | . log creation = 1 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,434 | INFO     | ..............................
[2025-11-21 17:25:07] 2025-11-21 22:24:31,485 | INFO     | time since job start (62423s) is within the limit (172800.0s)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,901 | INFO     | 
[2025-11-21 17:25:07] 2025-11-21 22:24:31,901 | INFO     | job summary report
[2025-11-21 17:25:07] 2025-11-21 22:24:31,901 | INFO     | --------------------------------------------------
[2025-11-21 17:25:07] 2025-11-21 22:24:31,901 | INFO     | PanDA job id: 6893876598
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | task id: 47523449
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | errors: (none)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | pilot state: finished 
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | transexitcode: 0
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | exeerrorcode: 0
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | exeerrordiag: 
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | exitcode: 0
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | exitmsg: OK
[2025-11-21 17:25:07] 2025-11-21 22:24:31,902 | INFO     | cpuconsumptiontime: 348877 s
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | nevents: 1000
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | neventsw: 0
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | pid: 3200369
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | pgrp: 3200369
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | corecount: 12
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | event service: False
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | sizes: {0: 2298528, 1: 2298783, 2: 2298811, 13: 2298811, 24: 2298867, 32: 2299157, 35: 2299313, 62319: 2355043, 62320: 2355042, 62328: 2364092, 62330: 2364148, 623
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | --------------------------------------------------
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | 
[2025-11-21 17:25:07] 2025-11-21 22:24:31,903 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 17:25:07] 2025-11-21 22:24:31,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,984 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 17:25:07] 2025-11-21 22:24:31,984 | INFO     | job 6893876598 has completed (purged errors)
[2025-11-21 17:25:07] 2025-11-21 22:24:31,984 | INFO     | overall cleanup function is called
[2025-11-21 17:25:07] 2025-11-21 22:24:33,004 | INFO     | --- collectZombieJob: --- 10, [3200369]
[2025-11-21 17:25:07] 2025-11-21 22:24:33,004 | INFO     | zombie collector waiting for pid 3200369
[2025-11-21 17:25:07] 2025-11-21 22:24:33,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 17:25:07] 2025-11-21 22:24:33,005 | INFO     | collected zombie processes
[2025-11-21 17:25:07] 2025-11-21 22:24:33,005 | INFO     | will attempt to kill all subprocesses of pid=3200369
[2025-11-21 17:25:07] 2025-11-21 22:24:33,643 | INFO     | process IDs to be killed: [3200369] (in reverse order)
[2025-11-21 17:25:07] 2025-11-21 22:24:33,813 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 17:25:07] 2025-11-21 22:24:33,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 17:25:07] 2025-11-21 22:24:33,826 | INFO     | did not find any defunct processes belonging to 3200369
[2025-11-21 17:25:07] 2025-11-21 22:24:33,837 | INFO     | did not find any defunct processes belonging to 3200369
[2025-11-21 17:25:07] 2025-11-21 22:24:33,842 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 17:25:07] 2025-11-21 22:24:33,843 | INFO     | ready for new job
[2025-11-21 17:25:07] 2025-11-21 22:24:33,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 17:25:07] 2025-11-21 22:24:33,928 | INFO     | ***************************************
[2025-11-21 17:25:07] 2025-11-21 22:24:33,928 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 17:25:07] 2025-11-21 22:24:33,928 | INFO     | ***************************************
[2025-11-21 17:25:07] 2025-11-21 22:24:33,929 | INFO     | 
[2025-11-21 17:25:07] 2025-11-21 22:24:33,935 | INFO     | architecture information:
[2025-11-21 17:25:07] 2025-11-21 22:24:33,936 | INFO     | executing command: cat /etc/os-release
[2025-11-21 17:25:07] 2025-11-21 22:24:34,013 | INFO     | cat /etc/os-release:
[2025-11-21 17:25:07] NAME="CentOS Linux"
[2025-11-21 17:25:07] VERSION="7 (Core)"
[2025-11-21 17:25:07] ID="centos"
[2025-11-21 17:25:07] ID_LIKE="rhel fedora"
[2025-11-21 17:25:07] VERSION_ID="7"
[2025-11-21 17:25:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 17:25:07] ANSI_COLOR="0;31"
[2025-11-21 17:25:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 17:25:07] HOME_URL="https://www.centos.org/"
[2025-11-21 17:25:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 17:25:07] 
[2025-11-21 17:25:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 17:25:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 17:25:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 17:25:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 17:25:07] 
[2025-11-21 17:25:07] 2025-11-21 22:24:34,014 | INFO     | ***************************************
[2025-11-21 17:25:07] 2025-11-21 22:24:34,517 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 17:25:07] 2025-11-21 22:24:34,557 | INFO     | sufficient remaining disk space (59539193856 B)
[2025-11-21 17:25:07] 2025-11-21 22:24:34,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 17:25:07] 2025-11-21 22:24:34,557 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 17:25:07] 2025-11-21 22:24:34,557 | INFO     | update_server=False
[2025-11-21 17:25:07] 2025-11-21 22:24:34,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 17:25:07] 2025-11-21 22:24:34,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 17:25:07] 2025-11-21 22:24:34,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 17:25:07] 2025-11-21 22:24:34,594 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 17:25:07] 2025-11-21 22:24:34,594 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 17:25:07] 2025-11-21 22:24:34,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:25:07] 2025-11-21 22:24:34,595 | INFO     | will abort loop
[2025-11-21 17:25:07] 2025-11-21 22:24:34,793 | INFO     | all data control threads have been joined
[2025-11-21 17:25:07] 2025-11-21 22:24:34,834 | INFO     | all job control threads have been joined
[2025-11-21 17:25:07] 2025-11-21 22:24:35,362 | INFO     | all payload control threads have been joined
[2025-11-21 17:25:07] 2025-11-21 22:24:35,563 | INFO     | [job] retrieve thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:35,567 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:35,600 | INFO     | [job] job monitor thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:35,801 | INFO     | [data] control thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:35,813 | INFO     | [job] validate thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:35,840 | INFO     | [job] control thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:35,992 | INFO     | [payload] failed_post thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,256 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,271 | INFO     | [payload] validate_post thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,368 | INFO     | [payload] control thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,567 | INFO     | [data] copytool_out thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,572 | INFO     | [data] copytool_in thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,591 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:36,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:25:07] 2025-11-21 22:24:37,931 | INFO     | [job] queue monitor thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:38,567 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 17:25:07] 2025-11-21 22:24:57,292 | INFO     | [monitor] cgroup control has ended
[2025-11-21 17:25:07] 2025-11-21 22:24:59,180 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595556386624)>', '<ExcThread(monitor, started 140594546472704)>']
[2025-11-21 17:25:07] 2025-11-21 22:25:04,211 | INFO     | all workflow threads have been joined
[2025-11-21 17:25:07] 2025-11-21 22:25:04,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 17:25:07] 2025-11-21 22:25:04,212 | INFO     | traces error code: 0
[2025-11-21 17:25:07] 2025-11-21 22:25:04,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 17:25:07] 2025-11-21 22:25:05,515 | INFO     | PID=3185393 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 17:25:07] 2025-11-21 22:25:05,515 | INFO     | .. there are 10 such processes running
[2025-11-21 17:25:07] 2025-11-21 22:25:05,515 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 17:25:07] 2025-11-21 22:25:05,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 17:25:07] 2025-11-21 22:25:05,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 17:25:07] 2025-11-21 22:25:05,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 17:25:07] 2025-11-21 22:25:05,516 | INFO     | [monitor] control thread has ended
[2025-11-21 17:25:07] 2025-11-21 22:25:05,643 [wrapper] ==== pilot stdout END ====
[2025-11-21 17:25:07] 2025-11-21 22:25:05,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 17:25:07] 2025-11-21 22:25:05,761 [wrapper] pilotpid: 3185393
[2025-11-21 17:25:07] 2025-11-21 22:25:05,799 [wrapper] Pilot exit status: 0
[2025-11-21 17:25:07] 2025-11-21 22:25:05,966 [wrapper] pandaids: 6893876598
[2025-11-21 17:25:07] 2025-11-21 22:25:06,143 [wrapper] cleanup supervisor_pilot  711113 3185394
[2025-11-21 17:25:07] 2025-11-21 22:25:06,212 [wrapper] Test setup, not cleaning
[2025-11-21 17:25:07] 2025-11-21 22:25:06,253 [wrapper] apfmon messages muted
[2025-11-21 17:25:07] 2025-11-21 22:25:06,297 [wrapper] ==== wrapper stdout END ====
[2025-11-21 17:25:07] 2025-11-21 22:25:06,321 [wrapper] ==== wrapper stderr END ====
[2025-11-21 17:25:07]  *** Error codes and diagnostics ***
[2025-11-21 17:25:07]     "exeErrorCode": 0,
[2025-11-21 17:25:07]     "exeErrorDiag": "",
[2025-11-21 17:25:07]     "pilotErrorCode": 0,
[2025-11-21 17:25:07]     "pilotErrorDiag": "",
[2025-11-21 17:25:07]  *** Listing of results directory ***
[2025-11-21 17:25:07] total 1324312
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 12:21 pilot3.tar.gz
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 12:24 queuedata.json
[2025-11-21 17:25:07] -rwx------. 1 boincer umatlas     36292 Nov 20 12:24 runpilot2-wrapper.sh
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 17:25:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:02 run_atlas
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:02 job.xml
[2025-11-21 17:25:07] -rw-r--r--. 2 boincer umatlas 409008000 Nov 21 00:02 EVNT.47493127._000762.pool.root.1
[2025-11-21 17:25:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:02 start_atlas.sh
[2025-11-21 17:25:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:02 shared
[2025-11-21 17:25:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 21 00:02 input.tar.gz
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:02 boinc_lockfile
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 00:02 pandaJob.out
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas        57 Nov 21 00:03 setup.sh.local
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas    989817 Nov 21 00:04 agis_schedconf.cvmfs.json
[2025-11-21 17:25:07] drwx------. 5 boincer umatlas      4096 Nov 21 00:04 pilot3
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas       533 Nov 21 16:59 boinc_task_state.xml
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas      6614 Nov 21 17:19 init_data.xml
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas 920963694 Nov 21 17:22 HITS.47523449._007613.pool.root.1
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas      1057 Nov 21 17:23 memory_monitor_summary.json
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas   1526164 Nov 21 17:24 agis_ddmendpoints.agis.ALL.json
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas   2674899 Nov 21 17:24 log.47523449._007613.job.log.tgz.1
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas        95 Nov 21 17:24 pilot_heartbeat.json
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas      8635 Nov 21 17:24 heartbeat.json
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas       823 Nov 21 17:25 pilotlog.txt
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas   8426507 Nov 21 17:25 log.47523449._007613.job.log.1
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas        29 Nov 21 17:25 wrapper_checkpoint.txt
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 17:25 boinc_mmap_file
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas       353 Nov 21 17:25 output.list
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas       620 Nov 21 17:25 runtime_log
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas  11120640 Nov 21 17:25 result.tar.gz
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas      9340 Nov 21 17:25 runtime_log.err
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas       659 Nov 21 17:25 jc5LDmuZNg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLMIKDmPqnn0m.diag
[2025-11-21 17:25:07] -rw-r--r--. 1 boincer umatlas     21869 Nov 21 17:25 stderr.txt
[2025-11-21 17:25:07] HITS file was successfully produced:
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas 920963694 Nov 21 17:22 shared/HITS.pool.root.1
[2025-11-21 17:25:07]  *** Contents of shared directory: ***
[2025-11-21 17:25:07] total 1310264
[2025-11-21 17:25:07] -rw-r--r--. 2 boincer umatlas 409008000 Nov 21 00:02 ATLAS.root_0
[2025-11-21 17:25:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:02 start_atlas.sh
[2025-11-21 17:25:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 21 00:02 input.tar.gz
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas 920963694 Nov 21 17:22 HITS.pool.root.1
[2025-11-21 17:25:07] -rw-------. 1 boincer umatlas  11120640 Nov 21 17:25 result.tar.gz
17:25:08 (3179381): run_atlas exited; CPU time 350060.954155
17:25:08 (3179381): called boinc_finish(0)

</stderr_txt>
]]>

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