Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:35:30 (10777): wrapper (7.7.26015): starting
02:35:30 (10777): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:35:30] Arguments: --nthreads 8
[2025-11-24 02:35:30] Threads: 8
[2025-11-24 02:35:30] Checking for CVMFS
[2025-11-24 02:35:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:35:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:35:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:35:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:35:32] 2.11.2.0 22322 207035 138216 153228 1 84 22623959 25165824 4632 130560 2 82553306 99.903 34636070 2515 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:35:32] CVMFS is ok
[2025-11-24 02:35:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:35:32] Checking for apptainer binary...
[2025-11-24 02:35:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:35:32] Running /usr/bin/apptainer --version
[2025-11-24 02:35:33] apptainer version 1.3.2-1.el7
[2025-11-24 02:35:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:35:41] cg-vwn447.simple-grid.lan
[2025-11-24 02:35:41] apptainer works
[2025-11-24 02:35:41] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:35:41] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:35:41] Starting ATLAS job with PandaID=6893876394
[2025-11-24 02:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:43:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:43:56] 2025-11-24 23:42:50,286 | INFO     | time since job start (79403s) is within the limit (172800.0s)
[2025-11-25 00:43:56] 2025-11-24 23:42:51,145 | INFO     | monitor loop #5318: job 0:6893876394 is in state 'finished'
[2025-11-25 00:43:56] 2025-11-24 23:42:51,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:43:56] 2025-11-24 23:42:52,293 | INFO     | time since job start (79405s) is within the limit (172800.0s)
[2025-11-25 00:43:56] 2025-11-24 23:42:53,649 | INFO     | monitor loop #5319: job 0:6893876394 is in state 'finished'
[2025-11-25 00:43:56] 2025-11-24 23:42:53,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:43:56] 2025-11-24 23:42:54,300 | INFO     | time since job start (79407s) is within the limit (172800.0s)
[2025-11-25 00:43:56] 2025-11-24 23:42:56,154 | INFO     | monitor loop #5320: job 0:6893876394 is in state 'finished'
[2025-11-25 00:43:56] 2025-11-24 23:42:56,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:43:56] 2025-11-24 23:42:56,307 | INFO     | time since job start (79409s) is within the limit (172800.0s)
[2025-11-25 00:43:56] 2025-11-24 23:42:58,314 | INFO     | time since job start (79411s) is within the limit (172800.0s)
[2025-11-25 00:43:56] 2025-11-24 23:42:58,668 | INFO     | monitor loop #5321: job 0:6893876394 is in state 'finished'
[2025-11-25 00:43:56] 2025-11-24 23:42:58,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:43:56] 2025-11-24 23:42:59,519 | INFO     | PID=14555 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:43:56] 2025-11-24 23:42:59,520 | INFO     | .. there are 2 such processes running
[2025-11-25 00:43:56] 2025-11-24 23:43:00,324 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 00:43:56] 2025-11-24 23:43:00,325 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 00:43:56] 2025-11-24 23:43:00,328 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893876394/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,328 | INFO     | extracted standard info from prmon json
[2025-11-25 00:43:56] 2025-11-24 23:43:00,328 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:43:56] 2025-11-24 23:43:00,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:43:56] 2025-11-24 23:43:00,360 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:43:56] 2025-11-24 23:43:00,362 | INFO     | sum of square deviations: 668752964102.467
[2025-11-25 00:43:56] 2025-11-24 23:43:00,430 | INFO     | sum of deviations: 2830396966625.0815
[2025-11-25 00:43:56] 2025-11-24 23:43:00,430 | INFO     | mean x: 1763988255.5812693
[2025-11-25 00:43:56] 2025-11-24 23:43:00,430 | INFO     | mean y: 2822165.9040247677
[2025-11-25 00:43:56] 2025-11-24 23:43:00,430 | INFO     | intersect: -7462994474.565465
[2025-11-25 00:43:56] 2025-11-24 23:43:00,432 | INFO     | chi2: 29.288486719206166
[2025-11-25 00:43:56] 2025-11-24 23:43:00,434 | INFO     | sum of square deviations: 661019235866.5999
[2025-11-25 00:43:56] 2025-11-24 23:43:00,522 | INFO     | sum of deviations: 3245442420493.4897
[2025-11-25 00:43:56] 2025-11-24 23:43:00,523 | INFO     | mean x: 1763988103.0854702
[2025-11-25 00:43:56] 2025-11-24 23:43:00,523 | INFO     | mean y: 2830348.641025641
[2025-11-25 00:43:56] 2025-11-24 23:43:00,523 | INFO     | intersect: -8657918852.543755
[2025-11-25 00:43:56] 2025-11-24 23:43:00,524 | INFO     | chi2: 26.136744261447134
[2025-11-25 00:43:56] 2025-11-24 23:43:00,525 | INFO     | current chi2=26.136744261447134 (change=10.761028686716854 %)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,525 | INFO     | right removable region: 1286
[2025-11-25 00:43:56] 2025-11-24 23:43:00,529 | INFO     | sum of square deviations: 661018383696.5994
[2025-11-25 00:43:56] 2025-11-24 23:43:00,581 | INFO     | sum of deviations: 2297827806866.7876
[2025-11-25 00:43:56] 2025-11-24 23:43:00,582 | INFO     | mean x: 1763988408.0854702
[2025-11-25 00:43:56] 2025-11-24 23:43:00,582 | INFO     | mean y: 2832665.774669775
[2025-11-25 00:43:56] 2025-11-24 23:43:00,582 | INFO     | intersect: -6129132367.364127
[2025-11-25 00:43:56] 2025-11-24 23:43:00,584 | INFO     | chi2: 24.647048824621276
[2025-11-25 00:43:56] 2025-11-24 23:43:00,584 | INFO     | current chi2=24.647048824621276 (change=15.847312082331753 %)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,584 | INFO     | left removable region: 10
[2025-11-25 00:43:56] 2025-11-24 23:43:00,586 | INFO     | sum of square deviations: 644213714747.5238
[2025-11-25 00:43:56] 2025-11-24 23:43:00,609 | INFO     | time since job start (79413s) is within the limit (172800.0s)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,632 | INFO     | sum of deviations: 2335038825647.642
[2025-11-25 00:43:56] 2025-11-24 23:43:00,632 | INFO     | mean x: 1763988377.5948277
[2025-11-25 00:43:56] 2025-11-24 23:43:00,632 | INFO     | mean y: 2852273.3087774296
[2025-11-25 00:43:56] 2025-11-24 23:43:00,632 | INFO     | intersect: -6390959679.746896
[2025-11-25 00:43:56] 2025-11-24 23:43:00,634 | INFO     | chi2: 17.124937937472794
[2025-11-25 00:43:56] 2025-11-24 23:43:00,634 | INFO     | current memory leak: 3.62 B/s (using 1276 data points, chi2=17.12)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | ..............................
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | . Timing measurements:
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | . get job = 0 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | . initial setup = 5 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | . payload setup = 160 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | . stage-in = 0 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,636 | INFO     | . payload execution = 78941 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,637 | INFO     | . stage-out = 5 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,637 | INFO     | . log creation = 2 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,637 | INFO     | ..............................
[2025-11-25 00:43:56] 2025-11-24 23:43:00,807 | INFO     | 
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | job summary report
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | --------------------------------------------------
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | PanDA job id: 6893876394
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | task id: 47523449
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | errors: (none)
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | pilot state: finished 
[2025-11-25 00:43:56] 2025-11-24 23:43:00,808 | INFO     | transexitcode: 0
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | exeerrorcode: 0
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | exeerrordiag: 
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | exitcode: 0
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | exitmsg: OK
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | cpuconsumptiontime: 342074 s
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | nevents: 1000
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | neventsw: 0
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | pid: 21138
[2025-11-25 00:43:56] 2025-11-24 23:43:00,809 | INFO     | pgrp: 21138
[2025-11-25 00:43:56] 2025-11-24 23:43:00,810 | INFO     | corecount: 8
[2025-11-25 00:43:56] 2025-11-24 23:43:00,810 | INFO     | event service: False
[2025-11-25 00:43:56] 2025-11-24 23:43:00,810 | INFO     | sizes: {0: 2297922, 1: 2298607, 2: 2298806, 13: 2298806, 23: 2298862, 34: 2298890, 45: 2299046, 56: 2299074, 66: 2299102, 77: 2299130, 88: 2299186, 94: 2299756, 99
[2025-11-25 00:43:56] 2025-11-24 23:43:00,810 | INFO     | --------------------------------------------------
[2025-11-25 00:43:56] 2025-11-24 23:43:00,810 | INFO     | 
[2025-11-25 00:43:56] 2025-11-24 23:43:00,810 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-25 00:43:56] 2025-11-24 23:43:01,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:43:56] 2025-11-24 23:43:01,235 | INFO     | job 6893876394 has completed (purged errors)
[2025-11-25 00:43:56] 2025-11-24 23:43:01,235 | INFO     | overall cleanup function is called
[2025-11-25 00:43:56] 2025-11-24 23:43:02,259 | INFO     | --- collectZombieJob: --- 10, [21138]
[2025-11-25 00:43:56] 2025-11-24 23:43:02,260 | INFO     | zombie collector waiting for pid 21138
[2025-11-25 00:43:56] 2025-11-24 23:43:02,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:43:56] 2025-11-24 23:43:02,260 | INFO     | collected zombie processes
[2025-11-25 00:43:56] 2025-11-24 23:43:02,260 | INFO     | will attempt to kill all subprocesses of pid=21138
[2025-11-25 00:43:56] 2025-11-24 23:43:02,338 | INFO     | process IDs to be killed: [21138] (in reverse order)
[2025-11-25 00:43:56] 2025-11-24 23:43:03,052 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:43:56] 2025-11-24 23:43:03,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:43:56] 2025-11-24 23:43:03,055 | INFO     | did not find any defunct processes belonging to 21138
[2025-11-25 00:43:56] 2025-11-24 23:43:03,060 | INFO     | did not find any defunct processes belonging to 21138
[2025-11-25 00:43:56] 2025-11-24 23:43:03,102 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:43:56] 2025-11-24 23:43:03,102 | INFO     | ready for new job
[2025-11-25 00:43:56] 2025-11-24 23:43:03,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:43:56] 2025-11-24 23:43:03,108 | INFO     | ***************************************
[2025-11-25 00:43:56] 2025-11-24 23:43:03,108 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:43:56] 2025-11-24 23:43:03,108 | INFO     | ***************************************
[2025-11-25 00:43:56] 2025-11-24 23:43:03,108 | INFO     | 
[2025-11-25 00:43:56] 2025-11-24 23:43:03,109 | INFO     | pilot is running in a VM
[2025-11-25 00:43:56] 2025-11-24 23:43:03,109 | INFO     | architecture information:
[2025-11-25 00:43:56] 2025-11-24 23:43:03,111 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:43:56] 2025-11-24 23:43:03,403 | INFO     | cat /etc/os-release:
[2025-11-25 00:43:56] NAME="CentOS Linux"
[2025-11-25 00:43:56] VERSION="7 (Core)"
[2025-11-25 00:43:56] ID="centos"
[2025-11-25 00:43:56] ID_LIKE="rhel fedora"
[2025-11-25 00:43:56] VERSION_ID="7"
[2025-11-25 00:43:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:43:56] ANSI_COLOR="0;31"
[2025-11-25 00:43:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:43:56] HOME_URL="https://www.centos.org/"
[2025-11-25 00:43:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:43:56] 
[2025-11-25 00:43:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:43:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:43:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:43:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:43:56] 
[2025-11-25 00:43:56] 2025-11-24 23:43:03,403 | INFO     | ***************************************
[2025-11-25 00:43:56] 2025-11-24 23:43:03,907 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-25 00:43:56] 2025-11-24 23:43:04,229 | INFO     | sufficient remaining disk space (493126418432 B)
[2025-11-25 00:43:56] 2025-11-24 23:43:04,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:43:56] 2025-11-24 23:43:04,230 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:43:56] 2025-11-24 23:43:04,230 | INFO     | update_server=False
[2025-11-25 00:43:56] 2025-11-24 23:43:04,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:43:56] 2025-11-24 23:43:04,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:43:56] 2025-11-24 23:43:04,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:43:56] 2025-11-24 23:43:04,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:43:56] 2025-11-24 23:43:04,699 | INFO     | aborting loop
[2025-11-25 00:43:56] 2025-11-24 23:43:05,044 | INFO     | all job control threads have been joined
[2025-11-25 00:43:56] 2025-11-24 23:43:05,107 | INFO     | all data control threads have been joined
[2025-11-25 00:43:56] 2025-11-24 23:43:05,236 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,388 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,517 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,567 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,599 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,602 | INFO     | all payload control threads have been joined
[2025-11-25 00:43:56] 2025-11-24 23:43:05,609 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,700 | INFO     | [job] validate thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,707 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,747 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:05,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:43:56] 2025-11-24 23:43:06,050 | INFO     | [job] control thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:06,113 | INFO     | [data] control thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:06,237 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:06,318 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:06,608 | INFO     | [payload] control thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:06,828 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:08,241 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:43:56] 2025-11-24 23:43:33,728 | INFO     | PID=14555 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:43:56] 2025-11-24 23:43:33,729 | INFO     | .. there are 2 such processes running
[2025-11-25 00:43:56] 2025-11-24 23:43:33,730 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:43:56] 2025-11-24 23:43:33,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:43:56] 2025-11-24 23:43:33,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:43:56] 2025-11-24 23:43:45,680 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:43:56] 2025-11-24 23:43:46,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863849080640)>', '<ExcThread(monitor, started 139863110178560)>']
[2025-11-25 00:43:56] 2025-11-24 23:43:47,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:43:56] 2025-11-24 23:43:47,820 | INFO     | [monitor] control thread has ended
[2025-11-25 00:43:56] 2025-11-24 23:43:51,865 | INFO     | all workflow threads have been joined
[2025-11-25 00:43:56] 2025-11-24 23:43:51,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:43:56] 2025-11-24 23:43:51,866 | INFO     | traces error code: 0
[2025-11-25 00:43:56] 2025-11-24 23:43:51,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:43:56] 2025-11-24 23:43:52,046 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:43:56] 2025-11-24 23:43:52,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:43:56] 2025-11-24 23:43:52,240 [wrapper] pilotpid: 14555
[2025-11-25 00:43:56] 2025-11-24 23:43:52,307 [wrapper] Pilot exit status: 0
[2025-11-25 00:43:56] 2025-11-24 23:43:52,772 [wrapper] pandaids: 6893876394
[2025-11-25 00:43:56] 2025-11-24 23:43:53,380 [wrapper] cleanup supervisor_pilot 20469 14556
[2025-11-25 00:43:56] 2025-11-24 23:43:53,463 [wrapper] Test setup, not cleaning
[2025-11-25 00:43:56] 2025-11-24 23:43:53,566 [wrapper] apfmon messages muted
[2025-11-25 00:43:56] 2025-11-24 23:43:53,701 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:43:56] 2025-11-24 23:43:53,767 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:43:56]  *** Error codes and diagnostics ***
[2025-11-25 00:43:56]     "exeErrorCode": 0,
[2025-11-25 00:43:56]     "exeErrorDiag": "",
[2025-11-25 00:43:56]     "pilotErrorCode": 0,
[2025-11-25 00:43:56]     "pilotErrorDiag": "",
[2025-11-25 00:43:56]  *** Listing of results directory ***
[2025-11-25 00:43:56] total 1330832
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc    576529 Nov 20 17:47 pilot3.tar.gz
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc      5112 Nov 20 17:53 queuedata.json
[2025-11-25 00:43:56] -rwx------. 1 boinc boinc     36292 Nov 20 17:53 runpilot2-wrapper.sh
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:43:56] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:35 run_atlas
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:35 job.xml
[2025-11-25 00:43:56] -rw-r--r--. 2 boinc boinc 410088975 Nov 24 02:35 EVNT.47493127._000753.pool.root.1
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc      6390 Nov 24 02:35 init_data.xml
[2025-11-25 00:43:56] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:35 start_atlas.sh
[2025-11-25 00:43:56] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:35 shared
[2025-11-25 00:43:56] -rw-r--r--. 2 boinc boinc    590099 Nov 24 02:35 input.tar.gz
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:35 boinc_lockfile
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc      2782 Nov 24 02:35 pandaJob.out
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc    989786 Nov 24 02:39 agis_schedconf.cvmfs.json
[2025-11-25 00:43:56] drwx------. 5 boinc boinc      4096 Nov 24 02:39 pilot3
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc       533 Nov 25 00:14 boinc_task_state.xml
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc 922914133 Nov 25 00:39 HITS.47523449._007521.pool.root.1
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc      1032 Nov 25 00:41 memory_monitor_summary.json
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc   1516227 Nov 25 00:41 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc   2393389 Nov 25 00:41 log.47523449._007521.job.log.tgz.1
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc      7263 Nov 25 00:43 heartbeat.json
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc        29 Nov 25 00:43 wrapper_checkpoint.txt
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc      8192 Nov 25 00:43 boinc_mmap_file
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc        95 Nov 25 00:43 pilot_heartbeat.json
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc      4884 Nov 25 00:43 pilotlog.txt
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc  10540408 Nov 25 00:43 log.47523449._007521.job.log.1
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc       353 Nov 25 00:43 output.list
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc       620 Nov 25 00:43 runtime_log
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc  12953600 Nov 25 00:43 result.tar.gz
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc      8817 Nov 25 00:43 runtime_log.err
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc       662 Nov 25 00:43 jBPMDms5Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDLIKDmBdS58m.diag
[2025-11-25 00:43:56] -rw-r--r--. 1 boinc boinc     21506 Nov 25 00:43 stderr.txt
[2025-11-25 00:43:56] HITS file was successfully produced:
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc 922914133 Nov 25 00:39 shared/HITS.pool.root.1
[2025-11-25 00:43:56]  *** Contents of shared directory: ***
[2025-11-25 00:43:56] total 1315012
[2025-11-25 00:43:56] -rw-r--r--. 2 boinc boinc 410088975 Nov 24 02:35 ATLAS.root_0
[2025-11-25 00:43:56] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:35 start_atlas.sh
[2025-11-25 00:43:56] -rw-r--r--. 2 boinc boinc    590099 Nov 24 02:35 input.tar.gz
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc 922914133 Nov 25 00:39 HITS.pool.root.1
[2025-11-25 00:43:56] -rw-------. 1 boinc boinc  12953600 Nov 25 00:43 result.tar.gz
00:43:58 (10777): run_atlas exited; CPU time 342316.718683
00:43:58 (10777): called boinc_finish(0)

</stderr_txt>
]]>

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