Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:56 (28802): wrapper (7.7.26015): starting
02:04:56 (28802): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:04:56] Arguments: --nthreads 8
[2025-11-24 02:04:56] Threads: 8
[2025-11-24 02:04:56] Checking for CVMFS
[2025-11-24 02:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:04:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:04:59] 2.11.2.0 25379 281757 135356 153227 1 85 23947681 25165824 4632 130560 3 141326662 99.888 79417098 3062 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:04:59] CVMFS is ok
[2025-11-24 02:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:04:59] Checking for apptainer binary...
[2025-11-24 02:04:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:04:59] Running /usr/bin/apptainer --version
[2025-11-24 02:04:59] apptainer version 1.3.2-1.el7
[2025-11-24 02:04:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:05:06] cg-vwn336.simple-grid.lan
[2025-11-24 02:05:06] apptainer works
[2025-11-24 02:05:06] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:05:06] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:05:06] Starting ATLAS job with PandaID=6893848770
[2025-11-24 02:05:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:51:13]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:51:13] 2025-11-24 22:50:24,921 | INFO     | time since job start (78058s) is within the limit (172800.0s)
[2025-11-24 23:51:13] 2025-11-24 22:50:25,423 | INFO     | monitor loop #5242: job 0:6893848770 is in state 'finished'
[2025-11-24 23:51:13] 2025-11-24 22:50:25,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:51:13] 2025-11-24 22:50:26,928 | INFO     | time since job start (78060s) is within the limit (172800.0s)
[2025-11-24 23:51:13] 2025-11-24 22:50:27,933 | INFO     | monitor loop #5243: job 0:6893848770 is in state 'finished'
[2025-11-24 23:51:13] 2025-11-24 22:50:27,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:51:13] 2025-11-24 22:50:28,937 | INFO     | time since job start (78062s) is within the limit (172800.0s)
[2025-11-24 23:51:13] 2025-11-24 22:50:30,442 | INFO     | monitor loop #5244: job 0:6893848770 is in state 'finished'
[2025-11-24 23:51:13] 2025-11-24 22:50:30,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:51:13] 2025-11-24 22:50:30,946 | INFO     | time since job start (78064s) is within the limit (172800.0s)
[2025-11-24 23:51:13] 2025-11-24 22:50:32,948 | INFO     | monitor loop #5245: job 0:6893848770 is in state 'finished'
[2025-11-24 23:51:13] 2025-11-24 22:50:32,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:51:13] 2025-11-24 22:50:32,957 | INFO     | time since job start (78066s) is within the limit (172800.0s)
[2025-11-24 23:51:13] 2025-11-24 22:50:34,963 | INFO     | time since job start (78068s) is within the limit (172800.0s)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,450 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 23:51:13] 2025-11-24 22:50:35,451 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 23:51:13] 2025-11-24 22:50:35,453 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6893848770/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,454 | INFO     | extracted standard info from prmon json
[2025-11-24 23:51:13] 2025-11-24 22:50:35,454 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:51:13] 2025-11-24 22:50:35,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:51:13] 2025-11-24 22:50:35,492 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:51:13] 2025-11-24 22:50:35,495 | INFO     | sum of square deviations: 635169180954.2745
[2025-11-24 23:51:13] 2025-11-24 22:50:35,509 | INFO     | monitor loop #5246: job 0:6893848770 is in state 'finished'
[2025-11-24 23:51:13] 2025-11-24 22:50:35,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,570 | INFO     | sum of deviations: 2332046822604.9297
[2025-11-24 23:51:13] 2025-11-24 22:50:35,570 | INFO     | mean x: 1763985795.5503938
[2025-11-24 23:51:13] 2025-11-24 22:50:35,570 | INFO     | mean y: 2814802.837007874
[2025-11-24 23:51:13] 2025-11-24 22:50:35,571 | INFO     | intersect: -6473723406.169181
[2025-11-24 23:51:13] 2025-11-24 22:50:35,572 | INFO     | chi2: 30.798789662734933
[2025-11-24 23:51:13] 2025-11-24 22:50:35,574 | INFO     | sum of square deviations: 627697084921.2369
[2025-11-24 23:51:13] 2025-11-24 22:50:35,619 | INFO     | sum of deviations: 2744280567199.099
[2025-11-24 23:51:13] 2025-11-24 22:50:35,619 | INFO     | mean x: 1763985643.0545454
[2025-11-24 23:51:13] 2025-11-24 22:50:35,619 | INFO     | mean y: 2823214.766798419
[2025-11-24 23:51:13] 2025-11-24 22:50:35,619 | INFO     | intersect: -7709290856.402141
[2025-11-24 23:51:13] 2025-11-24 22:50:35,621 | INFO     | chi2: 27.54806977975812
[2025-11-24 23:51:13] 2025-11-24 22:50:35,621 | INFO     | current chi2=27.54806977975812 (change=10.554700098848462 %)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,621 | INFO     | right removable region: 1264
[2025-11-24 23:51:13] 2025-11-24 22:50:35,623 | INFO     | sum of square deviations: 627696271181.2369
[2025-11-24 23:51:13] 2025-11-24 22:50:35,674 | INFO     | sum of deviations: 1793473879953.6934
[2025-11-24 23:51:13] 2025-11-24 22:50:35,674 | INFO     | mean x: 1763985948.0545454
[2025-11-24 23:51:13] 2025-11-24 22:50:35,674 | INFO     | mean y: 2825793.4972332017
[2025-11-24 23:51:13] 2025-11-24 22:50:35,675 | INFO     | intersect: -5037291326.344194
[2025-11-24 23:51:13] 2025-11-24 22:50:35,676 | INFO     | chi2: 25.870572525714117
[2025-11-24 23:51:13] 2025-11-24 22:50:35,676 | INFO     | current chi2=25.870572525714117 (change=16.001333789372 %)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,677 | INFO     | left removable region: 10
[2025-11-24 23:51:13] 2025-11-24 22:50:35,678 | INFO     | sum of square deviations: 611463629580.3964
[2025-11-24 23:51:13] 2025-11-24 22:50:35,729 | INFO     | sum of deviations: 1811688621794.658
[2025-11-24 23:51:13] 2025-11-24 22:50:35,730 | INFO     | mean x: 1763985917.5637958
[2025-11-24 23:51:13] 2025-11-24 22:50:35,730 | INFO     | mean y: 2846218.5167464116
[2025-11-24 23:51:13] 2025-11-24 22:50:35,730 | INFO     | intersect: -5223618711.293359
[2025-11-24 23:51:13] 2025-11-24 22:50:35,731 | INFO     | chi2: 17.921486956642156
[2025-11-24 23:51:13] 2025-11-24 22:50:35,732 | INFO     | current memory leak: 2.96 B/s (using 1254 data points, chi2=17.92)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,733 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | ..............................
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . Timing measurements:
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . get job = 0 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . initial setup = 12 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . payload setup = 163 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . stage-in = 0 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . payload execution = 77589 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . stage-out = 5 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | . log creation = 2 s
[2025-11-24 23:51:13] 2025-11-24 22:50:35,734 | INFO     | ..............................
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | 
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | job summary report
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | --------------------------------------------------
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | PanDA job id: 6893848770
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | task id: 47523449
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | errors: (none)
[2025-11-24 23:51:13] 2025-11-24 22:50:36,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | pilot state: finished 
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | transexitcode: 0
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | exeerrorcode: 0
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | exeerrordiag: 
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | exitcode: 0
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | exitmsg: OK
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | cpuconsumptiontime: 339665 s
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | nevents: 1000
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | neventsw: 0
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | pid: 6827
[2025-11-24 23:51:13] 2025-11-24 22:50:36,335 | INFO     | pgrp: 6827
[2025-11-24 23:51:13] 2025-11-24 22:50:36,336 | INFO     | corecount: 8
[2025-11-24 23:51:13] 2025-11-24 22:50:36,336 | INFO     | event service: False
[2025-11-24 23:51:13] 2025-11-24 22:50:36,336 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2298863, 34: 2298891, 44: 2298919, 55: 2299075, 66: 2299103, 77: 2299131, 87: 2299187, 97: 2299477, 98: 2299785, 7
[2025-11-24 23:51:13] 2025-11-24 22:50:36,336 | INFO     | --------------------------------------------------
[2025-11-24 23:51:13] 2025-11-24 22:50:36,336 | INFO     | 
[2025-11-24 23:51:13] 2025-11-24 22:50:36,336 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-24 23:51:13] 2025-11-24 22:50:36,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:51:13] 2025-11-24 22:50:36,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:51:13] 2025-11-24 22:50:36,790 | INFO     | job 6893848770 has completed (purged errors)
[2025-11-24 23:51:13] 2025-11-24 22:50:36,790 | INFO     | overall cleanup function is called
[2025-11-24 23:51:13] 2025-11-24 22:50:37,816 | INFO     | --- collectZombieJob: --- 10, [6827]
[2025-11-24 23:51:13] 2025-11-24 22:50:37,816 | INFO     | zombie collector waiting for pid 6827
[2025-11-24 23:51:13] 2025-11-24 22:50:37,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:51:13] 2025-11-24 22:50:37,816 | INFO     | collected zombie processes
[2025-11-24 23:51:13] 2025-11-24 22:50:37,816 | INFO     | will attempt to kill all subprocesses of pid=6827
[2025-11-24 23:51:13] 2025-11-24 22:50:37,895 | INFO     | process IDs to be killed: [6827] (in reverse order)
[2025-11-24 23:51:13] 2025-11-24 22:50:38,820 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:51:13] 2025-11-24 22:50:38,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:51:13] 2025-11-24 22:50:38,823 | INFO     | did not find any defunct processes belonging to 6827
[2025-11-24 23:51:13] 2025-11-24 22:50:38,825 | INFO     | did not find any defunct processes belonging to 6827
[2025-11-24 23:51:13] 2025-11-24 22:50:38,884 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:51:13] 2025-11-24 22:50:38,884 | INFO     | ready for new job
[2025-11-24 23:51:13] 2025-11-24 22:50:38,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:51:13] 2025-11-24 22:50:38,890 | INFO     | ***************************************
[2025-11-24 23:51:13] 2025-11-24 22:50:38,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:51:13] 2025-11-24 22:50:38,890 | INFO     | ***************************************
[2025-11-24 23:51:13] 2025-11-24 22:50:38,890 | INFO     | 
[2025-11-24 23:51:13] 2025-11-24 22:50:38,891 | INFO     | pilot is running in a VM
[2025-11-24 23:51:13] 2025-11-24 22:50:38,891 | INFO     | architecture information:
[2025-11-24 23:51:13] 2025-11-24 22:50:38,900 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:51:13] 2025-11-24 22:50:39,248 | INFO     | cat /etc/os-release:
[2025-11-24 23:51:13] NAME="CentOS Linux"
[2025-11-24 23:51:13] VERSION="7 (Core)"
[2025-11-24 23:51:13] ID="centos"
[2025-11-24 23:51:13] ID_LIKE="rhel fedora"
[2025-11-24 23:51:13] VERSION_ID="7"
[2025-11-24 23:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:51:13] ANSI_COLOR="0;31"
[2025-11-24 23:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:51:13] HOME_URL="https://www.centos.org/"
[2025-11-24 23:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:51:13] 
[2025-11-24 23:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:51:13] 
[2025-11-24 23:51:13] 2025-11-24 22:50:39,248 | INFO     | ***************************************
[2025-11-24 23:51:13] 2025-11-24 22:50:39,752 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-24 23:51:13] 2025-11-24 22:50:39,985 | INFO     | sufficient remaining disk space (493221838848 B)
[2025-11-24 23:51:13] 2025-11-24 22:50:39,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:51:13] 2025-11-24 22:50:39,985 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:51:13] 2025-11-24 22:50:39,985 | INFO     | update_server=False
[2025-11-24 23:51:13] 2025-11-24 22:50:39,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:51:13] 2025-11-24 22:50:39,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:51:13] 2025-11-24 22:50:39,986 | INFO     | aborting loop
[2025-11-24 23:51:13] 2025-11-24 22:50:39,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:51:13] 2025-11-24 22:50:40,223 | INFO     | all job control threads have been joined
[2025-11-24 23:51:13] 2025-11-24 22:50:40,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:51:13] 2025-11-24 22:50:40,992 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:40,992 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,057 | INFO     | all data control threads have been joined
[2025-11-24 23:51:13] 2025-11-24 22:50:41,087 | INFO     | [job] validate thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,140 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,178 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,229 | INFO     | [job] control thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,276 | INFO     | all payload control threads have been joined
[2025-11-24 23:51:13] 2025-11-24 22:50:41,587 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,713 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,733 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,746 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:51:13] 2025-11-24 22:50:41,901 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:41,993 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:42,063 | INFO     | [data] control thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:42,282 | INFO     | [payload] control thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:42,318 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:43,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:51:13] 2025-11-24 22:50:47,228 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:51:13] 2025-11-24 22:50:48,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617551075136)>', '<ExcThread(monitor, started 140617262806784)>']
[2025-11-24 23:51:13] 2025-11-24 22:50:53,266 | INFO     | all workflow threads have been joined
[2025-11-24 23:51:13] 2025-11-24 22:50:53,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:51:13] 2025-11-24 22:50:53,266 | INFO     | traces error code: 0
[2025-11-24 23:51:13] 2025-11-24 22:50:53,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:51:13] 2025-11-24 22:51:08,093 | INFO     | PID=32610 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 23:51:13] 2025-11-24 22:51:08,094 | INFO     | .. there are 2 such processes running
[2025-11-24 23:51:13] 2025-11-24 22:51:08,095 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:51:13] 2025-11-24 22:51:08,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:51:13] 2025-11-24 22:51:08,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:51:13] 2025-11-24 22:51:08,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:51:13] 2025-11-24 22:51:08,096 | INFO     | [monitor] control thread has ended
[2025-11-24 23:51:13] 2025-11-24 22:51:08,448 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:51:13] 2025-11-24 22:51:08,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:51:13] 2025-11-24 22:51:08,662 [wrapper] pilotpid: 32610
[2025-11-24 23:51:13] 2025-11-24 22:51:08,793 [wrapper] Pilot exit status: 0
[2025-11-24 23:51:13] 2025-11-24 22:51:09,269 [wrapper] pandaids: 6893848770
[2025-11-24 23:51:13] 2025-11-24 22:51:10,137 [wrapper] cleanup supervisor_pilot 11198 32611
[2025-11-24 23:51:13] 2025-11-24 22:51:10,225 [wrapper] Test setup, not cleaning
[2025-11-24 23:51:13] 2025-11-24 22:51:10,334 [wrapper] apfmon messages muted
[2025-11-24 23:51:13] 2025-11-24 22:51:10,451 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:51:13] 2025-11-24 22:51:10,582 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:51:13]  *** Error codes and diagnostics ***
[2025-11-24 23:51:13]     "exeErrorCode": 0,
[2025-11-24 23:51:13]     "exeErrorDiag": "",
[2025-11-24 23:51:13]     "pilotErrorCode": 0,
[2025-11-24 23:51:13]     "pilotErrorDiag": "",
[2025-11-24 23:51:13]  *** Listing of results directory ***
[2025-11-24 23:51:13] total 1322724
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:57 pilot3.tar.gz
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:59 queuedata.json
[2025-11-24 23:51:13] -rwx------. 1 boinc boinc     36292 Nov 20 11:59 runpilot2-wrapper.sh
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:51:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:04 run_atlas
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:04 job.xml
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc      6391 Nov 24 02:04 init_data.xml
[2025-11-24 23:51:13] -rw-r--r--. 2 boinc boinc 409161752 Nov 24 02:04 EVNT.47493127._000294.pool.root.1
[2025-11-24 23:51:13] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:04 start_atlas.sh
[2025-11-24 23:51:13] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:04 shared
[2025-11-24 23:51:13] -rw-r--r--. 2 boinc boinc    590101 Nov 24 02:04 input.tar.gz
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:04 boinc_lockfile
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc      2786 Nov 24 02:05 pandaJob.out
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc    989786 Nov 24 02:09 agis_schedconf.cvmfs.json
[2025-11-24 23:51:13] drwx------. 5 boinc boinc      4096 Nov 24 02:09 pilot3
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc       533 Nov 24 23:17 boinc_task_state.xml
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc 915863079 Nov 24 23:47 HITS.47523449._002933.pool.root.1
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc      1032 Nov 24 23:48 memory_monitor_summary.json
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc   1516227 Nov 24 23:48 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc   2392923 Nov 24 23:48 log.47523449._002933.job.log.tgz.1
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc      8631 Nov 24 23:50 heartbeat.json
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc        29 Nov 24 23:51 wrapper_checkpoint.txt
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc      8192 Nov 24 23:51 boinc_mmap_file
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc        95 Nov 24 23:51 pilot_heartbeat.json
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc       820 Nov 24 23:51 pilotlog.txt
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc  10376337 Nov 24 23:51 log.47523449._002933.job.log.1
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc       353 Nov 24 23:51 output.list
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc       620 Nov 24 23:51 runtime_log
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc  12789760 Nov 24 23:51 result.tar.gz
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc      8817 Nov 24 23:51 runtime_log.err
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc       662 Nov 24 23:51 LqHMDmeYHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkZHKDmvqIjHo.diag
[2025-11-24 23:51:13] -rw-r--r--. 1 boinc boinc     21373 Nov 24 23:51 stderr.txt
[2025-11-24 23:51:13] HITS file was successfully produced:
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc 915863079 Nov 24 23:47 shared/HITS.pool.root.1
[2025-11-24 23:51:13]  *** Contents of shared directory: ***
[2025-11-24 23:51:13] total 1307064
[2025-11-24 23:51:13] -rw-r--r--. 2 boinc boinc 409161752 Nov 24 02:04 ATLAS.root_0
[2025-11-24 23:51:13] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:04 start_atlas.sh
[2025-11-24 23:51:13] -rw-r--r--. 2 boinc boinc    590101 Nov 24 02:04 input.tar.gz
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc 915863079 Nov 24 23:47 HITS.pool.root.1
[2025-11-24 23:51:13] -rw-------. 1 boinc boinc  12789760 Nov 24 23:51 result.tar.gz
23:51:14 (28802): run_atlas exited; CPU time 339865.529849
23:51:14 (28802): called boinc_finish(0)

</stderr_txt>
]]>

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