Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:37 (1153571): wrapper (7.7.26015): starting
20:46:37 (1153571): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 20:46:37] Arguments: --nthreads 12
[2025-11-20 20:46:37] Threads: 12
[2025-11-20 20:46:37] Checking for CVMFS
[2025-11-20 20:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:46:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:46:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:46:38] 2.11.5.0 3793068 20414 303336 153108 3 286 38875105 45568001 14719 130560 0 202917031 99.810 108370896 18461 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-20 20:46:38] CVMFS is ok
[2025-11-20 20:46:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 20:46:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 20:46:38] Further information can be found at the LHC@home message board.
[2025-11-20 20:46:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:46:38] Checking for apptainer binary...
[2025-11-20 20:46:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:46:38] Running /usr/bin/apptainer --version
[2025-11-20 20:46:38] apptainer version 1.4.1-1.el9
[2025-11-20 20:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:46:38] wns0029.triumf.lcg
[2025-11-20 20:46:38] apptainer works
[2025-11-20 20:46:38] Set ATHENA_PROC_NUMBER=12
[2025-11-20 20:46:38] Set ATHENA_CORE_NUMBER=12
[2025-11-20 20:46:38] Starting ATLAS job with PandaID=6893887182
[2025-11-20 20:46:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 20:50:53]  *** The last 200 lines of the pilot log: ***
[2025-11-20 20:50:53] 2025-11-21 04:50:01,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 20:50:53] 2025-11-21 04:50:01,522 | WARNING  | wrong length of table data, x=[1763700431.0], y=[1609.0] (must be same and length>=4)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | could have reported an average CPU frequency of 2585 MHz (4 samples)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | ..............................
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . Timing measurements:
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . get job = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . initial setup = 2 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . payload setup = 4 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . stage-in = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . payload execution = 49 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . stage-out = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . log creation = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | ..............................
[2025-11-20 20:50:53] 2025-11-21 04:50:01,524 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 20:50:53] 2025-11-21 04:50:01,524 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893887182/pilotlog.txt
[2025-11-20 20:50:53] 2025-11-21 04:50:01,552 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 20:50:53] - Log from pilotlog.txt -
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893887182/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | INFO     | extracted standard info from prmon json
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 20:50:53] 2025-11-21 04:50:01,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 20:50:53] 2025-11-21 04:50:01,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 20:50:53] 2025-11-21 04:50:01,522 | WARNING  | wrong length of table data, x=[1763700431.0], y=[1609.0] (must be same and length>=4)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | could have reported an average CPU frequency of 2585 MHz (4 samples)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | ..............................
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . Timing measurements:
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . get job = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . initial setup = 2 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . payload setup = 4 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . stage-in = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . payload execution = 49 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . stage-out = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . log creation = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | ..............................
[2025-11-20 20:50:53] 2025-11-21 04:50:01,524 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 20:50:53] 2025-11-21 04:50:01,524 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893887182/pilotlog.txt
[2025-11-20 20:50:53] 2025-11-21 04:50:01,552 | WARNING  | 
[2025-11-20 20:50:53] [begin log extracts]
[2025-11-20 20:50:53] - Log from pilotlog.txt -
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893887182/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | INFO     | extracted standard info from prmon json
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 20:50:53] 2025-11-21 04:50:01,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 20:50:53] 2025-11-21 04:50:01,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 20:50:53] 2025-11-21 04:50:01,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 20:50:53] 2025-11-21 04:50:01,522 | WARNING  | wrong length of table data, x=[1763700431.0], y=[1609.0] (must be same and length>=4)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | could have reported an average CPU frequency of 2585 MHz (4 samples)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | ..............................
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . Timing measurements:
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . get job = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . initial setup = 2 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . payload setup = 4 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . stage-in = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . payload execution = 49 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . stage-out = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | . log creation = 0 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,523 | INFO     | ..............................
[2025-11-20 20:50:53] 2025-11-21 04:50:01,524 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 20:50:53] 2025-11-21 04:50:01,524 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893887182/pilotlog.txt
[2025-11-20 20:50:53] [end log extracts]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,552 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,553 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 20:50:53] 2025-11-21 04:50:01,613 | INFO     | 
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | job summary report
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | --------------------------------------------------
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | PanDA job id: 6893887182
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | task id: 47523449
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 20:47:52,839 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | pilot state: failed 
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | transexitcode: 65
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | exeerrorcode: 65
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | exitcode: 65
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | cpuconsumptiontime: 43 s
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | nevents: 0
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | neventsw: 0
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | pid: 1163843
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | pgrp: 1163843
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | corecount: 12
[2025-11-20 20:50:53] 2025-11-21 04:50:01,614 | INFO     | event service: False
[2025-11-20 20:50:53] 2025-11-21 04:50:01,615 | INFO     | sizes: {0: 2298577, 1: 2298832, 5: 2299094, 11: 2299150, 57: 2324679, 58: 2324655, 59: 2329129, 180: 2329267}
[2025-11-20 20:50:53] 2025-11-21 04:50:01,615 | INFO     | --------------------------------------------------
[2025-11-20 20:50:53] 2025-11-21 04:50:01,615 | INFO     | 
[2025-11-20 20:50:53] 2025-11-21 04:50:01,615 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 20:50:53] 2025-11-21 04:50:01,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 20:50:53] 2025-11-21 04:50:01,631 | INFO     | job 6893887182 has completed (purged errors)
[2025-11-20 20:50:53] 2025-11-21 04:50:01,631 | INFO     | overall cleanup function is called
[2025-11-20 20:50:53] 2025-11-21 04:50:02,638 | INFO     | --- collectZombieJob: --- 10, [1163843]
[2025-11-20 20:50:53] 2025-11-21 04:50:02,639 | INFO     | zombie collector waiting for pid 1163843
[2025-11-20 20:50:53] 2025-11-21 04:50:02,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 20:50:53] 2025-11-21 04:50:02,639 | INFO     | collected zombie processes
[2025-11-20 20:50:53] 2025-11-21 04:50:02,639 | INFO     | will attempt to kill all subprocesses of pid=1163843
[2025-11-20 20:50:53] 2025-11-21 04:50:02,802 | INFO     | process IDs to be killed: [1163843] (in reverse order)
[2025-11-20 20:50:53] 2025-11-21 04:50:02,867 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 20:50:53] 2025-11-21 04:50:02,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 20:50:53] 2025-11-21 04:50:02,874 | INFO     | did not find any defunct processes belonging to 1163843
[2025-11-20 20:50:53] 2025-11-21 04:50:02,882 | INFO     | did not find any defunct processes belonging to 1163843
[2025-11-20 20:50:53] 2025-11-21 04:50:02,882 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 20:50:53] 2025-11-21 04:50:02,883 | INFO     | ready for new job
[2025-11-20 20:50:53] 2025-11-21 04:50:02,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 20:50:53] 2025-11-21 04:50:02,884 | INFO     | ***************************************
[2025-11-20 20:50:53] 2025-11-21 04:50:02,884 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 20:50:53] 2025-11-21 04:50:02,884 | INFO     | ***************************************
[2025-11-20 20:50:53] 2025-11-21 04:50:02,884 | INFO     | 
[2025-11-20 20:50:53] 2025-11-21 04:50:02,886 | INFO     | architecture information:
[2025-11-20 20:50:53] 2025-11-21 04:50:02,886 | INFO     | executing command: cat /etc/os-release
[2025-11-20 20:50:53] 2025-11-21 04:50:02,897 | INFO     | cat /etc/os-release:
[2025-11-20 20:50:53] NAME="CentOS Linux"
[2025-11-20 20:50:53] VERSION="7 (Core)"
[2025-11-20 20:50:53] ID="centos"
[2025-11-20 20:50:53] ID_LIKE="rhel fedora"
[2025-11-20 20:50:53] VERSION_ID="7"
[2025-11-20 20:50:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 20:50:53] ANSI_COLOR="0;31"
[2025-11-20 20:50:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 20:50:53] HOME_URL="https://www.centos.org/"
[2025-11-20 20:50:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 20:50:53] 
[2025-11-20 20:50:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 20:50:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 20:50:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 20:50:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 20:50:53] 
[2025-11-20 20:50:53] 2025-11-21 04:50:02,898 | INFO     | ***************************************
[2025-11-20 20:50:53] 2025-11-21 04:50:03,400 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 20:50:53] 2025-11-21 04:50:03,414 | INFO     | sufficient remaining disk space (1955165372416 B)
[2025-11-20 20:50:53] 2025-11-21 04:50:03,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 20:50:53] 2025-11-21 04:50:03,415 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 20:50:53] 2025-11-21 04:50:03,415 | INFO     | update_server=False
[2025-11-20 20:50:53] 2025-11-21 04:50:03,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 20:50:53] 2025-11-21 04:50:03,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:50:53] 2025-11-21 04:50:03,575 | INFO     | all job control threads have been joined
[2025-11-20 20:50:53] 2025-11-21 04:50:03,821 | INFO     | all data control threads have been joined
[2025-11-20 20:50:53] 2025-11-21 04:50:04,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:50:53] 2025-11-21 04:50:04,330 | INFO     | aborting loop
[2025-11-20 20:50:53] 2025-11-21 04:50:04,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 20:50:53] 2025-11-21 04:50:04,419 | INFO     | [job] retrieve thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:04,420 | INFO     | [job] queue monitor thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:04,514 | INFO     | all payload control threads have been joined
[2025-11-20 20:50:53] 2025-11-21 04:50:04,580 | INFO     | [job] control thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:04,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 20:50:53] 2025-11-21 04:50:04,826 | INFO     | [data] control thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,014 | INFO     | [data] copytool_in thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,129 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,155 | INFO     | [payload] validate_post thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,336 | INFO     | [job] job monitor thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,373 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,441 | INFO     | [job] validate thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,520 | INFO     | [payload] control thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,629 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,653 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:05,733 | INFO     | [payload] failed_post thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:06,381 | INFO     | [data] copytool_out thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:08,605 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 20:50:53] 2025-11-21 04:50:33,338 | INFO     | PID=1157251 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 20:50:53] 2025-11-21 04:50:33,338 | INFO     | .. there are 20 such processes running
[2025-11-20 20:50:53] 2025-11-21 04:50:33,339 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 20:50:53] 2025-11-21 04:50:33,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 20:50:53] 2025-11-21 04:50:33,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 20:50:53] 2025-11-21 04:50:47,254 | INFO     | [monitor] cgroup control has ended
[2025-11-20 20:50:53] 2025-11-21 04:50:48,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524635526976)>', '<ExcThread(monitor, started 140523872446208)>']
[2025-11-20 20:50:53] 2025-11-21 04:50:49,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 20:50:53] 2025-11-21 04:50:49,419 | INFO     | [monitor] control thread has ended
[2025-11-20 20:50:53] 2025-11-21 04:50:53,548 | INFO     | all workflow threads have been joined
[2025-11-20 20:50:53] 2025-11-21 04:50:53,548 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 20:50:53] 2025-11-21 04:50:53,549 | INFO     | traces error code: 0
[2025-11-20 20:50:53] 2025-11-21 04:50:53,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 20:50:53] 2025-11-21 04:50:53,688 [wrapper] ==== pilot stdout END ====
[2025-11-20 20:50:53] 2025-11-21 04:50:53,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 20:50:53] 2025-11-21 04:50:53,692 [wrapper] pilotpid: 1157251
[2025-11-20 20:50:53] 2025-11-21 04:50:53,694 [wrapper] Pilot exit status: 0
[2025-11-20 20:50:53] 2025-11-21 04:50:53,703 [wrapper] pandaids: 6893887182
[2025-11-20 20:50:53] 2025-11-21 04:50:53,745 [wrapper] cleanup supervisor_pilot 1157257 1157252
[2025-11-20 20:50:53] 2025-11-21 04:50:53,748 [wrapper] Test setup, not cleaning
[2025-11-20 20:50:53] 2025-11-21 04:50:53,750 [wrapper] apfmon messages muted
[2025-11-20 20:50:53] 2025-11-21 04:50:53,752 [wrapper] ==== wrapper stdout END ====
[2025-11-20 20:50:53] 2025-11-21 04:50:53,754 [wrapper] ==== wrapper stderr END ====
[2025-11-20 20:50:53]  *** Error codes and diagnostics ***
[2025-11-20 20:50:53]     "exeErrorCode": 65,
[2025-11-20 20:50:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 20:50:53]     "pilotErrorCode": 1305,
[2025-11-20 20:50:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 20:50:53]  *** Listing of results directory ***
[2025-11-20 20:50:53] total 403796
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc    576529 Nov 20 15:11 pilot3.tar.gz
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc      5112 Nov 20 15:12 queuedata.json
[2025-11-20 20:50:53] -rwx------. 1 boinc boinc     36292 Nov 20 15:13 runpilot2-wrapper.sh
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 20:50:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:46 run_atlas
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:46 job.xml
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc      6594 Nov 20 20:46 init_data.xml
[2025-11-20 20:50:53] -rw-r--r--. 2 boinc boinc 409284958 Nov 20 20:46 EVNT.47493127._000970.pool.root.1
[2025-11-20 20:50:53] -rw-r--r--. 2 boinc boinc     15847 Nov 20 20:46 start_atlas.sh
[2025-11-20 20:50:53] drwxrwx--x. 2 boinc boinc      4096 Nov 20 20:46 shared
[2025-11-20 20:50:53] -rw-r--r--. 2 boinc boinc    590103 Nov 20 20:46 input.tar.gz
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:46 boinc_lockfile
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc      2786 Nov 20 20:46 pandaJob.out
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc    989817 Nov 20 20:46 agis_schedconf.cvmfs.json
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc   1526164 Nov 20 20:46 agis_ddmendpoints.agis.ALL.json
[2025-11-20 20:50:53] drwx------. 5 boinc boinc      4096 Nov 20 20:46 pilot3
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc       524 Nov 20 20:47 boinc_task_state.xml
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc       986 Nov 20 20:47 memory_monitor_summary.json
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc     48004 Nov 20 20:48 log.47523449._009697.job.log.tgz.1
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc        95 Nov 20 20:49 pilot_heartbeat.json
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc     10329 Nov 20 20:50 heartbeat.json
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc        23 Nov 20 20:50 wrapper_checkpoint.txt
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc      8192 Nov 20 20:50 boinc_mmap_file
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc      4823 Nov 20 20:50 pilotlog.txt
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc     92954 Nov 20 20:50 log.47523449._009697.job.log.1
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc       186 Nov 20 20:50 output.list
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc       620 Nov 20 20:50 runtime_log
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc    163840 Nov 20 20:50 result.tar.gz
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc      8636 Nov 20 20:50 runtime_log.err
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc       645 Nov 20 20:50 mpRNDmO1Sg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW9GKDmCCT8qn.diag
[2025-11-20 20:50:53] -rw-r--r--. 1 boinc boinc     22406 Nov 20 20:50 stderr.txt
[2025-11-20 20:50:53] No HITS result produced
[2025-11-20 20:50:53]  *** Contents of shared directory: ***
[2025-11-20 20:50:53] total 400456
[2025-11-20 20:50:53] -rw-r--r--. 2 boinc boinc 409284958 Nov 20 20:46 ATLAS.root_0
[2025-11-20 20:50:53] -rw-r--r--. 2 boinc boinc     15847 Nov 20 20:46 start_atlas.sh
[2025-11-20 20:50:53] -rw-r--r--. 2 boinc boinc    590103 Nov 20 20:46 input.tar.gz
[2025-11-20 20:50:53] -rw-------. 1 boinc boinc    163840 Nov 20 20:50 result.tar.gz
20:50:55 (1153571): run_atlas exited; CPU time 41.399218
20:50:55 (1153571): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN